RNA–Protein interactions for RNA: ENST00000510245.1

CAST-231, Transcript of calpastatin, human

TSL 4

Gene CAST, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAST-231	ENST00000510245	VWA7	Q9Y334	891 aa		7.72	□□□□□ -1.17
CAST-231	ENST00000510245	SNX14	Q9Y5W7	946 aa		7.72	□□□□□ -1.17
CAST-231	ENST00000510245		U3KQA8	63 aa		7.72	□□□□□ -1.17
CAST-231	ENST00000510245	HIVEP3	Q5T1R4	2406 aa		7.72	□□□□□ -1.17
CAST-231	ENST00000510245	CCDC196	A0A1B0GTZ2	297 aa		7.71	□□□□□ -1.18
CAST-231	ENST00000510245	ARHGEF35	A5YM69	484 aa		7.71	□□□□□ -1.18
CAST-231	ENST00000510245	NEMP2	A6NFY4	417 aa		7.71	□□□□□ -1.18
CAST-231	ENST00000510245	LACTBL1	A8MY62	500 aa		7.71	□□□□□ -1.18
CAST-231	ENST00000510245		K7ESM1	405 aa		7.71	□□□□□ -1.18
CAST-231	ENST00000510245	DAPK3	O43293	454 aa		7.71	□□□□□ -1.18
CAST-231	ENST00000510245	COCH	O43405	550 aa		7.71	□□□□□ -1.18
CAST-231	ENST00000510245	UBXN7	O94888	489 aa		7.71	□□□□□ -1.18
CAST-231	ENST00000510245	PLAT	P00750	562 aa		7.71	□□□□□ -1.18
CAST-231	ENST00000510245	PRKAR1A	P10644	381 aa		7.71	□□□□□ -1.18
CAST-231	ENST00000510245	XRCC6	P12956	609 aa	Known RBP eCLIP	7.71	□□□□□ -1.18
CAST-231	ENST00000510245	GCFC2	P16383	781 aa	Known RBP	7.71	□□□□□ -1.18
CAST-231	ENST00000510245	CYP11B2	P19099	503 aa		7.71	□□□□□ -1.18
CAST-231	ENST00000510245	ACAT1	P24752	427 aa	Known RBP	7.71	□□□□□ -1.18
CAST-231	ENST00000510245	ECHS1	P30084	290 aa		7.71	□□□□□ -1.18
CAST-231	ENST00000510245	MAGEA11	P43364	429 aa		7.71	□□□□□ -1.18
CAST-231	ENST00000510245	LEPR	P48357	1165 aa	Known RBP	7.71	□□□□□ -1.18
CAST-231	ENST00000510245	TAF6	P49848	677 aa		7.71	□□□□□ -1.18
CAST-231	ENST00000510245	CCR5	P51681	352 aa		7.71	□□□□□ -1.18
CAST-231	ENST00000510245	MEF2A	Q02078	507 aa	Predicted RBP	7.71	□□□□□ -1.18
CAST-231	ENST00000510245	OVGP1	Q12889	678 aa		7.71	□□□□□ -1.18
CAST-231	ENST00000510245	FGL2	Q14314	439 aa		7.71	□□□□□ -1.18
CAST-231	ENST00000510245	KCNJ12	Q14500	433 aa		7.71	□□□□□ -1.18
CAST-231	ENST00000510245	DHX8	Q14562	1220 aa	Known RBP	7.71	□□□□□ -1.18
CAST-231	ENST00000510245	USP10	Q14694	798 aa	Known RBP	7.71	□□□□□ -1.18
CAST-231	ENST00000510245	SURF1	Q15526	300 aa		7.71	□□□□□ -1.18
CAST-231	ENST00000510245	GEN1	Q17RS7	908 aa		7.71	□□□□□ -1.18
CAST-231	ENST00000510245	SPATA1	Q5VX52	437 aa		7.71	□□□□□ -1.18
CAST-231	ENST00000510245	ZNF776	Q68DI1	518 aa	Predicted RBP	7.71	□□□□□ -1.18
CAST-231	ENST00000510245	PPP4R4	Q6NUP7	873 aa		7.71	□□□□□ -1.18
CAST-231	ENST00000510245	ARHGEF18	Q6ZSZ5	1173 aa		7.71	□□□□□ -1.18
CAST-231	ENST00000510245	ASB18	Q6ZVZ8	466 aa		7.71	□□□□□ -1.18
CAST-231	ENST00000510245	USP30	Q70CQ3	517 aa		7.71	□□□□□ -1.18
CAST-231	ENST00000510245	ANKS1B	Q7Z6G8	1248 aa		7.71	□□□□□ -1.18
CAST-231	ENST00000510245	IQCH	Q86VS3	1027 aa		7.71	□□□□□ -1.18
CAST-231	ENST00000510245	REXO1L1P	Q8IX06	675 aa		7.71	□□□□□ -1.18
CAST-231	ENST00000510245	PLA2G15	Q8NCC3	412 aa		7.71	□□□□□ -1.18
CAST-231	ENST00000510245	OR2T34	Q8NGX1	318 aa		7.71	□□□□□ -1.18
CAST-231	ENST00000510245	SPATA3	Q8NHX4	192 aa		7.71	□□□□□ -1.18
CAST-231	ENST00000510245	SORCS1	Q8WY21	1168 aa		7.71	□□□□□ -1.18
CAST-231	ENST00000510245	GOLGA1	Q92805	767 aa		7.71	□□□□□ -1.18
CAST-231	ENST00000510245	KIFAP3	Q92845	792 aa		7.71	□□□□□ -1.18
CAST-231	ENST00000510245	GFM2	Q969S9	779 aa	Known RBP	7.71	□□□□□ -1.18
CAST-231	ENST00000510245	C1GALT1C1	Q96EU7	318 aa		7.71	□□□□□ -1.18
CAST-231	ENST00000510245	ZBTB45	Q96K62	511 aa	Predicted RBP	7.71	□□□□□ -1.18
CAST-231	ENST00000510245	CGRRF1	Q99675	332 aa		7.71	□□□□□ -1.18
CAST-231	ENST00000510245	PREB	Q9HCU5	417 aa		7.71	□□□□□ -1.18
CAST-231	ENST00000510245	ELOVL2	Q9NXB9	296 aa		7.71	□□□□□ -1.18
CAST-231	ENST00000510245	FBXL12	Q9NXK8	326 aa		7.71	□□□□□ -1.18
CAST-231	ENST00000510245	DDX43	Q9NXZ2	648 aa	Known RBP	7.71	□□□□□ -1.18
CAST-231	ENST00000510245	FOXJ2	Q9P0K8	574 aa		7.71	□□□□□ -1.18
CAST-231	ENST00000510245	ADAM29	Q9UKF5	820 aa		7.71	□□□□□ -1.18
CAST-231	ENST00000510245	GTF3C4	Q9UKN8	822 aa		7.71	□□□□□ -1.18
CAST-231	ENST00000510245	SLC27A6	Q9Y2P4	619 aa		7.71	□□□□□ -1.18
CAST-231	ENST00000510245	TRIP11	Q15643	1979 aa		7.7	□□□□□ -1.18
CAST-231	ENST00000510245	FAM171A2	A8MVW0	826 aa		7.7	□□□□□ -1.18
CAST-231	ENST00000510245	TCP11X1	B4DZS4	312 aa		7.7	□□□□□ -1.18
CAST-231	ENST00000510245	TMX2-CTNND1	H3BSU7	103 aa		7.7	□□□□□ -1.18
CAST-231	ENST00000510245	PIR	O00625	290 aa		7.7	□□□□□ -1.18
CAST-231	ENST00000510245	CCNT1	O60563	726 aa	Known RBP	7.7	□□□□□ -1.18
CAST-231	ENST00000510245	TOM1L1	O75674	476 aa		7.7	□□□□□ -1.18
CAST-231	ENST00000510245	TOX4	O94842	621 aa		7.7	□□□□□ -1.18
CAST-231	ENST00000510245	CD82	P27701	267 aa		7.7	□□□□□ -1.18
CAST-231	ENST00000510245	BUD31	P41223	144 aa	Predicted RBP	7.7	□□□□□ -1.18
CAST-231	ENST00000510245	MFAP3	P55082	362 aa		7.7	□□□□□ -1.18
CAST-231	ENST00000510245	TAF10	Q12962	218 aa		7.7	□□□□□ -1.18
CAST-231	ENST00000510245	CCDC142	Q17RM4	750 aa		7.7	□□□□□ -1.18
CAST-231	ENST00000510245	HECTD3	Q5T447	861 aa		7.7	□□□□□ -1.18
CAST-231	ENST00000510245	SP5	Q6BEB4	398 aa	Predicted RBP	7.7	□□□□□ -1.18
CAST-231	ENST00000510245	C4orf50	Q6ZRC1	276 aa		7.7	□□□□□ -1.18
CAST-231	ENST00000510245	TMPRSS9	Q7Z410	1059 aa		7.7	□□□□□ -1.18
CAST-231	ENST00000510245	ZNF366	Q8N895	744 aa		7.7	□□□□□ -1.18
CAST-231	ENST00000510245	CCHCR1	Q8TD31	782 aa		7.7	□□□□□ -1.18
CAST-231	ENST00000510245	ZNF480	Q8WV37	535 aa		7.7	□□□□□ -1.18
CAST-231	ENST00000510245	GCDH	Q92947	438 aa	Predicted RBP	7.7	□□□□□ -1.18
CAST-231	ENST00000510245	P2RY11	Q96G91	374 aa		7.7	□□□□□ -1.18
CAST-231	ENST00000510245	CEP295NL	Q96MC4	621 aa		7.7	□□□□□ -1.18
CAST-231	ENST00000510245	TSPAN18	Q96SJ8	248 aa		7.7	□□□□□ -1.18
CAST-231	ENST00000510245	ACBD6	Q9BR61	282 aa		7.7	□□□□□ -1.18
CAST-231	ENST00000510245	TTLL2	Q9BWV7	592 aa		7.7	□□□□□ -1.18
CAST-231	ENST00000510245	B3GNT5	Q9BYG0	378 aa		7.7	□□□□□ -1.18
CAST-231	ENST00000510245	PABPC3	Q9H361	631 aa	Known RBP	7.7	□□□□□ -1.18
CAST-231	ENST00000510245	POLD4	Q9HCU8	107 aa		7.7	□□□□□ -1.18
CAST-231	ENST00000510245	ORC3	Q9UBD5	711 aa	Predicted RBP	7.7	□□□□□ -1.18
CAST-231	ENST00000510245	TRPS1	Q9UHF7	1281 aa		7.7	□□□□□ -1.18
CAST-231	ENST00000510245	LSM7	Q9UK45	103 aa	Known RBP	7.7	□□□□□ -1.18
CAST-231	ENST00000510245	SCML1	Q9UN30	329 aa		7.7	□□□□□ -1.18
CAST-231	ENST00000510245	LOXL2	Q9Y4K0	774 aa		7.7	□□□□□ -1.18
CAST-231	ENST00000510245	RP1L1	Q8IWN7	2480 aa	Predicted RBP	7.69	□□□□□ -1.18
CAST-231	ENST00000510245	PLXNA2	O75051	1894 aa		7.69	□□□□□ -1.18
CAST-231	ENST00000510245	CSMD2	Q7Z408	3487 aa		7.69	□□□□□ -1.18
CAST-231	ENST00000510245	KLF18	A0A0U1RQI7	1052 aa		7.69	□□□□□ -1.18
CAST-231	ENST00000510245		H3BML4	177 aa		7.69	□□□□□ -1.18
CAST-231	ENST00000510245	MKRN2OS	H3BPM6	223 aa		7.69	□□□□□ -1.18
CAST-231	ENST00000510245	STMND1	H3BQB6	276 aa		7.69	□□□□□ -1.18
CAST-231	ENST00000510245	TPP1	O14773	563 aa		7.69	□□□□□ -1.18

Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms