RNA–Protein interactions for RNA: ENST00000509043.1

HTT-205, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 380 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-205ENST00000509043 CDC16Q13042 620 aa9.23□□□□□ -0.93
HTT-205ENST00000509043 USP4Q13107 963 aa9.23□□□□□ -0.93
HTT-205ENST00000509043 DMC1Q14565 340 aa9.23□□□□□ -0.93
HTT-205ENST00000509043 NAA25Q14CX7 972 aa9.23□□□□□ -0.93
HTT-205ENST00000509043 MAPRE2Q15555 327 aa9.23□□□□□ -0.93
HTT-205ENST00000509043 PREPLQ4J6C6 727 aaPredicted RBP9.23□□□□□ -0.93
HTT-205ENST00000509043 ARHGAP15Q53QZ3 475 aa9.23□□□□□ -0.93
HTT-205ENST00000509043 ZNF789Q5FWF6 425 aa9.23□□□□□ -0.93
HTT-205ENST00000509043 TXNDC8Q6A555 127 aa9.23□□□□□ -0.93
HTT-205ENST00000509043 FAM117BQ6P1L5 589 aa9.23□□□□□ -0.93
HTT-205ENST00000509043 ZNF549Q6P9A3 640 aa9.23□□□□□ -0.93
HTT-205ENST00000509043 PSRC1Q6PGN9 363 aaPredicted RBP9.23□□□□□ -0.93
HTT-205ENST00000509043 TXNDC11Q6PKC3 985 aa9.23□□□□□ -0.93
HTT-205ENST00000509043 FRMD7Q6ZUT3 714 aa9.23□□□□□ -0.93
HTT-205ENST00000509043 GAREM2Q75VX8 874 aa9.23□□□□□ -0.93
HTT-205ENST00000509043 C16orf59Q7L2K0 433 aa9.23□□□□□ -0.93
HTT-205ENST00000509043 ISCA2Q86U28 154 aa9.23□□□□□ -0.93
HTT-205ENST00000509043 SCUBE1Q8IWY4 988 aa9.23□□□□□ -0.93
HTT-205ENST00000509043 LSMEM2Q8N112 164 aa9.23□□□□□ -0.93
HTT-205ENST00000509043 TTC30BQ8N4P2 665 aa9.23□□□□□ -0.93
HTT-205ENST00000509043 CCNYL1Q8N7R7 359 aa9.23□□□□□ -0.93
HTT-205ENST00000509043 KDM1BQ8NB78 822 aa9.23□□□□□ -0.93
HTT-205ENST00000509043 TXNDC5Q8NBS9 432 aaKnown RBP9.23□□□□□ -0.93
HTT-205ENST00000509043 KREMEN2Q8NCW0 462 aa9.23□□□□□ -0.93
HTT-205ENST00000509043 RBM15BQ8NDT2 890 aaKnown RBP9.23□□□□□ -0.93
HTT-205ENST00000509043 OR13C4Q8NGS5 318 aa9.23□□□□□ -0.93
HTT-205ENST00000509043 CEP70Q8NHQ1 597 aa9.23□□□□□ -0.93
HTT-205ENST00000509043 RP9Q8TA86 221 aaKnown RBP9.23□□□□□ -0.93
HTT-205ENST00000509043 SP7Q8TDD2 431 aaPredicted RBP9.23□□□□□ -0.93
HTT-205ENST00000509043 AGAP11Q8TF27 550 aa9.23□□□□□ -0.93
HTT-205ENST00000509043 DDI1Q8WTU0 396 aa9.23□□□□□ -0.93
HTT-205ENST00000509043 KCNJ9Q92806 393 aa9.23□□□□□ -0.93
HTT-205ENST00000509043 STMN2Q93045 179 aa9.23□□□□□ -0.93
HTT-205ENST00000509043 KIAA1191Q96A73 305 aa9.23□□□□□ -0.93
HTT-205ENST00000509043 OTUB2Q96DC9 234 aa9.23□□□□□ -0.93
HTT-205ENST00000509043 MYO19Q96H55 970 aa9.23□□□□□ -0.93
HTT-205ENST00000509043 PRR11Q96HE9 360 aaPredicted RBP9.23□□□□□ -0.93
HTT-205ENST00000509043 RAD9AQ99638 391 aa9.23□□□□□ -0.93
HTT-205ENST00000509043 RTKNQ9BST9 563 aa9.23□□□□□ -0.93
HTT-205ENST00000509043 ERVK-6Q9BXR3 956 aa9.23□□□□□ -0.93
HTT-205ENST00000509043 CEP44Q9C0F1 390 aa9.23□□□□□ -0.93
HTT-205ENST00000509043 ATP13A3Q9H7F0 1226 aa9.23□□□□□ -0.93
HTT-205ENST00000509043 PFDN4Q9NQP4 134 aa9.23□□□□□ -0.93
HTT-205ENST00000509043 ABCB8Q9NUT2 735 aa9.23□□□□□ -0.93
HTT-205ENST00000509043 CFAP97Q9P2B7 532 aa9.23□□□□□ -0.93
HTT-205ENST00000509043 STOML1Q9UBI4 398 aa9.23□□□□□ -0.93
HTT-205ENST00000509043 APPL1Q9UKG1 709 aa9.23□□□□□ -0.93
HTT-205ENST00000509043 PLA2G4CQ9UP65 541 aa9.23□□□□□ -0.93
HTT-205ENST00000509043 KCTD3Q9Y597 815 aa9.23□□□□□ -0.93
HTT-205ENST00000509043 SPO11Q9Y5K1 396 aa9.23□□□□□ -0.93
HTT-205ENST00000509043 OAS3Q9Y6K5 1087 aaKnown RBP9.23□□□□□ -0.93
HTT-205ENST00000509043 HTTP42858 3142 aa9.23□□□□□ -0.93
HTT-205ENST00000509043 MYLKQ15746 1914 aa9.23□□□□□ -0.93
HTT-205ENST00000509043 GRID2O43424 1007 aa9.22□□□□□ -0.93
HTT-205ENST00000509043 KERAO60938 352 aa9.22□□□□□ -0.93
HTT-205ENST00000509043 PEX11AO75192 247 aa9.22□□□□□ -0.93
HTT-205ENST00000509043 VPS4BO75351 444 aa9.22□□□□□ -0.93
HTT-205ENST00000509043 SRP72O76094 671 aaKnown RBP9.22□□□□□ -0.93
HTT-205ENST00000509043 RHOBTB1O94844 696 aa9.22□□□□□ -0.93
HTT-205ENST00000509043 PGLSO95336 258 aa9.22□□□□□ -0.93
HTT-205ENST00000509043 CHRNGP07510 517 aa9.22□□□□□ -0.93
HTT-205ENST00000509043 FGF4P08620 206 aa9.22□□□□□ -0.93
HTT-205ENST00000509043 HNRNPA1P09651 372 aaKnown RBP eCLIP9.22□□□□□ -0.93
HTT-205ENST00000509043 PKMP14618 531 aaKnown RBP9.22□□□□□ -0.93
HTT-205ENST00000509043 TCF3P15923 654 aa9.22□□□□□ -0.93
HTT-205ENST00000509043 RPS3P23396 243 aaKnown RBP eCLIP9.22□□□□□ -0.93
HTT-205ENST00000509043 SP100P23497 879 aaPredicted RBP9.22□□□□□ -0.93
HTT-205ENST00000509043 NFKBIAP25963 317 aa9.22□□□□□ -0.93
HTT-205ENST00000509043 MZF1P28698 734 aaPredicted RBP9.22□□□□□ -0.93
HTT-205ENST00000509043 SERPINA4P29622 427 aa9.22□□□□□ -0.93
HTT-205ENST00000509043 ATP4BP51164 291 aa9.22□□□□□ -0.93
HTT-205ENST00000509043 HTRA3P83110 453 aa9.22□□□□□ -0.93
HTT-205ENST00000509043 CACNG1Q06432 222 aa9.22□□□□□ -0.93
HTT-205ENST00000509043 BCL2L1Q07817 233 aa9.22□□□□□ -0.93
HTT-205ENST00000509043 KLF10Q13118 480 aa9.22□□□□□ -0.93
HTT-205ENST00000509043 UBAP2LQ14157 1087 aaKnown RBP9.22□□□□□ -0.93
HTT-205ENST00000509043 ZNF460Q14592 562 aa9.22□□□□□ -0.93
HTT-205ENST00000509043 SLC9B1Q4ZJI4 515 aa9.22□□□□□ -0.93
HTT-205ENST00000509043 PPM1LQ5SGD2 360 aa9.22□□□□□ -0.93
HTT-205ENST00000509043 ZNF678Q5SXM1 525 aa9.22□□□□□ -0.93
HTT-205ENST00000509043 GPR158Q5T848 1215 aa9.22□□□□□ -0.93
HTT-205ENST00000509043 ZDHHC20Q5W0Z9 365 aa9.22□□□□□ -0.93
HTT-205ENST00000509043 ELMSAN1Q6PJG2 1045 aa9.22□□□□□ -0.93
HTT-205ENST00000509043 C16orf89Q6UX73 402 aa9.22□□□□□ -0.93
HTT-205ENST00000509043 EFL1Q7Z2Z2 1120 aaKnown RBP9.22□□□□□ -0.93
HTT-205ENST00000509043 PLPP6Q8IY26 295 aa9.22□□□□□ -0.93
HTT-205ENST00000509043 CBARPQ8N350 705 aaPredicted RBP9.22□□□□□ -0.93
HTT-205ENST00000509043 EFHBQ8N7U6 833 aa9.22□□□□□ -0.93
HTT-205ENST00000509043 MDGA1Q8NFP4 955 aa9.22□□□□□ -0.93
HTT-205ENST00000509043 ANKRD49Q8WVL7 239 aa9.22□□□□□ -0.93
HTT-205ENST00000509043 JADE3Q92613 823 aa9.22□□□□□ -0.93
HTT-205ENST00000509043 WBP2Q969T9 261 aa9.22□□□□□ -0.93
HTT-205ENST00000509043 SLC22A12Q96S37 553 aa9.22□□□□□ -0.93
HTT-205ENST00000509043 LYSMD1Q96S90 227 aa9.22□□□□□ -0.93
HTT-205ENST00000509043 CYP2S1Q96SQ9 504 aa9.22□□□□□ -0.93
HTT-205ENST00000509043 CCT7Q99832 543 aa9.22□□□□□ -0.93
HTT-205ENST00000509043 ZBED2Q9BTP6 218 aa9.22□□□□□ -0.93
HTT-205ENST00000509043 C1QTNF3Q9BXJ4 246 aa9.22□□□□□ -0.93
HTT-205ENST00000509043 DENND2DQ9H6A0 471 aaPredicted RBP9.22□□□□□ -0.93
HTT-205ENST00000509043 ZNF385DQ9H6B1 395 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms