RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 BIRC2Q13490 618 aa12.56□□□□□ -0.4
VEGFA-216ENST00000512683 DPYSQ14117 519 aa12.56□□□□□ -0.4
VEGFA-216ENST00000512683 TGIF1Q15583 401 aa12.56□□□□□ -0.4
VEGFA-216ENST00000512683 PHF19Q5T6S3 580 aa12.56□□□□□ -0.4
VEGFA-216ENST00000512683 ATG14Q6ZNE5 492 aa12.56□□□□□ -0.4
VEGFA-216ENST00000512683 AGBL5Q8NDL9 886 aa12.56□□□□□ -0.4
VEGFA-216ENST00000512683 OR4D9Q8NGE8 314 aa12.56□□□□□ -0.4
VEGFA-216ENST00000512683 ZDHHC1Q8WTX9 485 aa12.56□□□□□ -0.4
VEGFA-216ENST00000512683 NUS1Q96E22 293 aa12.56□□□□□ -0.4
VEGFA-216ENST00000512683 KCTD15Q96SI1 283 aaPredicted RBP12.56□□□□□ -0.4
VEGFA-216ENST00000512683 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.56□□□□□ -0.4
VEGFA-216ENST00000512683 SNRNP25Q9BV90 132 aaKnown RBP12.56□□□□□ -0.4
VEGFA-216ENST00000512683 LGR4Q9BXB1 951 aa12.56□□□□□ -0.4
VEGFA-216ENST00000512683 FRMD8Q9BZ67 464 aaPredicted RBP12.56□□□□□ -0.4
VEGFA-216ENST00000512683 ADNPQ9H2P0 1102 aa12.56□□□□□ -0.4
VEGFA-216ENST00000512683 CARS2Q9HA77 564 aaKnown RBP12.56□□□□□ -0.4
VEGFA-216ENST00000512683 MRPL40Q9NQ50 206 aaKnown RBP12.56□□□□□ -0.4
VEGFA-216ENST00000512683 SPATS2LQ9NUQ6 558 aaKnown RBP12.56□□□□□ -0.4
VEGFA-216ENST00000512683 HAUS2Q9NVX0 235 aa12.56□□□□□ -0.4
VEGFA-216ENST00000512683 GEMIN8Q9NWZ8 242 aaKnown RBP12.56□□□□□ -0.4
VEGFA-216ENST00000512683 CWC15Q9P013 229 aaKnown RBP12.56□□□□□ -0.4
VEGFA-216ENST00000512683 TAAR2Q9P1P5 351 aa12.56□□□□□ -0.4
VEGFA-216ENST00000512683 CNOT8Q9UFF9 292 aaKnown RBP12.56□□□□□ -0.4
VEGFA-216ENST00000512683 IL17BQ9UHF5 180 aa12.56□□□□□ -0.4
VEGFA-216ENST00000512683 PCSK1NQ9UHG2 260 aa12.56□□□□□ -0.4
VEGFA-216ENST00000512683 DNPEPQ9ULA0 475 aa12.56□□□□□ -0.4
VEGFA-216ENST00000512683 PIEZO2Q9H5I5 2752 aa12.56□□□□□ -0.4
VEGFA-216ENST00000512683 A0A1W2PQJ5 194 aa12.55□□□□□ -0.4
VEGFA-216ENST00000512683 C9orf172C9J069 976 aa12.55□□□□□ -0.4
VEGFA-216ENST00000512683 LRCH4O75427 683 aa12.55□□□□□ -0.4
VEGFA-216ENST00000512683 PRKCGP05129 697 aa12.55□□□□□ -0.4
VEGFA-216ENST00000512683 ITGB6P18564 788 aa12.55□□□□□ -0.4
VEGFA-216ENST00000512683 CD1CP29017 333 aa12.55□□□□□ -0.4
VEGFA-216ENST00000512683 SERPINB6P35237 376 aa12.55□□□□□ -0.4
VEGFA-216ENST00000512683 ATP1A2P50993 1020 aa12.55□□□□□ -0.4
VEGFA-216ENST00000512683 CDH6P55285 790 aa12.55□□□□□ -0.4
VEGFA-216ENST00000512683 GPLD1P80108 840 aa12.55□□□□□ -0.4
VEGFA-216ENST00000512683 SLC10A7Q0GE19 358 aa12.55□□□□□ -0.4
VEGFA-216ENST00000512683 LRP8Q14114 963 aa12.55□□□□□ -0.4
VEGFA-216ENST00000512683 ZNF235Q14590 738 aa12.55□□□□□ -0.4
VEGFA-216ENST00000512683 DPYSL2Q16555 572 aa12.55□□□□□ -0.4
VEGFA-216ENST00000512683 MAP9Q49MG5 647 aa12.55□□□□□ -0.4
VEGFA-216ENST00000512683 PPP6R3Q5H9R7 873 aaPredicted RBP12.55□□□□□ -0.4
VEGFA-216ENST00000512683 NRROSQ86YC3 692 aa12.55□□□□□ -0.4
VEGFA-216ENST00000512683 ZNF653Q96CK0 615 aa12.55□□□□□ -0.4
VEGFA-216ENST00000512683 DTD2Q96FN9 168 aa12.55□□□□□ -0.4
VEGFA-216ENST00000512683 TEFMQ96QE5 360 aaKnown RBP12.55□□□□□ -0.4
VEGFA-216ENST00000512683 MCCC1Q96RQ3 725 aaPredicted RBP12.55□□□□□ -0.4
VEGFA-216ENST00000512683 MGME1Q9BQP7 344 aa12.55□□□□□ -0.4
VEGFA-216ENST00000512683 DDA1Q9BW61 102 aa12.55□□□□□ -0.4
VEGFA-216ENST00000512683 SEMA6CQ9H3T2 930 aa12.55□□□□□ -0.4
VEGFA-216ENST00000512683 PDP2Q9P2J9 529 aa12.55□□□□□ -0.4
VEGFA-216ENST00000512683 MOSPD1Q9UJG1 213 aa12.55□□□□□ -0.4
VEGFA-216ENST00000512683 PCDHGA4Q9Y5G9 962 aa12.55□□□□□ -0.4
VEGFA-216ENST00000512683 RP1P56715 2156 aa12.54□□□□□ -0.4
VEGFA-216ENST00000512683 LRP4O75096 1905 aa12.54□□□□□ -0.4
VEGFA-216ENST00000512683 B4E171 279 aa12.54□□□□□ -0.4
VEGFA-216ENST00000512683 SUV39H1O43463 412 aa12.54□□□□□ -0.4
VEGFA-216ENST00000512683 MAFKO60675 156 aa12.54□□□□□ -0.4
VEGFA-216ENST00000512683 ECEL1O95672 775 aa12.54□□□□□ -0.4
VEGFA-216ENST00000512683 PEX11BO96011 259 aa12.54□□□□□ -0.4
VEGFA-216ENST00000512683 CPP00450 1065 aa12.54□□□□□ -0.4
VEGFA-216ENST00000512683 ZNF30P17039 623 aa12.54□□□□□ -0.4
VEGFA-216ENST00000512683 ITIH1P19827 911 aa12.54□□□□□ -0.4
VEGFA-216ENST00000512683 ALDH4A1P30038 563 aa12.54□□□□□ -0.4
VEGFA-216ENST00000512683 MAN1A1P33908 653 aa12.54□□□□□ -0.4
VEGFA-216ENST00000512683 TSPAN7P41732 249 aa12.54□□□□□ -0.4
VEGFA-216ENST00000512683 MAPK10P53779 464 aa12.54□□□□□ -0.4
VEGFA-216ENST00000512683 UBASH3AP57075 661 aa12.54□□□□□ -0.4
VEGFA-216ENST00000512683 OR1D5P58170 312 aa12.54□□□□□ -0.4
VEGFA-216ENST00000512683 RAB15P59190 212 aa12.54□□□□□ -0.4
VEGFA-216ENST00000512683 CDK3Q00526 305 aa12.54□□□□□ -0.4
VEGFA-216ENST00000512683 NFATC3Q12968 1075 aa12.54□□□□□ -0.4
VEGFA-216ENST00000512683 PIGHQ14442 188 aaPredicted RBP12.54□□□□□ -0.4
VEGFA-216ENST00000512683 C16orf72Q14CZ0 275 aa12.54□□□□□ -0.4
VEGFA-216ENST00000512683 CNGA3Q16281 694 aa12.54□□□□□ -0.4
VEGFA-216ENST00000512683 TBR1Q16650 682 aa12.54□□□□□ -0.4
VEGFA-216ENST00000512683 ARMC12Q5T9G4 340 aa12.54□□□□□ -0.4
VEGFA-216ENST00000512683 MARC1Q5VT66 337 aa12.54□□□□□ -0.4
VEGFA-216ENST00000512683 KCTD16Q68DU8 428 aa12.54□□□□□ -0.4
VEGFA-216ENST00000512683 TMEM71Q6P5X7 295 aa12.54□□□□□ -0.4
VEGFA-216ENST00000512683 TMCO3Q6UWJ1 677 aa12.54□□□□□ -0.4
VEGFA-216ENST00000512683 ADAMTSL4Q6UY14 1074 aa12.54□□□□□ -0.4
VEGFA-216ENST00000512683 ZNF574Q6ZN55 896 aaPredicted RBP12.54□□□□□ -0.4
VEGFA-216ENST00000512683 USP45Q70EL2 814 aa12.54□□□□□ -0.4
VEGFA-216ENST00000512683 ZNF765Q7L2R6 523 aa12.54□□□□□ -0.4
VEGFA-216ENST00000512683 TECPR1Q7Z6L1 1165 aa12.54□□□□□ -0.4
VEGFA-216ENST00000512683 HEATR4Q86WZ0 1026 aa12.54□□□□□ -0.4
VEGFA-216ENST00000512683 ZFAND4Q86XD8 727 aa12.54□□□□□ -0.4
VEGFA-216ENST00000512683 NPWQ8N729 165 aa12.54□□□□□ -0.4
VEGFA-216ENST00000512683 CCL4L1Q8NHW4 92 aa12.54□□□□□ -0.4
VEGFA-216ENST00000512683 SYN2Q92777 582 aaPredicted RBP12.54□□□□□ -0.4
VEGFA-216ENST00000512683 EXTL1Q92935 676 aa12.54□□□□□ -0.4
VEGFA-216ENST00000512683 CATSPER2Q96P56 530 aa12.54□□□□□ -0.4
VEGFA-216ENST00000512683 ZPBPQ9BS86 351 aa12.54□□□□□ -0.4
VEGFA-216ENST00000512683 EFHD1Q9BUP0 239 aa12.54□□□□□ -0.4
VEGFA-216ENST00000512683 NOD2Q9HC29 1040 aa12.54□□□□□ -0.4
VEGFA-216ENST00000512683 WDR70Q9NW82 654 aa12.54□□□□□ -0.4
VEGFA-216ENST00000512683 MYO1AQ9UBC5 1043 aa12.54□□□□□ -0.4
VEGFA-216ENST00000512683 AMACRQ9UHK6 382 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms