RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 TGM1P22735 817 aa9.12□□□□□ -0.95
NR1I3-228ENST00000511676 CCNFP41002 786 aa9.12□□□□□ -0.95
NR1I3-228ENST00000511676 CHRNA4P43681 627 aa9.12□□□□□ -0.95
NR1I3-228ENST00000511676 SLCO1A2P46721 670 aa9.12□□□□□ -0.95
NR1I3-228ENST00000511676 DGKEP52429 567 aa9.12□□□□□ -0.95
NR1I3-228ENST00000511676 ZNF140P52738 457 aaPredicted RBP9.12□□□□□ -0.95
NR1I3-228ENST00000511676 ATXN3P54252 364 aaPredicted RBP9.12□□□□□ -0.95
NR1I3-228ENST00000511676 MRPS21P82921 87 aaKnown RBP9.12□□□□□ -0.95
NR1I3-228ENST00000511676 TRAF2Q12933 501 aa9.12□□□□□ -0.95
NR1I3-228ENST00000511676 THOC5Q13769 683 aaKnown RBP9.12□□□□□ -0.95
NR1I3-228ENST00000511676 DLG2Q15700 870 aa9.12□□□□□ -0.95
NR1I3-228ENST00000511676 DBN1Q16643 649 aa9.12□□□□□ -0.95
NR1I3-228ENST00000511676 AARS2Q5JTZ9 985 aaKnown RBP9.12□□□□□ -0.95
NR1I3-228ENST00000511676 TEDDM1Q5T9Z0 273 aa9.12□□□□□ -0.95
NR1I3-228ENST00000511676 KCTD16Q68DU8 428 aa9.12□□□□□ -0.95
NR1I3-228ENST00000511676 TRMT10BQ6PF06 316 aaKnown RBP9.12□□□□□ -0.95
NR1I3-228ENST00000511676 PACS1Q6VY07 963 aa9.12□□□□□ -0.95
NR1I3-228ENST00000511676 LEKR1Q6ZMV7 388 aa9.12□□□□□ -0.95
NR1I3-228ENST00000511676 CAPN12Q6ZSI9 719 aa9.12□□□□□ -0.95
NR1I3-228ENST00000511676 USP45Q70EL2 814 aa9.12□□□□□ -0.95
NR1I3-228ENST00000511676 RASSF3Q86WH2 238 aa9.12□□□□□ -0.95
NR1I3-228ENST00000511676 CTAGE3PQ8IX95 158 aa9.12□□□□□ -0.95
NR1I3-228ENST00000511676 PHTF2Q8N3S3 785 aa9.12□□□□□ -0.95
NR1I3-228ENST00000511676 PPM1NQ8N819 430 aa9.12□□□□□ -0.95
NR1I3-228ENST00000511676 DTX3LQ8TDB6 740 aa9.12□□□□□ -0.95
NR1I3-228ENST00000511676 MFSD3Q96ES6 412 aa9.12□□□□□ -0.95
NR1I3-228ENST00000511676 CABS1Q96KC9 395 aa9.12□□□□□ -0.95
NR1I3-228ENST00000511676 FCRL3Q96P31 734 aaPredicted RBP9.12□□□□□ -0.95
NR1I3-228ENST00000511676 RBBP8Q99708 897 aa9.12□□□□□ -0.95
NR1I3-228ENST00000511676 CDH19Q9H159 772 aa9.12□□□□□ -0.95
NR1I3-228ENST00000511676 ARRDC1-AS1Q9H2J1 176 aa9.12□□□□□ -0.95
NR1I3-228ENST00000511676 RHOJQ9H4E5 214 aa9.12□□□□□ -0.95
NR1I3-228ENST00000511676 CCDC134Q9H6E4 229 aa9.12□□□□□ -0.95
NR1I3-228ENST00000511676 FBRSQ9HAH7 460 aa9.12□□□□□ -0.95
NR1I3-228ENST00000511676 C20orf96Q9NUD7 363 aaPredicted RBP9.12□□□□□ -0.95
NR1I3-228ENST00000511676 GTSE1Q9NYZ3 720 aa9.12□□□□□ -0.95
NR1I3-228ENST00000511676 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.12□□□□□ -0.95
NR1I3-228ENST00000511676 BCCIPQ9P287 314 aaKnown RBP eCLIP9.12□□□□□ -0.95
NR1I3-228ENST00000511676 PHTF1Q9UMS5 762 aa9.12□□□□□ -0.95
NR1I3-228ENST00000511676 PLA2G4CQ9UP65 541 aa9.12□□□□□ -0.95
NR1I3-228ENST00000511676 STARD13Q9Y3M8 1113 aa9.12□□□□□ -0.95
NR1I3-228ENST00000511676 DMDP11532 3685 aa9.11□□□□□ -0.95
NR1I3-228ENST00000511676 COL4A3Q01955 1670 aa9.11□□□□□ -0.95
NR1I3-228ENST00000511676 KIAA1549LQ6ZVL6 1849 aa9.11□□□□□ -0.95
NR1I3-228ENST00000511676 A0A0J9YYE9 177 aa9.11□□□□□ -0.95
NR1I3-228ENST00000511676 EDDM13A0A1B0GTR0 161 aa9.11□□□□□ -0.95
NR1I3-228ENST00000511676 FAM47DPA6NHR8 397 aa9.11□□□□□ -0.95
NR1I3-228ENST00000511676 SMIM23A6NLE4 172 aa9.11□□□□□ -0.95
NR1I3-228ENST00000511676 K7ERQ8 282 aa9.11□□□□□ -0.95
NR1I3-228ENST00000511676 K7ESF4 209 aa9.11□□□□□ -0.95
NR1I3-228ENST00000511676 ZWINTO95229 277 aa9.11□□□□□ -0.95
NR1I3-228ENST00000511676 TRBC1P01850 177 aa9.11□□□□□ -0.95
NR1I3-228ENST00000511676 MT-ND3P03897 115 aa9.11□□□□□ -0.95
NR1I3-228ENST00000511676 PRNPP04156 253 aa9.11□□□□□ -0.95
NR1I3-228ENST00000511676 HNRNPLP14866 589 aaKnown RBP eCLIP9.11□□□□□ -0.95
NR1I3-228ENST00000511676 BRAFP15056 766 aa9.11□□□□□ -0.95
NR1I3-228ENST00000511676 ARSAP15289 507 aa9.11□□□□□ -0.95
NR1I3-228ENST00000511676 ZNF30P17039 623 aa9.11□□□□□ -0.95
NR1I3-228ENST00000511676 TPH1P17752 444 aa9.11□□□□□ -0.95
NR1I3-228ENST00000511676 LPOP22079 712 aaPredicted RBP9.11□□□□□ -0.95
NR1I3-228ENST00000511676 ARNTP27540 789 aa9.11□□□□□ -0.95
NR1I3-228ENST00000511676 NMBRP28336 390 aa9.11□□□□□ -0.95
NR1I3-228ENST00000511676 HMGCLP35914 325 aa9.11□□□□□ -0.95
NR1I3-228ENST00000511676 MPLP40238 635 aa9.11□□□□□ -0.95
NR1I3-228ENST00000511676 GRIA2P42262 883 aa9.11□□□□□ -0.95
NR1I3-228ENST00000511676 MAGEA12P43365 314 aa9.11□□□□□ -0.95
NR1I3-228ENST00000511676 TNFRSF4P43489 277 aa9.11□□□□□ -0.95
NR1I3-228ENST00000511676 SERPINB8P50452 374 aa9.11□□□□□ -0.95
NR1I3-228ENST00000511676 CCNHP51946 323 aaPredicted RBP9.11□□□□□ -0.95
NR1I3-228ENST00000511676 EPHB1P54762 984 aa9.11□□□□□ -0.95
NR1I3-228ENST00000511676 PRAMEP78395 509 aa9.11□□□□□ -0.95
NR1I3-228ENST00000511676 SLC18A2Q05940 514 aa9.11□□□□□ -0.95
NR1I3-228ENST00000511676 MTM1Q13496 603 aa9.11□□□□□ -0.95
NR1I3-228ENST00000511676 OLIG2Q13516 323 aa9.11□□□□□ -0.95
NR1I3-228ENST00000511676 ENPP2Q13822 863 aa9.11□□□□□ -0.95
NR1I3-228ENST00000511676 SEPT6Q14141 434 aa9.11□□□□□ -0.95
NR1I3-228ENST00000511676 ELAVL3Q14576 367 aaKnown RBP9.11□□□□□ -0.95
NR1I3-228ENST00000511676 CNGA3Q16281 694 aa9.11□□□□□ -0.95
NR1I3-228ENST00000511676 QPCTQ16769 361 aa9.11□□□□□ -0.95
NR1I3-228ENST00000511676 GEN1Q17RS7 908 aa9.11□□□□□ -0.95
NR1I3-228ENST00000511676 INSCQ1MX18 579 aa9.11□□□□□ -0.95
NR1I3-228ENST00000511676 RNF187Q5TA31 235 aaPredicted RBP9.11□□□□□ -0.95
NR1I3-228ENST00000511676 STPG1Q5TH74 334 aa9.11□□□□□ -0.95
NR1I3-228ENST00000511676 TMEM215Q68D42 235 aa9.11□□□□□ -0.95
NR1I3-228ENST00000511676 SDE2Q6IQ49 451 aa9.11□□□□□ -0.95
NR1I3-228ENST00000511676 MRNIPQ6NTE8 343 aa9.11□□□□□ -0.95
NR1I3-228ENST00000511676 ESRP1Q6NXG1 681 aaKnown RBP9.11□□□□□ -0.95
NR1I3-228ENST00000511676 AFTPHQ6ULP2 937 aa9.11□□□□□ -0.95
NR1I3-228ENST00000511676 SLC36A4Q6YBV0 504 aa9.11□□□□□ -0.95
NR1I3-228ENST00000511676 GLT6D1Q7Z4J2 308 aa9.11□□□□□ -0.95
NR1I3-228ENST00000511676 DSG4Q86SJ6 1040 aa9.11□□□□□ -0.95
NR1I3-228ENST00000511676 SRRM1Q8IYB3 904 aaKnown RBP9.11□□□□□ -0.95
NR1I3-228ENST00000511676 CBARPQ8N350 705 aaPredicted RBP9.11□□□□□ -0.95
NR1I3-228ENST00000511676 SLC25A41Q8N5S1 370 aa9.11□□□□□ -0.95
NR1I3-228ENST00000511676 C2CD4AQ8NCU7 369 aaPredicted RBP9.11□□□□□ -0.95
NR1I3-228ENST00000511676 LPCAT1Q8NF37 534 aa9.11□□□□□ -0.95
NR1I3-228ENST00000511676 OR13J1Q8NGT2 312 aa9.11□□□□□ -0.95
NR1I3-228ENST00000511676 OR2A12Q8NGT7 310 aa9.11□□□□□ -0.95
NR1I3-228ENST00000511676 PIH1D2Q8WWB5 315 aa9.11□□□□□ -0.95
NR1I3-228ENST00000511676 SCRN2Q96FV2 425 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms