RNA–Protein interactions for RNA: ENST00000513868.6

PVT1-203, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,699 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-203ENST00000513868 KCNA4P22459 653 aa12.83□□□□□ -0.35
PVT1-203ENST00000513868 MC4RP32245 332 aa12.83□□□□□ -0.35
PVT1-203ENST00000513868 DLX2Q07687 328 aaPredicted RBP12.83□□□□□ -0.35
PVT1-203ENST00000513868 FCHO2Q0JRZ9 810 aa12.83□□□□□ -0.35
PVT1-203ENST00000513868 BST1Q10588 318 aa12.83□□□□□ -0.35
PVT1-203ENST00000513868 CHI3L2Q15782 390 aa12.83□□□□□ -0.35
PVT1-203ENST00000513868 PSAPL1Q6NUJ1 521 aa12.83□□□□□ -0.35
PVT1-203ENST00000513868 LCA5Q86VQ0 697 aa12.83□□□□□ -0.35
PVT1-203ENST00000513868 PIANPQ8IYJ0 282 aa12.83□□□□□ -0.35
PVT1-203ENST00000513868 TNS4Q8IZW8 715 aa12.83□□□□□ -0.35
PVT1-203ENST00000513868 CCDC63Q8NA47 563 aa12.83□□□□□ -0.35
PVT1-203ENST00000513868 OR6Y1Q8NGX8 325 aa12.83□□□□□ -0.35
PVT1-203ENST00000513868 RAB3IL1Q8TBN0 382 aa12.83□□□□□ -0.35
PVT1-203ENST00000513868 SCG3Q8WXD2 468 aaKnown RBP12.83□□□□□ -0.35
PVT1-203ENST00000513868 E2F7Q96AV8 911 aa12.83□□□□□ -0.35
PVT1-203ENST00000513868 ZNF641Q96N77 438 aaPredicted RBP12.83□□□□□ -0.35
PVT1-203ENST00000513868 MYADMQ96S97 322 aa12.83□□□□□ -0.35
PVT1-203ENST00000513868 C19orf43Q9BQ61 176 aa12.83□□□□□ -0.35
PVT1-203ENST00000513868 TSSK1BQ9BXA7 367 aa12.83□□□□□ -0.35
PVT1-203ENST00000513868 GPR63Q9BZJ6 419 aa12.83□□□□□ -0.35
PVT1-203ENST00000513868 C20orf27Q9GZN8 174 aa12.83□□□□□ -0.35
PVT1-203ENST00000513868 ZDHHC6Q9H6R6 413 aa12.83□□□□□ -0.35
PVT1-203ENST00000513868 ECT2Q9H8V3 914 aa12.83□□□□□ -0.35
PVT1-203ENST00000513868 NMRAL1Q9HBL8 299 aa12.83□□□□□ -0.35
PVT1-203ENST00000513868 MTF2Q9Y483 593 aaPredicted RBP12.83□□□□□ -0.35
PVT1-203ENST00000513868 TICRRQ7Z2Z1 1910 aa12.83□□□□□ -0.36
PVT1-203ENST00000513868 PLXNA2O75051 1894 aa12.83□□□□□ -0.36
PVT1-203ENST00000513868 PRRT4C9JH25 899 aa12.83□□□□□ -0.36
PVT1-203ENST00000513868 GAPDHSO14556 408 aaPredicted RBP12.83□□□□□ -0.36
PVT1-203ENST00000513868 SNNO75324 88 aaPredicted RBP12.83□□□□□ -0.36
PVT1-203ENST00000513868 KLHL2O95198 593 aa12.83□□□□□ -0.36
PVT1-203ENST00000513868 CLDN7O95471 211 aa12.83□□□□□ -0.36
PVT1-203ENST00000513868 SRPRAP08240 638 aaKnown RBP12.83□□□□□ -0.36
PVT1-203ENST00000513868 DLDP09622 509 aaKnown RBP12.83□□□□□ -0.36
PVT1-203ENST00000513868 HOXB8P17481 243 aaPredicted RBP12.83□□□□□ -0.36
PVT1-203ENST00000513868 TAF1BQ53T94 588 aaPredicted RBP12.83□□□□□ -0.36
PVT1-203ENST00000513868 TMEM207Q6UWW9 146 aa12.83□□□□□ -0.36
PVT1-203ENST00000513868 SDCCAG8Q86SQ7 713 aaPredicted RBP12.83□□□□□ -0.36
PVT1-203ENST00000513868 C10orf107Q8IVU9 208 aa12.83□□□□□ -0.36
PVT1-203ENST00000513868 TRIM42Q8IWZ5 723 aa12.83□□□□□ -0.36
PVT1-203ENST00000513868 WFIKKN2Q8TEU8 576 aa12.83□□□□□ -0.36
PVT1-203ENST00000513868 LPGAT1Q92604 370 aa12.83□□□□□ -0.36
PVT1-203ENST00000513868 NXNL1Q96CM4 212 aa12.83□□□□□ -0.36
PVT1-203ENST00000513868 SCRN2Q96FV2 425 aa12.83□□□□□ -0.36
PVT1-203ENST00000513868 UBXN10Q96LJ8 280 aa12.83□□□□□ -0.36
PVT1-203ENST00000513868 MCCC1Q96RQ3 725 aaPredicted RBP12.83□□□□□ -0.36
PVT1-203ENST00000513868 TCF12Q99081 682 aa12.83□□□□□ -0.36
PVT1-203ENST00000513868 ZNF395Q9H8N7 513 aaPredicted RBP12.83□□□□□ -0.36
PVT1-203ENST00000513868 ZFYVE1Q9HBF4 777 aa12.83□□□□□ -0.36
PVT1-203ENST00000513868 ZFP14Q9HCL3 533 aa12.83□□□□□ -0.36
PVT1-203ENST00000513868 IGSF5Q9NSI5 407 aa12.83□□□□□ -0.36
PVT1-203ENST00000513868 INTS10Q9NVR2 710 aaKnown RBP12.83□□□□□ -0.36
PVT1-203ENST00000513868 CORO1CQ9ULV4 474 aaPredicted RBP12.83□□□□□ -0.36
PVT1-203ENST00000513868 RUVBL2Q9Y230 463 aaKnown RBP12.83□□□□□ -0.36
PVT1-203ENST00000513868 WASF2Q9Y6W5 498 aa12.83□□□□□ -0.36
PVT1-203ENST00000513868 A0A087X1B8 175 aa12.82□□□□□ -0.36
PVT1-203ENST00000513868 C1orf232A0A0U1RR37 186 aa12.82□□□□□ -0.36
PVT1-203ENST00000513868 NPIPB15A6NHN6 443 aaPredicted RBP12.82□□□□□ -0.36
PVT1-203ENST00000513868 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.82□□□□□ -0.36
PVT1-203ENST00000513868 TBX10O75333 385 aa12.82□□□□□ -0.36
PVT1-203ENST00000513868 ASLP04424 464 aa12.82□□□□□ -0.36
PVT1-203ENST00000513868 UGT2B4P06133 528 aa12.82□□□□□ -0.36
PVT1-203ENST00000513868 CPA3P15088 417 aa12.82□□□□□ -0.36
PVT1-203ENST00000513868 FDXRP22570 491 aa12.82□□□□□ -0.36
PVT1-203ENST00000513868 CA5AP35218 305 aa12.82□□□□□ -0.36
PVT1-203ENST00000513868 SUOXP51687 545 aa12.82□□□□□ -0.36
PVT1-203ENST00000513868 OCRLQ01968 901 aa12.82□□□□□ -0.36
PVT1-203ENST00000513868 ILF2Q12905 390 aaKnown RBP12.82□□□□□ -0.36
PVT1-203ENST00000513868 IFT88Q13099 833 aa12.82□□□□□ -0.36
PVT1-203ENST00000513868 PDGFRLQ15198 375 aa12.82□□□□□ -0.36
PVT1-203ENST00000513868 CTC1Q2NKJ3 1217 aa12.82□□□□□ -0.36
PVT1-203ENST00000513868 CRTC1Q6UUV9 634 aa12.82□□□□□ -0.36
PVT1-203ENST00000513868 ATG14Q6ZNE5 492 aa12.82□□□□□ -0.36
PVT1-203ENST00000513868 ZCCHC23Q6ZST2 131 aa12.82□□□□□ -0.36
PVT1-203ENST00000513868 TSPAN33Q86UF1 283 aa12.82□□□□□ -0.36
PVT1-203ENST00000513868 SPATS2Q86XZ4 545 aaKnown RBP12.82□□□□□ -0.36
PVT1-203ENST00000513868 PHTF2Q8N3S3 785 aa12.82□□□□□ -0.36
PVT1-203ENST00000513868 SPATA6LQ8N4H0 392 aa12.82□□□□□ -0.36
PVT1-203ENST00000513868 NXPE3Q969Y0 559 aa12.82□□□□□ -0.36
PVT1-203ENST00000513868 THOC1Q96FV9 657 aaKnown RBP12.82□□□□□ -0.36
PVT1-203ENST00000513868 CIPCQ9C0C6 399 aa12.82□□□□□ -0.36
PVT1-203ENST00000513868 MTG2Q9H4K7 406 aa12.82□□□□□ -0.36
PVT1-203ENST00000513868 FAM96AQ9H5X1 160 aa12.82□□□□□ -0.36
PVT1-203ENST00000513868 ELOVL2Q9NXB9 296 aa12.82□□□□□ -0.36
PVT1-203ENST00000513868 MED16Q9Y2X0 877 aa12.82□□□□□ -0.36
PVT1-203ENST00000513868 PKP3Q9Y446 797 aa12.82□□□□□ -0.36
PVT1-203ENST00000513868 A8MX80 341 aa12.81□□□□□ -0.36
PVT1-203ENST00000513868 TK2O00142 265 aa12.81□□□□□ -0.36
PVT1-203ENST00000513868 GPR39O43194 453 aa12.81□□□□□ -0.36
PVT1-203ENST00000513868 CTSLP07711 333 aa12.81□□□□□ -0.36
PVT1-203ENST00000513868 NEFHP12036 1026 aa12.81□□□□□ -0.36
PVT1-203ENST00000513868 PMLP29590 882 aa12.81□□□□□ -0.36
PVT1-203ENST00000513868 SLC12A2P55011 1212 aa12.81□□□□□ -0.36
PVT1-203ENST00000513868 SEMG2Q02383 582 aa12.81□□□□□ -0.36
PVT1-203ENST00000513868 RAD51Q06609 339 aa12.81□□□□□ -0.36
PVT1-203ENST00000513868 OVGP1Q12889 678 aa12.81□□□□□ -0.36
PVT1-203ENST00000513868 SETMARQ53H47 684 aaPredicted RBP12.81□□□□□ -0.36
PVT1-203ENST00000513868 ATAT1Q5SQI0 421 aa12.81□□□□□ -0.36
PVT1-203ENST00000513868 ATG16L1Q676U5 607 aa12.81□□□□□ -0.36
PVT1-203ENST00000513868 NAIF1Q69YI7 327 aaPredicted RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms