RNA–Protein interactions for RNA: ENST00000511316.1

HMGB2-205, Transcript of high mobility group box 2, humanhuman

TSL 2

Gene HMGB2, Length 1,841 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-205ENST00000511316 SHKBP1Q8TBC3 707 aa12.89□□□□□ -0.35
HMGB2-205ENST00000511316 KCTD13Q8WZ19 329 aa12.89□□□□□ -0.35
HMGB2-205ENST00000511316 FGF14Q92915 247 aa12.89□□□□□ -0.35
HMGB2-205ENST00000511316 MYLPFQ96A32 169 aa12.89□□□□□ -0.35
HMGB2-205ENST00000511316 EME1Q96AY2 570 aa12.89□□□□□ -0.35
HMGB2-205ENST00000511316 NMD3Q96D46 503 aaKnown RBP12.89□□□□□ -0.35
HMGB2-205ENST00000511316 HDAC11Q96DB2 347 aa12.89□□□□□ -0.35
HMGB2-205ENST00000511316 ZNF597Q96LX8 424 aa12.89□□□□□ -0.35
HMGB2-205ENST00000511316 ZNF512Q96ME7 567 aaPredicted RBP12.89□□□□□ -0.35
HMGB2-205ENST00000511316 AGAP3Q96P47 875 aa12.89□□□□□ -0.35
HMGB2-205ENST00000511316 TRMOQ9BU70 441 aa12.89□□□□□ -0.35
HMGB2-205ENST00000511316 TASP1Q9H6P5 420 aa12.89□□□□□ -0.35
HMGB2-205ENST00000511316 TRPC7Q9HCX4 862 aa12.89□□□□□ -0.35
HMGB2-205ENST00000511316 IPO11Q9UI26 975 aaKnown RBP12.89□□□□□ -0.35
HMGB2-205ENST00000511316 CLDN5O00501 218 aa12.88□□□□□ -0.35
HMGB2-205ENST00000511316 TRMUO75648 421 aaKnown RBP12.88□□□□□ -0.35
HMGB2-205ENST00000511316 F9P00740 461 aa12.88□□□□□ -0.35
HMGB2-205ENST00000511316 CEBPBP17676 345 aa12.88□□□□□ -0.35
HMGB2-205ENST00000511316 PAMP19021 973 aa12.88□□□□□ -0.35
HMGB2-205ENST00000511316 BDNFP23560 247 aa12.88□□□□□ -0.35
HMGB2-205ENST00000511316 MAGEA11P43364 429 aa12.88□□□□□ -0.35
HMGB2-205ENST00000511316 GRIA4P48058 902 aa12.88□□□□□ -0.35
HMGB2-205ENST00000511316 CDK9P50750 372 aaKnown RBP12.88□□□□□ -0.35
HMGB2-205ENST00000511316 MRPS22P82650 360 aaKnown RBP12.88□□□□□ -0.35
HMGB2-205ENST00000511316 RHDQ02161 417 aa12.88□□□□□ -0.35
HMGB2-205ENST00000511316 PPM1JQ5JR12 505 aa12.88□□□□□ -0.35
HMGB2-205ENST00000511316 SAMD4BQ5PRF9 694 aaKnown RBP12.88□□□□□ -0.35
HMGB2-205ENST00000511316 VWA5B1Q5TIE3 1220 aa12.88□□□□□ -0.35
HMGB2-205ENST00000511316 PARM1Q6UWI2 310 aa12.88□□□□□ -0.35
HMGB2-205ENST00000511316 CNTN4Q8IWV2 1026 aa12.88□□□□□ -0.35
HMGB2-205ENST00000511316 KLHDC8BQ8IXV7 354 aa12.88□□□□□ -0.35
HMGB2-205ENST00000511316 GIPC2Q8TF65 315 aa12.88□□□□□ -0.35
HMGB2-205ENST00000511316 LGMNQ99538 433 aa12.88□□□□□ -0.35
HMGB2-205ENST00000511316 SEPT5Q99719 369 aaPredicted RBP12.88□□□□□ -0.35
HMGB2-205ENST00000511316 RSL24D1Q9UHA3 163 aaKnown RBP12.88□□□□□ -0.35
HMGB2-205ENST00000511316 MYRFQ9Y2G1 1151 aa12.88□□□□□ -0.35
HMGB2-205ENST00000511316 ACOT9Q9Y305 439 aa12.88□□□□□ -0.35
HMGB2-205ENST00000511316 AAR2Q9Y312 384 aaKnown RBP12.88□□□□□ -0.35
HMGB2-205ENST00000511316 AP4S1Q9Y587 144 aa12.88□□□□□ -0.35
HMGB2-205ENST00000511316 PTPRDP23468 1912 aa12.88□□□□□ -0.35
HMGB2-205ENST00000511316 MYO15AQ9UKN7 3530 aa12.88□□□□□ -0.35
HMGB2-205ENST00000511316 BBIP1A8MTZ0 92 aa12.88□□□□□ -0.35
HMGB2-205ENST00000511316 ACOT8O14734 319 aa12.88□□□□□ -0.35
HMGB2-205ENST00000511316 DCLK1O15075 740 aa12.88□□□□□ -0.35
HMGB2-205ENST00000511316 BEST1O76090 585 aa12.88□□□□□ -0.35
HMGB2-205ENST00000511316 PGM3O95394 542 aa12.88□□□□□ -0.35
HMGB2-205ENST00000511316 PIGNO95427 931 aa12.88□□□□□ -0.35
HMGB2-205ENST00000511316 H6PDO95479 791 aa12.88□□□□□ -0.35
HMGB2-205ENST00000511316 TOP3BO95985 862 aaKnown RBP12.88□□□□□ -0.35
HMGB2-205ENST00000511316 F11P03951 625 aa12.88□□□□□ -0.35
HMGB2-205ENST00000511316 SLC7A1P30825 629 aa12.88□□□□□ -0.35
HMGB2-205ENST00000511316 ARRB2P32121 409 aa12.88□□□□□ -0.35
HMGB2-205ENST00000511316 HTR7P34969 479 aa12.88□□□□□ -0.35
HMGB2-205ENST00000511316 EPHB3P54753 998 aa12.88□□□□□ -0.35
HMGB2-205ENST00000511316 ZBTB17Q13105 803 aa12.88□□□□□ -0.35
HMGB2-205ENST00000511316 KCTD21Q4G0X4 260 aa12.88□□□□□ -0.35
HMGB2-205ENST00000511316 KCTD11Q693B1 232 aa12.88□□□□□ -0.35
HMGB2-205ENST00000511316 GET4Q7L5D6 327 aaPredicted RBP12.88□□□□□ -0.35
HMGB2-205ENST00000511316 SLC44A3Q8N4M1 653 aa12.88□□□□□ -0.35
HMGB2-205ENST00000511316 CCDC185Q8N715 623 aa12.88□□□□□ -0.35
HMGB2-205ENST00000511316 TRIML2Q8N7C3 387 aa12.88□□□□□ -0.35
HMGB2-205ENST00000511316 ZMIZ2Q8NF64 920 aa12.88□□□□□ -0.35
HMGB2-205ENST00000511316 TSPAN14Q8NG11 270 aa12.88□□□□□ -0.35
HMGB2-205ENST00000511316 ING5Q8WYH8 240 aa12.88□□□□□ -0.35
HMGB2-205ENST00000511316 RCN3Q96D15 328 aa12.88□□□□□ -0.35
HMGB2-205ENST00000511316 MYRFLQ96LU7 910 aa12.88□□□□□ -0.35
HMGB2-205ENST00000511316 CNBD2Q96M20 576 aa12.88□□□□□ -0.35
HMGB2-205ENST00000511316 OR52B2Q96RD2 323 aa12.88□□□□□ -0.35
HMGB2-205ENST00000511316 MRPL57Q9BQC6 102 aaKnown RBP12.88□□□□□ -0.35
HMGB2-205ENST00000511316 SLC25A23Q9BV35 468 aa12.88□□□□□ -0.35
HMGB2-205ENST00000511316 TRIM62Q9BVG3 475 aa12.88□□□□□ -0.35
HMGB2-205ENST00000511316 KIFC1Q9BW19 673 aa12.88□□□□□ -0.35
HMGB2-205ENST00000511316 MRPL46Q9H2W6 279 aaKnown RBP12.88□□□□□ -0.35
HMGB2-205ENST00000511316 C20orf96Q9NUD7 363 aaPredicted RBP12.88□□□□□ -0.35
HMGB2-205ENST00000511316 SLC8A2Q9UPR5 921 aa12.88□□□□□ -0.35
HMGB2-205ENST00000511316 USP34Q70CQ2 3546 aa12.87□□□□□ -0.35
HMGB2-205ENST00000511316 HEATR9A2RTY3 570 aa12.87□□□□□ -0.35
HMGB2-205ENST00000511316 PFDN1O60925 122 aa12.87□□□□□ -0.35
HMGB2-205ENST00000511316 BMP10O95393 424 aa12.87□□□□□ -0.35
HMGB2-205ENST00000511316 IMPDH2P12268 514 aa12.87□□□□□ -0.35
HMGB2-205ENST00000511316 FCARP24071 287 aa12.87□□□□□ -0.35
HMGB2-205ENST00000511316 PTPN3P26045 913 aa12.87□□□□□ -0.35
HMGB2-205ENST00000511316 RANBP1P43487 201 aa12.87□□□□□ -0.35
HMGB2-205ENST00000511316 USP46P62068 366 aa12.87□□□□□ -0.35
HMGB2-205ENST00000511316 NSUN2Q08J23 767 aaKnown RBP eCLIP12.87□□□□□ -0.35
HMGB2-205ENST00000511316 HTR4Q13639 388 aa12.87□□□□□ -0.35
HMGB2-205ENST00000511316 RAB6CQ53S08 254 aa12.87□□□□□ -0.35
HMGB2-205ENST00000511316 ARL13AQ5H913 290 aaPredicted RBP12.87□□□□□ -0.35
HMGB2-205ENST00000511316 BSPRYQ5W0U4 402 aa12.87□□□□□ -0.35
HMGB2-205ENST00000511316 KRT80Q6KB66 452 aa12.87□□□□□ -0.35
HMGB2-205ENST00000511316 DHRS4L2Q6PKH6 230 aa12.87□□□□□ -0.35
HMGB2-205ENST00000511316 KIAA0408Q6ZU52 694 aa12.87□□□□□ -0.35
HMGB2-205ENST00000511316 CMC1Q7Z7K0 106 aa12.87□□□□□ -0.35
HMGB2-205ENST00000511316 RBM12BQ8IXT5 1001 aaKnown RBP12.87□□□□□ -0.35
HMGB2-205ENST00000511316 TMEM102Q8N9M5 508 aaPredicted RBP12.87□□□□□ -0.35
HMGB2-205ENST00000511316 ROPN1LQ96C74 230 aa12.87□□□□□ -0.35
HMGB2-205ENST00000511316 PGAP3Q96FM1 320 aaPredicted RBP12.87□□□□□ -0.35
HMGB2-205ENST00000511316 ASIC4Q96FT7 647 aa12.87□□□□□ -0.35
HMGB2-205ENST00000511316 LRRC3BQ96PB8 259 aa12.87□□□□□ -0.35
HMGB2-205ENST00000511316 SLC2A13Q96QE2 648 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms