RNA–Protein interactions for RNA: ENST00000511467.1

PTPN13-209, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 2 BASIC

Gene PTPN13, Length 8,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-209ENST00000511467 LDLRP01130 860 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 SOX9P48436 509 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 CLK2P49760 499 aaKnown RBP4.95□□□□□ -1.62
PTPN13-209ENST00000511467 CACNG1Q06432 222 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.95□□□□□ -1.62
PTPN13-209ENST00000511467 EIF5AL1Q6IS14 154 aaKnown RBP4.95□□□□□ -1.62
PTPN13-209ENST00000511467 ABHD15Q6UXT9 468 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 TRMT1LQ7Z2T5 733 aaKnown RBP4.95□□□□□ -1.62
PTPN13-209ENST00000511467 HIPK1Q86Z02 1210 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 MRPL41Q8IXM3 137 aaKnown RBP4.95□□□□□ -1.62
PTPN13-209ENST00000511467 FTMTQ8N4E7 242 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 CCNYL1Q8N7R7 359 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 RASGRP4Q8TDF6 673 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 ATG4CQ96DT6 458 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 SPATA17Q96L03 361 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 BTBD9Q96Q07 612 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 RBM4BQ9BQ04 359 aaKnown RBP4.95□□□□□ -1.62
PTPN13-209ENST00000511467 RBM4Q9BWF3 364 aaKnown RBP4.95□□□□□ -1.62
PTPN13-209ENST00000511467 SLC29A3Q9BZD2 475 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 POLR2J2Q9GZM3 115 aaKnown RBP4.95□□□□□ -1.62
PTPN13-209ENST00000511467 TMEM39BQ9GZU3 492 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 POLR2J3Q9H1A7 115 aaKnown RBP4.95□□□□□ -1.62
PTPN13-209ENST00000511467 CLEC4MQ9H2X3 399 aaPredicted RBP4.95□□□□□ -1.62
PTPN13-209ENST00000511467 REEP1Q9H902 201 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 SENP2Q9HC62 589 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 MIOSQ9NXC5 875 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 PCDHGA11Q9Y5H2 935 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 MAGED1Q9Y5V3 778 aaPredicted RBP4.95□□□□□ -1.62
PTPN13-209ENST00000511467 ILVBLA1L0T0 632 aa4.94□□□□□ -1.62
PTPN13-209ENST00000511467 OR2AG2A6NM03 316 aa4.94□□□□□ -1.62
PTPN13-209ENST00000511467 DNM1LO00429 736 aa4.94□□□□□ -1.62
PTPN13-209ENST00000511467 CBFA2T3O75081 653 aa4.94□□□□□ -1.62
PTPN13-209ENST00000511467 UGT2B11O75310 529 aa4.94□□□□□ -1.62
PTPN13-209ENST00000511467 GSTM3P21266 225 aa4.94□□□□□ -1.62
PTPN13-209ENST00000511467 PSMA1P25786 263 aaKnown RBP4.94□□□□□ -1.62
PTPN13-209ENST00000511467 ADORA2BP29275 332 aa4.94□□□□□ -1.62
PTPN13-209ENST00000511467 NRG1Q02297 640 aaPredicted RBP4.94□□□□□ -1.62
PTPN13-209ENST00000511467 SEMA3AQ14563 771 aa4.94□□□□□ -1.62
PTPN13-209ENST00000511467 PRKD1Q15139 912 aaPredicted RBP4.94□□□□□ -1.62
PTPN13-209ENST00000511467 TNFAIP8L3Q5GJ75 292 aa4.94□□□□□ -1.62
PTPN13-209ENST00000511467 TOR1AIP1Q5JTV8 583 aa4.94□□□□□ -1.62
PTPN13-209ENST00000511467 EOGTQ5NDL2 527 aa4.94□□□□□ -1.62
PTPN13-209ENST00000511467 CERCAMQ5T4B2 595 aa4.94□□□□□ -1.62
PTPN13-209ENST00000511467 TSTD2Q5T7W7 516 aa4.94□□□□□ -1.62
PTPN13-209ENST00000511467 CDCA2Q69YH5 1023 aaPredicted RBP4.94□□□□□ -1.62
PTPN13-209ENST00000511467 CYP20A1Q6UW02 462 aa4.94□□□□□ -1.62
PTPN13-209ENST00000511467 GPR142Q7Z601 462 aa4.94□□□□□ -1.62
PTPN13-209ENST00000511467 SCML4Q8N228 414 aa4.94□□□□□ -1.62
PTPN13-209ENST00000511467 PCDH20Q8N6Y1 951 aaKnown RBP4.94□□□□□ -1.62
PTPN13-209ENST00000511467 HM13Q8TCT9 377 aa4.94□□□□□ -1.62
PTPN13-209ENST00000511467 CXorf40AQ8TE69 158 aa4.94□□□□□ -1.62
PTPN13-209ENST00000511467 BTN2A2Q8WVV5 523 aa4.94□□□□□ -1.62
PTPN13-209ENST00000511467 OIT3Q8WWZ8 545 aa4.94□□□□□ -1.62
PTPN13-209ENST00000511467 NELL1Q92832 810 aa4.94□□□□□ -1.62
PTPN13-209ENST00000511467 DNAJC1Q96KC8 554 aaKnown RBP4.94□□□□□ -1.62
PTPN13-209ENST00000511467 TMEM74Q96NL1 305 aa4.94□□□□□ -1.62
PTPN13-209ENST00000511467 GINS4Q9BRT9 223 aa4.94□□□□□ -1.62
PTPN13-209ENST00000511467 TMBIM4Q9HC24 238 aa4.94□□□□□ -1.62
PTPN13-209ENST00000511467 FBXO28Q9NVF7 368 aa4.94□□□□□ -1.62
PTPN13-209ENST00000511467 ARL8BQ9NVJ2 186 aa4.94□□□□□ -1.62
PTPN13-209ENST00000511467 ZNF282Q9UDV7 671 aaPredicted RBP4.94□□□□□ -1.62
PTPN13-209ENST00000511467 CIDEBQ9UHD4 219 aa4.94□□□□□ -1.62
PTPN13-209ENST00000511467 STOML2Q9UJZ1 356 aa4.94□□□□□ -1.62
PTPN13-209ENST00000511467 PTBP2Q9UKA9 531 aaKnown RBP4.94□□□□□ -1.62
PTPN13-209ENST00000511467 PADI4Q9UM07 663 aa4.94□□□□□ -1.62
PTPN13-209ENST00000511467 RECQL4O94761 1208 aa4.94□□□□□ -1.62
PTPN13-209ENST00000511467 CCNB1P14635 433 aa4.94□□□□□ -1.62
PTPN13-209ENST00000511467 PROZP22891 400 aa4.94□□□□□ -1.62
PTPN13-209ENST00000511467 PTGS2P35354 604 aa4.94□□□□□ -1.62
PTPN13-209ENST00000511467 CORO7P57737 925 aa4.94□□□□□ -1.62
PTPN13-209ENST00000511467 RAB10P61026 200 aa4.94□□□□□ -1.62
PTPN13-209ENST00000511467 USP39Q53GS9 565 aaKnown RBP4.94□□□□□ -1.62
PTPN13-209ENST00000511467 C9orf57Q5W0N0 161 aa4.94□□□□□ -1.62
PTPN13-209ENST00000511467 CERS2Q96G23 380 aa4.94□□□□□ -1.62
PTPN13-209ENST00000511467 ZNF578Q96N58 590 aaPredicted RBP4.94□□□□□ -1.62
PTPN13-209ENST00000511467 FAM83CQ9BQN1 747 aa4.94□□□□□ -1.62
PTPN13-209ENST00000511467 ACTR8Q9H981 624 aa4.94□□□□□ -1.62
PTPN13-209ENST00000511467 A1CFQ9NQ94 594 aaKnown RBP4.94□□□□□ -1.62
PTPN13-209ENST00000511467 CLN6Q9NWW5 311 aa4.94□□□□□ -1.62
PTPN13-209ENST00000511467 COPS7AQ9UBW8 275 aa4.94□□□□□ -1.62
PTPN13-209ENST00000511467 MTF2Q9Y483 593 aaPredicted RBP4.94□□□□□ -1.62
PTPN13-209ENST00000511467 ZNF432O94892 652 aa4.94□□□□□ -1.62
PTPN13-209ENST00000511467 KDELR1P24390 212 aa4.94□□□□□ -1.62
PTPN13-209ENST00000511467 RPL21P46778 160 aaKnown RBP4.94□□□□□ -1.62
PTPN13-209ENST00000511467 NRIP1P48552 1158 aa4.94□□□□□ -1.62
PTPN13-209ENST00000511467 LARS2Q15031 903 aaKnown RBP4.94□□□□□ -1.62
PTPN13-209ENST00000511467 FIP1L1Q6UN15 594 aaKnown RBP4.94□□□□□ -1.62
PTPN13-209ENST00000511467 PHACTR4Q8IZ21 702 aa4.94□□□□□ -1.62
PTPN13-209ENST00000511467 IPCEF1Q8WWN9 437 aaPredicted RBP4.94□□□□□ -1.62
PTPN13-209ENST00000511467 KIAA1191Q96A73 305 aa4.94□□□□□ -1.62
PTPN13-209ENST00000511467 SENP8Q96LD8 212 aa4.94□□□□□ -1.62
PTPN13-209ENST00000511467 SLC2A13Q96QE2 648 aa4.94□□□□□ -1.62
PTPN13-209ENST00000511467 OMDQ99983 421 aa4.94□□□□□ -1.62
PTPN13-209ENST00000511467 TRIM51Q9BSJ1 452 aa4.94□□□□□ -1.62
PTPN13-209ENST00000511467 RTKNQ9BST9 563 aa4.94□□□□□ -1.62
PTPN13-209ENST00000511467 C8orf33Q9H7E9 229 aaPredicted RBP4.94□□□□□ -1.62
PTPN13-209ENST00000511467 ZFP57Q9NU63 452 aa4.94□□□□□ -1.62
PTPN13-209ENST00000511467 DNMT3AQ9Y6K1 912 aaPredicted RBP4.94□□□□□ -1.62
PTPN13-209ENST00000511467 GJE1A6NN92 205 aa4.94□□□□□ -1.62
PTPN13-209ENST00000511467 UGDHO60701 494 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms