RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 ZNF143P52747 638 aaPredicted RBP7.25□□□□□ -1.25
USP46-208ENST00000512656 HDAC4P56524 1084 aa7.25□□□□□ -1.25
USP46-208ENST00000512656 JAM2P57087 298 aa7.25□□□□□ -1.25
USP46-208ENST00000512656 TMPRSS3P57727 454 aa7.25□□□□□ -1.25
USP46-208ENST00000512656 CXADRP78310 365 aa7.25□□□□□ -1.25
USP46-208ENST00000512656 RHDQ02161 417 aa7.25□□□□□ -1.25
USP46-208ENST00000512656 PPARDQ03181 441 aa7.25□□□□□ -1.25
USP46-208ENST00000512656 PTP4A2Q12974 167 aa7.25□□□□□ -1.25
USP46-208ENST00000512656 SERINC3Q13530 473 aa7.25□□□□□ -1.25
USP46-208ENST00000512656 ELOCQ15369 112 aa7.25□□□□□ -1.25
USP46-208ENST00000512656 NFKBIBQ15653 356 aa7.25□□□□□ -1.25
USP46-208ENST00000512656 CLEC16AQ2KHT3 1053 aa7.25□□□□□ -1.25
USP46-208ENST00000512656 ISXQ2M1V0 245 aa7.25□□□□□ -1.25
USP46-208ENST00000512656 SPRED3Q2MJR0 410 aa7.25□□□□□ -1.25
USP46-208ENST00000512656 DEFB133Q30KQ1 61 aa7.25□□□□□ -1.25
USP46-208ENST00000512656 RPS26P11Q5JNZ5 115 aaPredicted RBP7.25□□□□□ -1.25
USP46-208ENST00000512656 CFAP58Q5T655 872 aa7.25□□□□□ -1.25
USP46-208ENST00000512656 ATXN7L2Q5T6C5 722 aaPredicted RBP7.25□□□□□ -1.25
USP46-208ENST00000512656 FAXCQ5TGI0 409 aa7.25□□□□□ -1.25
USP46-208ENST00000512656 FAM72AQ5TYM5 149 aa7.25□□□□□ -1.25
USP46-208ENST00000512656 CDKAL1Q5VV42 579 aa7.25□□□□□ -1.25
USP46-208ENST00000512656 FAM72DQ6L9T8 149 aa7.25□□□□□ -1.25
USP46-208ENST00000512656 PPP1R2P3Q6NXS1 205 aa7.25□□□□□ -1.25
USP46-208ENST00000512656 ERAP2Q6P179 960 aa7.25□□□□□ -1.25
USP46-208ENST00000512656 DNAJC24Q6P3W2 148 aa7.25□□□□□ -1.25
USP46-208ENST00000512656 DCUN1D2Q6PH85 259 aa7.25□□□□□ -1.25
USP46-208ENST00000512656 WDR59Q6PJI9 974 aa7.25□□□□□ -1.25
USP46-208ENST00000512656 LEKR1Q6ZMV7 388 aa7.25□□□□□ -1.25
USP46-208ENST00000512656 MACC1Q6ZN28 852 aa7.25□□□□□ -1.25
USP46-208ENST00000512656 ZAR1Q86SH2 424 aa7.25□□□□□ -1.25
USP46-208ENST00000512656 PHLDB2Q86SQ0 1253 aa7.25□□□□□ -1.25
USP46-208ENST00000512656 FAM72BQ86X60 149 aa7.25□□□□□ -1.25
USP46-208ENST00000512656 PHACTR4Q8IZ21 702 aa7.25□□□□□ -1.25
USP46-208ENST00000512656 SDR16C5Q8N3Y7 309 aa7.25□□□□□ -1.25
USP46-208ENST00000512656 CCDC185Q8N715 623 aa7.25□□□□□ -1.25
USP46-208ENST00000512656 FBLIM1Q8WUP2 373 aa7.25□□□□□ -1.25
USP46-208ENST00000512656 KCNE4Q8WWG9 221 aa7.25□□□□□ -1.25
USP46-208ENST00000512656 CENPTQ96BT3 561 aa7.25□□□□□ -1.25
USP46-208ENST00000512656 HIC2Q96JB3 615 aa7.25□□□□□ -1.25
USP46-208ENST00000512656 CNPY3Q9BT09 278 aa7.25□□□□□ -1.25
USP46-208ENST00000512656 BOCQ9BWV1 1114 aa7.25□□□□□ -1.25
USP46-208ENST00000512656 CPEB1Q9BZB8 566 aaKnown RBP7.25□□□□□ -1.25
USP46-208ENST00000512656 GSX1Q9H4S2 264 aaPredicted RBP7.25□□□□□ -1.25
USP46-208ENST00000512656 SEPT11Q9NVA2 429 aaKnown RBP7.25□□□□□ -1.25
USP46-208ENST00000512656 ITM2BQ9Y287 266 aa7.25□□□□□ -1.25
USP46-208ENST00000512656 ACTL7AQ9Y615 435 aa7.25□□□□□ -1.25
USP46-208ENST00000512656 U3KQA8 63 aa7.25□□□□□ -1.25
USP46-208ENST00000512656 DOCK4Q8N1I0 1966 aa7.25□□□□□ -1.25
USP46-208ENST00000512656 TDRD6O60522 2096 aaKnown RBP7.24□□□□□ -1.25
USP46-208ENST00000512656 ARHGAP42A6NI28 874 aa7.24□□□□□ -1.25
USP46-208ENST00000512656 LGALS16A8MUM7 142 aa7.24□□□□□ -1.25
USP46-208ENST00000512656 EIF3CLB5ME19 914 aaKnown RBP7.24□□□□□ -1.25
USP46-208ENST00000512656 RASA4BC9J798 803 aa7.24□□□□□ -1.25
USP46-208ENST00000512656 YY2O15391 372 aa7.24□□□□□ -1.25
USP46-208ENST00000512656 RASA4O43374 803 aa7.24□□□□□ -1.25
USP46-208ENST00000512656 CREB3O43889 395 aa7.24□□□□□ -1.25
USP46-208ENST00000512656 MYF5P13349 255 aa7.24□□□□□ -1.25
USP46-208ENST00000512656 CTSEP14091 401 aa7.24□□□□□ -1.25
USP46-208ENST00000512656 CDK11BP21127 795 aaKnown RBP7.24□□□□□ -1.25
USP46-208ENST00000512656 TGM2P21980 687 aa7.24□□□□□ -1.25
USP46-208ENST00000512656 IGFALSP35858 605 aa7.24□□□□□ -1.25
USP46-208ENST00000512656 EIF4A3P38919 411 aaKnown RBP7.24□□□□□ -1.25
USP46-208ENST00000512656 SERPINB4P48594 390 aa7.24□□□□□ -1.25
USP46-208ENST00000512656 KLK7P49862 253 aa7.24□□□□□ -1.25
USP46-208ENST00000512656 NDST2P52849 883 aa7.24□□□□□ -1.25
USP46-208ENST00000512656 COPB1P53618 953 aaKnown RBP7.24□□□□□ -1.25
USP46-208ENST00000512656 ADKP55263 362 aaKnown RBP7.24□□□□□ -1.25
USP46-208ENST00000512656 UBXN1Q04323 297 aa7.24□□□□□ -1.25
USP46-208ENST00000512656 EIF2B5Q13144 721 aaKnown RBP7.24□□□□□ -1.25
USP46-208ENST00000512656 SPIDRQ14159 915 aa7.24□□□□□ -1.25
USP46-208ENST00000512656 LRRC14Q15048 493 aa7.24□□□□□ -1.25
USP46-208ENST00000512656 KLHL40Q2TBA0 621 aa7.24□□□□□ -1.25
USP46-208ENST00000512656 TMEM52BQ4KMG9 183 aa7.24□□□□□ -1.25
USP46-208ENST00000512656 RAB6CQ53S08 254 aa7.24□□□□□ -1.25
USP46-208ENST00000512656 TAF1BQ53T94 588 aaPredicted RBP7.24□□□□□ -1.25
USP46-208ENST00000512656 C3orf38Q5JPI3 329 aa7.24□□□□□ -1.25
USP46-208ENST00000512656 GUSBP11Q6P575 273 aa7.24□□□□□ -1.25
USP46-208ENST00000512656 BRAT1Q6PJG6 821 aa7.24□□□□□ -1.25
USP46-208ENST00000512656 LVRNQ6Q4G3 990 aa7.24□□□□□ -1.25
USP46-208ENST00000512656 SASS6Q6UVJ0 657 aa7.24□□□□□ -1.25
USP46-208ENST00000512656 GKN2Q86XP6 184 aa7.24□□□□□ -1.25
USP46-208ENST00000512656 DNAAF5Q86Y56 855 aa7.24□□□□□ -1.25
USP46-208ENST00000512656 KRTAP1-3Q8IUG1 177 aa7.24□□□□□ -1.25
USP46-208ENST00000512656 UMODL1-AS1Q8N2C9 162 aa7.24□□□□□ -1.25
USP46-208ENST00000512656 ARL14Q8N4G2 192 aa7.24□□□□□ -1.25
USP46-208ENST00000512656 PAF1Q8N7H5 531 aa7.24□□□□□ -1.25
USP46-208ENST00000512656 OR6C4Q8NGE1 309 aa7.24□□□□□ -1.25
USP46-208ENST00000512656 WDR36Q8NI36 951 aaKnown RBP7.24□□□□□ -1.25
USP46-208ENST00000512656 HMCESQ96FZ2 354 aa7.24□□□□□ -1.25
USP46-208ENST00000512656 WBP1Q96G27 269 aa7.24□□□□□ -1.25
USP46-208ENST00000512656 NAF1Q96HR8 494 aaKnown RBP7.24□□□□□ -1.25
USP46-208ENST00000512656 VCPIP1Q96JH7 1222 aa7.24□□□□□ -1.25
USP46-208ENST00000512656 ZNF641Q96N77 438 aaPredicted RBP7.24□□□□□ -1.25
USP46-208ENST00000512656 EIF3CQ99613 913 aaKnown RBP7.24□□□□□ -1.25
USP46-208ENST00000512656 AGPAT1Q99943 283 aa7.24□□□□□ -1.25
USP46-208ENST00000512656 WRAP53Q9BUR4 548 aaKnown RBP7.24□□□□□ -1.25
USP46-208ENST00000512656 RAB6CQ9H0N0 254 aa7.24□□□□□ -1.25
USP46-208ENST00000512656 ANO10Q9NW15 660 aa7.24□□□□□ -1.25
USP46-208ENST00000512656 UBA2Q9UBT2 640 aaPredicted RBP7.24□□□□□ -1.25
USP46-208ENST00000512656 GGT7Q9UJ14 662 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms