RNA–Protein interactions for RNA: ENST00000511892.5

RNF4-217, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-217ENST00000511892 TRIM23P36406 574 aa5.84□□□□□ -1.47
RNF4-217ENST00000511892 HSPA9P38646 679 aaKnown RBP5.84□□□□□ -1.47
RNF4-217ENST00000511892 MAGEA1P43355 309 aa5.84□□□□□ -1.47
RNF4-217ENST00000511892 RENBPP51606 427 aa5.84□□□□□ -1.47
RNF4-217ENST00000511892 HK3P52790 923 aa5.84□□□□□ -1.47
RNF4-217ENST00000511892 CDH6P55285 790 aa5.84□□□□□ -1.47
RNF4-217ENST00000511892 AP1S1P61966 158 aa5.84□□□□□ -1.47
RNF4-217ENST00000511892 PPARDQ03181 441 aa5.84□□□□□ -1.47
RNF4-217ENST00000511892 CKAP4Q07065 602 aaKnown RBP5.84□□□□□ -1.47
RNF4-217ENST00000511892 GALNT2Q10471 571 aa5.84□□□□□ -1.47
RNF4-217ENST00000511892 SLC10A2Q12908 348 aaPredicted RBP5.84□□□□□ -1.47
RNF4-217ENST00000511892 MTM1Q13496 603 aa5.84□□□□□ -1.47
RNF4-217ENST00000511892 KRT81Q14533 505 aa5.84□□□□□ -1.47
RNF4-217ENST00000511892 ZNF235Q14590 738 aa5.84□□□□□ -1.47
RNF4-217ENST00000511892 NFATC4Q14934 902 aa5.84□□□□□ -1.47
RNF4-217ENST00000511892 PAFAH1B3Q15102 231 aaKnown RBP5.84□□□□□ -1.47
RNF4-217ENST00000511892 PTPRRQ15256 657 aa5.84□□□□□ -1.47
RNF4-217ENST00000511892 CDKN3Q16667 212 aa5.84□□□□□ -1.47
RNF4-217ENST00000511892 COL28A1Q2UY09 1125 aa5.84□□□□□ -1.47
RNF4-217ENST00000511892 ANKRD20A8PQ5CZ79 823 aa5.84□□□□□ -1.47
RNF4-217ENST00000511892 PRRT3Q5FWE3 981 aa5.84□□□□□ -1.47
RNF4-217ENST00000511892 CFAP58Q5T655 872 aa5.84□□□□□ -1.47
RNF4-217ENST00000511892 FAXCQ5TGI0 409 aa5.84□□□□□ -1.47
RNF4-217ENST00000511892 PAPD7Q5XG87 772 aaKnown RBP5.84□□□□□ -1.47
RNF4-217ENST00000511892 NCBP2-AS2Q69YL0 99 aa5.84□□□□□ -1.47
RNF4-217ENST00000511892 ZCCHC8Q6NZY4 707 aaKnown RBP5.84□□□□□ -1.47
RNF4-217ENST00000511892 GUSBP11Q6P575 273 aa5.84□□□□□ -1.47
RNF4-217ENST00000511892 H2AFVQ71UI9 128 aa5.84□□□□□ -1.47
RNF4-217ENST00000511892 EFL1Q7Z2Z2 1120 aaKnown RBP5.84□□□□□ -1.47
RNF4-217ENST00000511892 SLC35F6Q8N357 371 aa5.84□□□□□ -1.47
RNF4-217ENST00000511892 ATPAF2Q8N5M1 289 aa5.84□□□□□ -1.47
RNF4-217ENST00000511892 TEX26Q8N6G2 289 aa5.84□□□□□ -1.47
RNF4-217ENST00000511892 PQLC3Q8N755 202 aa5.84□□□□□ -1.47
RNF4-217ENST00000511892 PCDH19Q8TAB3 1148 aa5.84□□□□□ -1.47
RNF4-217ENST00000511892 IFI44Q8TCB0 444 aa5.84□□□□□ -1.47
RNF4-217ENST00000511892 LRRN4Q8WUT4 740 aa5.84□□□□□ -1.47
RNF4-217ENST00000511892 BTN2A2Q8WVV5 523 aa5.84□□□□□ -1.47
RNF4-217ENST00000511892 ANKRD7Q92527 254 aa5.84□□□□□ -1.47
RNF4-217ENST00000511892 TSACCQ96A04 125 aaPredicted RBP5.84□□□□□ -1.47
RNF4-217ENST00000511892 FAF2Q96CS3 445 aa5.84□□□□□ -1.47
RNF4-217ENST00000511892 TBATAQ96M53 351 aa5.84□□□□□ -1.47
RNF4-217ENST00000511892 COQ10AQ96MF6 247 aa5.84□□□□□ -1.47
RNF4-217ENST00000511892 SMIM14Q96QK8 99 aa5.84□□□□□ -1.47
RNF4-217ENST00000511892 NUDCD1Q96RS6 583 aa5.84□□□□□ -1.47
RNF4-217ENST00000511892 WDR24Q96S15 920 aa5.84□□□□□ -1.47
RNF4-217ENST00000511892 IL12RB2Q99665 862 aa5.84□□□□□ -1.47
RNF4-217ENST00000511892 MGME1Q9BQP7 344 aa5.84□□□□□ -1.47
RNF4-217ENST00000511892 SLC13A1Q9BZW2 595 aa5.84□□□□□ -1.47
RNF4-217ENST00000511892 NRSN2Q9GZP1 204 aa5.84□□□□□ -1.47
RNF4-217ENST00000511892 USP29Q9HBJ7 922 aa5.84□□□□□ -1.47
RNF4-217ENST00000511892 RCOR3Q9P2K3 495 aaPredicted RBP5.84□□□□□ -1.47
RNF4-217ENST00000511892 UVRAGQ9P2Y5 699 aa5.84□□□□□ -1.47
RNF4-217ENST00000511892 SPASTQ9UBP0 616 aa5.84□□□□□ -1.47
RNF4-217ENST00000511892 RNF14Q9UBS8 474 aa5.84□□□□□ -1.47
RNF4-217ENST00000511892 B4GALT6Q9UBX8 382 aa5.84□□□□□ -1.47
RNF4-217ENST00000511892 APOBEC3BQ9UH17 382 aaKnown RBP5.84□□□□□ -1.47
RNF4-217ENST00000511892 AHCTF1Q8WYP5 2266 aa5.84□□□□□ -1.47
RNF4-217ENST00000511892 A0A087WV48 116 aa5.83□□□□□ -1.48
RNF4-217ENST00000511892 A0A0A6YYK5 440 aaPredicted RBP5.83□□□□□ -1.48
RNF4-217ENST00000511892 A0A0U1RQS6 177 aa5.83□□□□□ -1.48
RNF4-217ENST00000511892 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.83□□□□□ -1.48
RNF4-217ENST00000511892 A0A1W2PNU3 283 aaPredicted RBP5.83□□□□□ -1.48
RNF4-217ENST00000511892 CPED1A4D0V7 1026 aa5.83□□□□□ -1.48
RNF4-217ENST00000511892 FAM181BA6NEQ2 426 aa5.83□□□□□ -1.48
RNF4-217ENST00000511892 NPIPB15A6NHN6 443 aaPredicted RBP5.83□□□□□ -1.48
RNF4-217ENST00000511892 C3orf70A6NLC5 250 aaPredicted RBP5.83□□□□□ -1.48
RNF4-217ENST00000511892 TMEM110-MUSTN1A8MSY1 372 aa5.83□□□□□ -1.48
RNF4-217ENST00000511892 FZD6O60353 706 aa5.83□□□□□ -1.48
RNF4-217ENST00000511892 BRINP1O60477 761 aa5.83□□□□□ -1.48
RNF4-217ENST00000511892 SOCS5O75159 536 aa5.83□□□□□ -1.48
RNF4-217ENST00000511892 HEXIM1O94992 359 aaKnown RBP5.83□□□□□ -1.48
RNF4-217ENST00000511892 PGLSO95336 258 aa5.83□□□□□ -1.48
RNF4-217ENST00000511892 MAP3K6O95382 1288 aa5.83□□□□□ -1.48
RNF4-217ENST00000511892 CPP00450 1065 aa5.83□□□□□ -1.48
RNF4-217ENST00000511892 FUCA1P04066 466 aa5.83□□□□□ -1.48
RNF4-217ENST00000511892 PDHA1P08559 390 aa5.83□□□□□ -1.48
RNF4-217ENST00000511892 HOXC4P09017 264 aaPredicted RBP5.83□□□□□ -1.48
RNF4-217ENST00000511892 TMEM253P0C7T8 217 aa5.83□□□□□ -1.48
RNF4-217ENST00000511892 ELFN1P0C7U0 828 aa5.83□□□□□ -1.48
RNF4-217ENST00000511892 TCP1P17987 556 aaKnown RBP5.83□□□□□ -1.48
RNF4-217ENST00000511892 KDELR1P24390 212 aa5.83□□□□□ -1.48
RNF4-217ENST00000511892 VIPR1P32241 457 aa5.83□□□□□ -1.48
RNF4-217ENST00000511892 MAN1A1P33908 653 aa5.83□□□□□ -1.48
RNF4-217ENST00000511892 SERPINB6P35237 376 aa5.83□□□□□ -1.48
RNF4-217ENST00000511892 GJC1P36383 396 aa5.83□□□□□ -1.48
RNF4-217ENST00000511892 GARSP41250 739 aaKnown RBP5.83□□□□□ -1.48
RNF4-217ENST00000511892 SSR1P43307 286 aaKnown RBP5.83□□□□□ -1.48
RNF4-217ENST00000511892 MMP13P45452 471 aa5.83□□□□□ -1.48
RNF4-217ENST00000511892 DUSP3P51452 185 aaPredicted RBP5.83□□□□□ -1.48
RNF4-217ENST00000511892 KIAA1024LP59773 190 aa5.83□□□□□ -1.48
RNF4-217ENST00000511892 SRP54P61011 504 aaKnown RBP5.83□□□□□ -1.48
RNF4-217ENST00000511892 POLR2LP62875 67 aaKnown RBP5.83□□□□□ -1.48
RNF4-217ENST00000511892 GBE1Q04446 702 aa5.83□□□□□ -1.48
RNF4-217ENST00000511892 PDK2Q15119 407 aa5.83□□□□□ -1.48
RNF4-217ENST00000511892 NR0B2Q15466 257 aa5.83□□□□□ -1.48
RNF4-217ENST00000511892 TCEA2Q15560 299 aa5.83□□□□□ -1.48
RNF4-217ENST00000511892 CNGA3Q16281 694 aa5.83□□□□□ -1.48
RNF4-217ENST00000511892 HADHQ16836 314 aaKnown RBP5.83□□□□□ -1.48
RNF4-217ENST00000511892 RALGPS1Q5JS13 557 aa5.83□□□□□ -1.48
RNF4-217ENST00000511892 PERM1Q5SV97 790 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms