RNA–Protein interactions for RNA: ENST00000513452.5

CLDND1-227, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-227ENST00000513452 LUZP4Q9P127 313 aa10.48□□□□□ -0.73
CLDND1-227ENST00000513452 MAP10Q9P2G4 905 aa10.48□□□□□ -0.73
CLDND1-227ENST00000513452 KLHL3Q9UH77 587 aa10.48□□□□□ -0.73
CLDND1-227ENST00000513452 TRBV23OR9-2A0A075B6M9 112 aa10.47□□□□□ -0.73
CLDND1-227ENST00000513452 PIPSLA2A3N6 862 aa10.47□□□□□ -0.73
CLDND1-227ENST00000513452 CFAP69A5D8W1 941 aa10.47□□□□□ -0.73
CLDND1-227ENST00000513452 HSP90AA1P07900 732 aaKnown RBP10.47□□□□□ -0.73
CLDND1-227ENST00000513452 PNMA6AP0CW24 399 aaPredicted RBP10.47□□□□□ -0.73
CLDND1-227ENST00000513452 CD44P16070 742 aaKnown RBP10.47□□□□□ -0.73
CLDND1-227ENST00000513452 ZNF28P17035 718 aa10.47□□□□□ -0.73
CLDND1-227ENST00000513452 SERPINA4P29622 427 aa10.47□□□□□ -0.73
CLDND1-227ENST00000513452 ADRA1BP35368 520 aa10.47□□□□□ -0.73
CLDND1-227ENST00000513452 ADCY8P40145 1251 aa10.47□□□□□ -0.73
CLDND1-227ENST00000513452 MAPK9P45984 424 aa10.47□□□□□ -0.73
CLDND1-227ENST00000513452 PEX6Q13608 980 aa10.47□□□□□ -0.73
CLDND1-227ENST00000513452 CYTH1Q15438 398 aa10.47□□□□□ -0.73
CLDND1-227ENST00000513452 INPP5JQ15735 1006 aaPredicted RBP10.47□□□□□ -0.73
CLDND1-227ENST00000513452 CDO1Q16878 200 aa10.47□□□□□ -0.73
CLDND1-227ENST00000513452 ISM2Q6H9L7 571 aa10.47□□□□□ -0.73
CLDND1-227ENST00000513452 TTI2Q6NXR4 508 aa10.47□□□□□ -0.73
CLDND1-227ENST00000513452 DOK6Q6PKX4 331 aa10.47□□□□□ -0.73
CLDND1-227ENST00000513452 WDR74Q6RFH5 385 aaPredicted RBP10.47□□□□□ -0.73
CLDND1-227ENST00000513452 C6orf15Q6UXA7 325 aaPredicted RBP10.47□□□□□ -0.73
CLDND1-227ENST00000513452 GALNT6Q8NCL4 622 aa10.47□□□□□ -0.73
CLDND1-227ENST00000513452 SLC37A2Q8TED4 501 aa10.47□□□□□ -0.73
CLDND1-227ENST00000513452 NCSTNQ92542 709 aa10.47□□□□□ -0.73
CLDND1-227ENST00000513452 SMARCE1Q969G3 411 aa10.47□□□□□ -0.73
CLDND1-227ENST00000513452 C18orf8Q96DM3 657 aa10.47□□□□□ -0.73
CLDND1-227ENST00000513452 NUS1Q96E22 293 aa10.47□□□□□ -0.73
CLDND1-227ENST00000513452 STAMBPL1Q96FJ0 436 aa10.47□□□□□ -0.73
CLDND1-227ENST00000513452 DHTKD1Q96HY7 919 aaPredicted RBP10.47□□□□□ -0.73
CLDND1-227ENST00000513452 FAM81BQ96LP2 452 aa10.47□□□□□ -0.73
CLDND1-227ENST00000513452 SLC29A3Q9BZD2 475 aa10.47□□□□□ -0.73
CLDND1-227ENST00000513452 PDCL3Q9H2J4 239 aa10.47□□□□□ -0.73
CLDND1-227ENST00000513452 RETREG1Q9H6L5 497 aa10.47□□□□□ -0.73
CLDND1-227ENST00000513452 UBA2Q9UBT2 640 aaPredicted RBP10.47□□□□□ -0.73
CLDND1-227ENST00000513452 APEX2Q9UBZ4 518 aa10.47□□□□□ -0.73
CLDND1-227ENST00000513452 PLEKHM1Q9Y4G2 1056 aa10.47□□□□□ -0.73
CLDND1-227ENST00000513452 TNRC6AQ8NDV7 1962 aaKnown RBP10.46□□□□□ -0.73
CLDND1-227ENST00000513452 A6NCN8 305 aa10.46□□□□□ -0.73
CLDND1-227ENST00000513452 GOLGA6CA6NDK9 693 aa10.46□□□□□ -0.73
CLDND1-227ENST00000513452 GOLGA6BA6NDN3 693 aa10.46□□□□□ -0.73
CLDND1-227ENST00000513452 RASA4BC9J798 803 aa10.46□□□□□ -0.73
CLDND1-227ENST00000513452 RASA4O43374 803 aa10.46□□□□□ -0.73
CLDND1-227ENST00000513452 SMC2O95347 1197 aa10.46□□□□□ -0.73
CLDND1-227ENST00000513452 MAP3K6O95382 1288 aa10.46□□□□□ -0.73
CLDND1-227ENST00000513452 PLEKP08567 350 aaPredicted RBP10.46□□□□□ -0.73
CLDND1-227ENST00000513452 GOLGA6DP0CG33 693 aa10.46□□□□□ -0.73
CLDND1-227ENST00000513452 SLC9A1P19634 815 aa10.46□□□□□ -0.73
CLDND1-227ENST00000513452 ERCC5P28715 1186 aaPredicted RBP10.46□□□□□ -0.73
CLDND1-227ENST00000513452 GRNP28799 593 aaKnown RBP10.46□□□□□ -0.73
CLDND1-227ENST00000513452 CASP14P31944 242 aa10.46□□□□□ -0.73
CLDND1-227ENST00000513452 RGRP47804 291 aa10.46□□□□□ -0.73
CLDND1-227ENST00000513452 GABRB2P47870 512 aa10.46□□□□□ -0.73
CLDND1-227ENST00000513452 FASLGP48023 281 aa10.46□□□□□ -0.73
CLDND1-227ENST00000513452 POLD2P49005 469 aa10.46□□□□□ -0.73
CLDND1-227ENST00000513452 CDK3Q00526 305 aa10.46□□□□□ -0.73
CLDND1-227ENST00000513452 FOXM1Q08050 763 aa10.46□□□□□ -0.73
CLDND1-227ENST00000513452 NFATC2Q13469 925 aa10.46□□□□□ -0.73
CLDND1-227ENST00000513452 SEMA5AQ13591 1074 aa10.46□□□□□ -0.73
CLDND1-227ENST00000513452 C15orf59Q2T9L4 293 aaPredicted RBP10.46□□□□□ -0.73
CLDND1-227ENST00000513452 AFMIDQ63HM1 303 aa10.46□□□□□ -0.73
CLDND1-227ENST00000513452 CPZQ66K79 652 aa10.46□□□□□ -0.73
CLDND1-227ENST00000513452 DPPA4Q7L190 304 aa10.46□□□□□ -0.73
CLDND1-227ENST00000513452 APLFQ8IW19 511 aaPredicted RBP10.46□□□□□ -0.73
CLDND1-227ENST00000513452 EMC1Q8N766 993 aa10.46□□□□□ -0.73
CLDND1-227ENST00000513452 RTL3Q8N8U3 475 aaKnown RBP10.46□□□□□ -0.73
CLDND1-227ENST00000513452 TMEM35BQ8NCS4 154 aa10.46□□□□□ -0.73
CLDND1-227ENST00000513452 MOCOSQ96EN8 888 aa10.46□□□□□ -0.73
CLDND1-227ENST00000513452 TUBGCP5Q96RT8 1024 aa10.46□□□□□ -0.73
CLDND1-227ENST00000513452 SLC25A23Q9BV35 468 aa10.46□□□□□ -0.73
CLDND1-227ENST00000513452 TEX101Q9BY14 249 aa10.46□□□□□ -0.73
CLDND1-227ENST00000513452 ATP13A3Q9H7F0 1226 aa10.46□□□□□ -0.73
CLDND1-227ENST00000513452 METTL5Q9NRN9 209 aaKnown RBP10.46□□□□□ -0.73
CLDND1-227ENST00000513452 GOLGA6AQ9NYA3 693 aa10.46□□□□□ -0.73
CLDND1-227ENST00000513452 KCND3Q9UK17 655 aa10.46□□□□□ -0.73
CLDND1-227ENST00000513452 TMEM59LQ9UK28 342 aa10.46□□□□□ -0.73
CLDND1-227ENST00000513452 AJAP1Q9UKB5 411 aaPredicted RBP10.46□□□□□ -0.73
CLDND1-227ENST00000513452 CTNND2Q9UQB3 1225 aa10.46□□□□□ -0.73
CLDND1-227ENST00000513452 F8P00451 2351 aa10.46□□□□□ -0.74
CLDND1-227ENST00000513452 CREG1O75629 220 aa10.45□□□□□ -0.74
CLDND1-227ENST00000513452 CLCN1P35523 988 aa10.45□□□□□ -0.74
CLDND1-227ENST00000513452 MARSP56192 900 aaKnown RBP10.45□□□□□ -0.74
CLDND1-227ENST00000513452 CHAF1BQ13112 559 aa10.45□□□□□ -0.74
CLDND1-227ENST00000513452 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.45□□□□□ -0.74
CLDND1-227ENST00000513452 DENND2CQ68D51 928 aa10.45□□□□□ -0.74
CLDND1-227ENST00000513452 CCDC185Q8N715 623 aa10.45□□□□□ -0.74
CLDND1-227ENST00000513452 NELFBQ8WX92 580 aa10.45□□□□□ -0.74
CLDND1-227ENST00000513452 COQ10AQ96MF6 247 aa10.45□□□□□ -0.74
CLDND1-227ENST00000513452 OR2M4Q96R27 311 aa10.45□□□□□ -0.74
CLDND1-227ENST00000513452 SIDT1Q9NXL6 827 aaKnown RBP10.45□□□□□ -0.74
CLDND1-227ENST00000513452 SLC5A6Q9Y289 635 aa10.45□□□□□ -0.74
CLDND1-227ENST00000513452 ITPR3Q14573 2671 aa10.45□□□□□ -0.74
CLDND1-227ENST00000513452 KIAA0754O94854 1291 aa10.44□□□□□ -0.74
CLDND1-227ENST00000513452 EML2O95834 649 aa10.44□□□□□ -0.74
CLDND1-227ENST00000513452 GNA14O95837 355 aa10.44□□□□□ -0.74
CLDND1-227ENST00000513452 IVLP07476 585 aa10.44□□□□□ -0.74
CLDND1-227ENST00000513452 PRF1P14222 555 aa10.44□□□□□ -0.74
CLDND1-227ENST00000513452 EPHB2P29323 1055 aa10.44□□□□□ -0.74
CLDND1-227ENST00000513452 CDH5P33151 784 aaPredicted RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms