RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 PIRTP0C851 137 aa13.27□□□□□ -0.29
RNF4-215ENST00000511843 ZFXP17010 805 aaPredicted RBP13.27□□□□□ -0.29
RNF4-215ENST00000511843 POLD2P49005 469 aa13.27□□□□□ -0.29
RNF4-215ENST00000511843 NAP1L1P55209 391 aaKnown RBP13.27□□□□□ -0.29
RNF4-215ENST00000511843 PTSQ03393 145 aa13.27□□□□□ -0.29
RNF4-215ENST00000511843 CYP4F3Q08477 520 aa13.27□□□□□ -0.29
RNF4-215ENST00000511843 ILKQ13418 452 aa13.27□□□□□ -0.29
RNF4-215ENST00000511843 PRKD1Q15139 912 aaPredicted RBP13.27□□□□□ -0.29
RNF4-215ENST00000511843 PCSK7Q16549 785 aa13.27□□□□□ -0.29
RNF4-215ENST00000511843 QPCTQ16769 361 aa13.27□□□□□ -0.29
RNF4-215ENST00000511843 TFDP3Q5H9I0 405 aa13.27□□□□□ -0.29
RNF4-215ENST00000511843 C6orf132Q5T0Z8 1188 aa13.27□□□□□ -0.29
RNF4-215ENST00000511843 AADACL2Q6P093 401 aa13.27□□□□□ -0.29
RNF4-215ENST00000511843 DOK6Q6PKX4 331 aa13.27□□□□□ -0.29
RNF4-215ENST00000511843 EFL1Q7Z2Z2 1120 aaKnown RBP13.27□□□□□ -0.29
RNF4-215ENST00000511843 TECPR1Q7Z6L1 1165 aa13.27□□□□□ -0.29
RNF4-215ENST00000511843 TRIM74Q86UV6 250 aa13.27□□□□□ -0.29
RNF4-215ENST00000511843 ZC3H18Q86VM9 953 aaKnown RBP13.27□□□□□ -0.29
RNF4-215ENST00000511843 KATNAL2Q8IYT4 538 aa13.27□□□□□ -0.29
RNF4-215ENST00000511843 KYQ8NBH2 561 aa13.27□□□□□ -0.29
RNF4-215ENST00000511843 AGAP2Q99490 1192 aa13.27□□□□□ -0.29
RNF4-215ENST00000511843 BAG1Q99933 345 aaPredicted RBP13.27□□□□□ -0.29
RNF4-215ENST00000511843 BOCQ9BWV1 1114 aa13.27□□□□□ -0.29
RNF4-215ENST00000511843 TMEM168Q9H0V1 697 aa13.27□□□□□ -0.29
RNF4-215ENST00000511843 ABCG8Q9H221 673 aa13.27□□□□□ -0.29
RNF4-215ENST00000511843 CCDC86Q9H6F5 360 aaKnown RBP13.27□□□□□ -0.29
RNF4-215ENST00000511843 C10orf88Q9H8K7 445 aa13.27□□□□□ -0.29
RNF4-215ENST00000511843 LUC7LQ9NQ29 371 aaKnown RBP13.27□□□□□ -0.29
RNF4-215ENST00000511843 UBP1Q9NZI7 540 aa13.27□□□□□ -0.29
RNF4-215ENST00000511843 GULP1Q9UBP9 304 aa13.27□□□□□ -0.29
RNF4-215ENST00000511843 AMACRQ9UHK6 382 aa13.27□□□□□ -0.29
RNF4-215ENST00000511843 CFAP47Q6ZTR5 3102 aa13.26□□□□□ -0.29
RNF4-215ENST00000511843 C1orf232A0A0U1RR37 186 aa13.26□□□□□ -0.29
RNF4-215ENST00000511843 PRSS38A1L453 326 aa13.26□□□□□ -0.29
RNF4-215ENST00000511843 PSMD11O00231 422 aa13.26□□□□□ -0.29
RNF4-215ENST00000511843 TPP1O14773 563 aa13.26□□□□□ -0.29
RNF4-215ENST00000511843 ZRANB2O95218 330 aaKnown RBP eCLIP13.26□□□□□ -0.29
RNF4-215ENST00000511843 IPO7O95373 1038 aaKnown RBP13.26□□□□□ -0.29
RNF4-215ENST00000511843 MT-CYBP00156 380 aaPredicted RBP13.26□□□□□ -0.29
RNF4-215ENST00000511843 MT-CO3P00414 261 aa13.26□□□□□ -0.29
RNF4-215ENST00000511843 SLC4A1P02730 911 aa13.26□□□□□ -0.29
RNF4-215ENST00000511843 MYCLP1P12525 358 aaPredicted RBP13.26□□□□□ -0.29
RNF4-215ENST00000511843 TGM2P21980 687 aa13.26□□□□□ -0.29
RNF4-215ENST00000511843 CES1P23141 567 aa13.26□□□□□ -0.29
RNF4-215ENST00000511843 NFKBIAP25963 317 aa13.26□□□□□ -0.29
RNF4-215ENST00000511843 PTPN3P26045 913 aa13.26□□□□□ -0.29
RNF4-215ENST00000511843 BLKP51451 505 aa13.26□□□□□ -0.29
RNF4-215ENST00000511843 STC1P52823 247 aa13.26□□□□□ -0.29
RNF4-215ENST00000511843 CDK3Q00526 305 aa13.26□□□□□ -0.29
RNF4-215ENST00000511843 TFDP2Q14188 446 aa13.26□□□□□ -0.29
RNF4-215ENST00000511843 ELOCQ15369 112 aa13.26□□□□□ -0.29
RNF4-215ENST00000511843 NR0B2Q15466 257 aa13.26□□□□□ -0.29
RNF4-215ENST00000511843 KIAA1328Q86T90 577 aa13.26□□□□□ -0.29
RNF4-215ENST00000511843 RCOR2Q8IZ40 523 aa13.26□□□□□ -0.29
RNF4-215ENST00000511843 NDUFAF2Q8N183 169 aa13.26□□□□□ -0.29
RNF4-215ENST00000511843 FSTL5Q8N475 847 aaPredicted RBP13.26□□□□□ -0.29
RNF4-215ENST00000511843 ATL2Q8NHH9 583 aa13.26□□□□□ -0.29
RNF4-215ENST00000511843 MAPK15Q8TD08 544 aa13.26□□□□□ -0.29
RNF4-215ENST00000511843 P3H4Q92791 437 aa13.26□□□□□ -0.29
RNF4-215ENST00000511843 AP2M1Q96CW1 435 aa13.26□□□□□ -0.29
RNF4-215ENST00000511843 IMP4Q96G21 291 aaKnown RBP13.26□□□□□ -0.29
RNF4-215ENST00000511843 TBATAQ96M53 351 aa13.26□□□□□ -0.29
RNF4-215ENST00000511843 FAM118BQ9BPY3 351 aa13.26□□□□□ -0.29
RNF4-215ENST00000511843 TEX101Q9BY14 249 aa13.26□□□□□ -0.29
RNF4-215ENST00000511843 HAUS2Q9NVX0 235 aa13.26□□□□□ -0.29
RNF4-215ENST00000511843 GPR34Q9UPC5 381 aa13.26□□□□□ -0.29
RNF4-215ENST00000511843 CLCA2Q9UQC9 943 aa13.26□□□□□ -0.29
RNF4-215ENST00000511843 PCDHB1Q9Y5F3 818 aa13.26□□□□□ -0.29
RNF4-215ENST00000511843 DGKBQ9Y6T7 804 aa13.26□□□□□ -0.29
RNF4-215ENST00000511843 BPTFQ12830 3046 aa13.26□□□□□ -0.29
RNF4-215ENST00000511843 MACROD2A1Z1Q3 448 aa13.25□□□□□ -0.29
RNF4-215ENST00000511843 GRID2IPA4D2P6 1211 aa13.25□□□□□ -0.29
RNF4-215ENST00000511843 EME2A4GXA9 379 aaPredicted RBP13.25□□□□□ -0.29
RNF4-215ENST00000511843 INPP4BO15327 924 aa13.25□□□□□ -0.29
RNF4-215ENST00000511843 CEACAM5P06731 702 aa13.25□□□□□ -0.29
RNF4-215ENST00000511843 CDK4P11802 303 aa13.25□□□□□ -0.29
RNF4-215ENST00000511843 CA4P22748 312 aa13.25□□□□□ -0.29
RNF4-215ENST00000511843 KELP23276 732 aa13.25□□□□□ -0.29
RNF4-215ENST00000511843 GPR1P46091 355 aa13.25□□□□□ -0.29
RNF4-215ENST00000511843 DUSP3P51452 185 aaPredicted RBP13.25□□□□□ -0.29
RNF4-215ENST00000511843 VAV2P52735 878 aa13.25□□□□□ -0.29
RNF4-215ENST00000511843 E2F1Q01094 437 aa13.25□□□□□ -0.29
RNF4-215ENST00000511843 WASHC5Q12768 1159 aa13.25□□□□□ -0.29
RNF4-215ENST00000511843 LYSMD3Q7Z3D4 306 aa13.25□□□□□ -0.29
RNF4-215ENST00000511843 TAF8Q7Z7C8 310 aa13.25□□□□□ -0.29
RNF4-215ENST00000511843 NT5DC3Q86UY8 548 aa13.25□□□□□ -0.29
RNF4-215ENST00000511843 PROSER1Q86XN7 944 aa13.25□□□□□ -0.29
RNF4-215ENST00000511843 PDCD7Q8N8D1 485 aaKnown RBP13.25□□□□□ -0.29
RNF4-215ENST00000511843 DCBLD1Q8N8Z6 715 aa13.25□□□□□ -0.29
RNF4-215ENST00000511843 EXD1Q8NHP7 514 aa13.25□□□□□ -0.29
RNF4-215ENST00000511843 TFB1MQ8WVM0 346 aaKnown RBP13.25□□□□□ -0.29
RNF4-215ENST00000511843 ALG3Q92685 438 aa13.25□□□□□ -0.29
RNF4-215ENST00000511843 RBM41Q96IZ5 413 aaKnown RBP13.25□□□□□ -0.29
RNF4-215ENST00000511843 TRIB3Q96RU7 358 aa13.25□□□□□ -0.29
RNF4-215ENST00000511843 RIOK2Q9BVS4 552 aaKnown RBP13.25□□□□□ -0.29
RNF4-215ENST00000511843 FRMD8Q9BZ67 464 aaPredicted RBP13.25□□□□□ -0.29
RNF4-215ENST00000511843 ABCG4Q9H172 646 aa13.25□□□□□ -0.29
RNF4-215ENST00000511843 SYNDIG1Q9H7V2 258 aa13.25□□□□□ -0.29
RNF4-215ENST00000511843 CARS2Q9HA77 564 aaKnown RBP13.25□□□□□ -0.29
RNF4-215ENST00000511843 GLOD4Q9HC38 313 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms