RNA–Protein interactions for RNA: ENST00000512928.1

KDM3B-208, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-208ENST00000512928 ARHGAP6O43182 974 aa6.5□□□□□ -1.37
KDM3B-208ENST00000512928 OPA1O60313 960 aa6.5□□□□□ -1.37
KDM3B-208ENST00000512928 CST8O60676 142 aa6.5□□□□□ -1.37
KDM3B-208ENST00000512928 DKK1O94907 266 aa6.5□□□□□ -1.37
KDM3B-208ENST00000512928 MT-CO3P00414 261 aa6.5□□□□□ -1.37
KDM3B-208ENST00000512928 TRBC1P01850 177 aa6.5□□□□□ -1.37
KDM3B-208ENST00000512928 PRB1P04280 392 aa6.5□□□□□ -1.37
KDM3B-208ENST00000512928 CAPNS1P04632 268 aa6.5□□□□□ -1.37
KDM3B-208ENST00000512928 GIMD1P0DJR0 217 aa6.5□□□□□ -1.37
KDM3B-208ENST00000512928 MYCLP1P12525 358 aaPredicted RBP6.5□□□□□ -1.37
KDM3B-208ENST00000512928 CES1P23141 567 aa6.5□□□□□ -1.37
KDM3B-208ENST00000512928 CTNNA2P26232 953 aa6.5□□□□□ -1.37
KDM3B-208ENST00000512928 TNNT3P45378 269 aaPredicted RBP6.5□□□□□ -1.37
KDM3B-208ENST00000512928 GPR1P46091 355 aa6.5□□□□□ -1.37
KDM3B-208ENST00000512928 GNPDA1P46926 289 aa6.5□□□□□ -1.37
KDM3B-208ENST00000512928 MARCKSL1P49006 195 aa6.5□□□□□ -1.37
KDM3B-208ENST00000512928 PPM1FP49593 454 aaPredicted RBP6.5□□□□□ -1.37
KDM3B-208ENST00000512928 KIAA1024LP59773 190 aa6.5□□□□□ -1.37
KDM3B-208ENST00000512928 IFI35P80217 286 aaPredicted RBP6.5□□□□□ -1.37
KDM3B-208ENST00000512928 INSM1Q01101 510 aaPredicted RBP6.5□□□□□ -1.37
KDM3B-208ENST00000512928 PPIDQ08752 370 aaKnown RBP6.5□□□□□ -1.37
KDM3B-208ENST00000512928 NIPAL4Q0D2K0 466 aa6.5□□□□□ -1.37
KDM3B-208ENST00000512928 BIRC2Q13490 618 aa6.5□□□□□ -1.37
KDM3B-208ENST00000512928 TFDP2Q14188 446 aa6.5□□□□□ -1.37
KDM3B-208ENST00000512928 AGERQ15109 404 aa6.5□□□□□ -1.37
KDM3B-208ENST00000512928 SOWAHCQ53LP3 525 aaPredicted RBP6.5□□□□□ -1.37
KDM3B-208ENST00000512928 C6orf132Q5T0Z8 1188 aa6.5□□□□□ -1.37
KDM3B-208ENST00000512928 LRRC38Q5VT99 294 aa6.5□□□□□ -1.37
KDM3B-208ENST00000512928 KCTD16Q68DU8 428 aa6.5□□□□□ -1.37
KDM3B-208ENST00000512928 SLC9A4Q6AI14 798 aa6.5□□□□□ -1.37
KDM3B-208ENST00000512928 FOXR1Q6PIV2 292 aa6.5□□□□□ -1.37
KDM3B-208ENST00000512928 SPOCD1Q6ZMY3 1216 aa6.5□□□□□ -1.37
KDM3B-208ENST00000512928 Q6ZVL8 140 aa6.5□□□□□ -1.37
KDM3B-208ENST00000512928 MARK2Q7KZI7 788 aaKnown RBP6.5□□□□□ -1.37
KDM3B-208ENST00000512928 ZC3H18Q86VM9 953 aaKnown RBP6.5□□□□□ -1.37
KDM3B-208ENST00000512928 HEATR4Q86WZ0 1026 aa6.5□□□□□ -1.37
KDM3B-208ENST00000512928 PROSER1Q86XN7 944 aa6.5□□□□□ -1.37
KDM3B-208ENST00000512928 SLC35F3Q8IY50 421 aa6.5□□□□□ -1.37
KDM3B-208ENST00000512928 PELI3Q8N2H9 469 aa6.5□□□□□ -1.37
KDM3B-208ENST00000512928 KYQ8NBH2 561 aa6.5□□□□□ -1.37
KDM3B-208ENST00000512928 PIH1D2Q8WWB5 315 aa6.5□□□□□ -1.37
KDM3B-208ENST00000512928 OR1E3Q8WZA6 343 aa6.5□□□□□ -1.37
KDM3B-208ENST00000512928 P3H4Q92791 437 aa6.5□□□□□ -1.37
KDM3B-208ENST00000512928 AP2M1Q96CW1 435 aa6.5□□□□□ -1.37
KDM3B-208ENST00000512928 DTD2Q96FN9 168 aa6.5□□□□□ -1.37
KDM3B-208ENST00000512928 RBM41Q96IZ5 413 aaKnown RBP6.5□□□□□ -1.37
KDM3B-208ENST00000512928 COQ10AQ96MF6 247 aa6.5□□□□□ -1.37
KDM3B-208ENST00000512928 DEPDC7Q96QD5 511 aa6.5□□□□□ -1.37
KDM3B-208ENST00000512928 RBM15Q96T37 977 aaKnown RBP eCLIP6.5□□□□□ -1.37
KDM3B-208ENST00000512928 BAG1Q99933 345 aaPredicted RBP6.5□□□□□ -1.37
KDM3B-208ENST00000512928 HEMGNQ9BXL5 484 aa6.5□□□□□ -1.37
KDM3B-208ENST00000512928 ADGRE3Q9BY15 652 aa6.5□□□□□ -1.37
KDM3B-208ENST00000512928 CLPBQ9H078 707 aa6.5□□□□□ -1.37
KDM3B-208ENST00000512928 DPEP2Q9H4A9 486 aa6.5□□□□□ -1.37
KDM3B-208ENST00000512928 CARS2Q9HA77 564 aaKnown RBP6.5□□□□□ -1.37
KDM3B-208ENST00000512928 USP29Q9HBJ7 922 aa6.5□□□□□ -1.37
KDM3B-208ENST00000512928 FGF22Q9HCT0 170 aa6.5□□□□□ -1.37
KDM3B-208ENST00000512928 WDR70Q9NW82 654 aa6.5□□□□□ -1.37
KDM3B-208ENST00000512928 AMACRQ9UHK6 382 aa6.5□□□□□ -1.37
KDM3B-208ENST00000512928 SALL4Q9UJQ4 1053 aa6.5□□□□□ -1.37
KDM3B-208ENST00000512928 RAXQ9Y2V3 346 aa6.5□□□□□ -1.37
KDM3B-208ENST00000512928 ADGRG1Q9Y653 693 aa6.5□□□□□ -1.37
KDM3B-208ENST00000512928 ALG6Q9Y672 507 aa6.5□□□□□ -1.37
KDM3B-208ENST00000512928 EPN1Q9Y6I3 576 aaPredicted RBP6.5□□□□□ -1.37
KDM3B-208ENST00000512928 FREM2Q5SZK8 3169 aa6.5□□□□□ -1.37
KDM3B-208ENST00000512928 ATRXP46100 2492 aa6.5□□□□□ -1.37
KDM3B-208ENST00000512928 ITPR1Q14643 2758 aa6.49□□□□□ -1.37
KDM3B-208ENST00000512928 LY6G6EA0A0G2JKS1 128 aa6.49□□□□□ -1.37
KDM3B-208ENST00000512928 PRSS38A1L453 326 aa6.49□□□□□ -1.37
KDM3B-208ENST00000512928 ZNF487B1APH4 448 aa6.49□□□□□ -1.37
KDM3B-208ENST00000512928 PSMD11O00231 422 aa6.49□□□□□ -1.37
KDM3B-208ENST00000512928 AGRPO00253 132 aa6.49□□□□□ -1.37
KDM3B-208ENST00000512928 FZD6O60353 706 aa6.49□□□□□ -1.37
KDM3B-208ENST00000512928 USP12O75317 370 aa6.49□□□□□ -1.37
KDM3B-208ENST00000512928 CSO75390 466 aaKnown RBP6.49□□□□□ -1.37
KDM3B-208ENST00000512928 PMPCBO75439 489 aa6.49□□□□□ -1.37
KDM3B-208ENST00000512928 ZRANB2O95218 330 aaKnown RBP eCLIP6.49□□□□□ -1.37
KDM3B-208ENST00000512928 CLDN7O95471 211 aa6.49□□□□□ -1.37
KDM3B-208ENST00000512928 ASMTLO95671 621 aa6.49□□□□□ -1.37
KDM3B-208ENST00000512928 GP1BAP07359 652 aa6.49□□□□□ -1.37
KDM3B-208ENST00000512928 PIRTP0C851 137 aa6.49□□□□□ -1.37
KDM3B-208ENST00000512928 PECAM1P16284 738 aaPredicted RBP6.49□□□□□ -1.37
KDM3B-208ENST00000512928 GM2AP17900 193 aa6.49□□□□□ -1.37
KDM3B-208ENST00000512928 TGM2P21980 687 aa6.49□□□□□ -1.37
KDM3B-208ENST00000512928 CDKN2BP42772 138 aa6.49□□□□□ -1.37
KDM3B-208ENST00000512928 POLD2P49005 469 aa6.49□□□□□ -1.37
KDM3B-208ENST00000512928 SKOR1P84550 965 aa6.49□□□□□ -1.37
KDM3B-208ENST00000512928 CDK3Q00526 305 aa6.49□□□□□ -1.37
KDM3B-208ENST00000512928 ILF3Q12906 894 aaKnown RBP eCLIP6.49□□□□□ -1.37
KDM3B-208ENST00000512928 COL28A1Q2UY09 1125 aa6.49□□□□□ -1.37
KDM3B-208ENST00000512928 TFDP3Q5H9I0 405 aa6.49□□□□□ -1.37
KDM3B-208ENST00000512928 PERM1Q5SV97 790 aa6.49□□□□□ -1.37
KDM3B-208ENST00000512928 ALS2CLQ60I27 953 aa6.49□□□□□ -1.37
KDM3B-208ENST00000512928 CCDC70Q6NSX1 233 aa6.49□□□□□ -1.37
KDM3B-208ENST00000512928 C11orf63Q6NUN7 778 aa6.49□□□□□ -1.37
KDM3B-208ENST00000512928 SLC30A9Q6PML9 568 aa6.49□□□□□ -1.37
KDM3B-208ENST00000512928 RFLNAQ6ZTI6 216 aa6.49□□□□□ -1.37
KDM3B-208ENST00000512928 BZW1Q7L1Q6 419 aaKnown RBP6.49□□□□□ -1.37
KDM3B-208ENST00000512928 TRIM74Q86UV6 250 aa6.49□□□□□ -1.37
KDM3B-208ENST00000512928 NT5DC3Q86UY8 548 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms