RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 ARPINQ7Z6K5 226 aa11.04□□□□□ -0.64
SH3RF1-203ENST00000508685 DNAJB7Q7Z6W7 309 aaPredicted RBP11.04□□□□□ -0.64
SH3RF1-203ENST00000508685 TTC16Q8NEE8 873 aa11.04□□□□□ -0.64
SH3RF1-203ENST00000508685 TRMT2BQ96GJ1 504 aaKnown RBP11.04□□□□□ -0.64
SH3RF1-203ENST00000508685 WDR55Q9H6Y2 383 aaPredicted RBP11.04□□□□□ -0.64
SH3RF1-203ENST00000508685 MRPL17Q9NRX2 175 aaKnown RBP11.04□□□□□ -0.64
SH3RF1-203ENST00000508685 ETAA1Q9NY74 926 aa11.04□□□□□ -0.64
SH3RF1-203ENST00000508685 HSFX1Q9UBD0 423 aa11.04□□□□□ -0.64
SH3RF1-203ENST00000508685 ZDHHC2Q9UIJ5 367 aa11.04□□□□□ -0.64
SH3RF1-203ENST00000508685 INSL5Q9Y5Q6 135 aa11.04□□□□□ -0.64
SH3RF1-203ENST00000508685 PTPRSQ13332 1948 aa11.03□□□□□ -0.64
SH3RF1-203ENST00000508685 H3BNC9 293 aa11.03□□□□□ -0.64
SH3RF1-203ENST00000508685 TRIM38O00635 465 aa11.03□□□□□ -0.64
SH3RF1-203ENST00000508685 DLX3O60479 287 aa11.03□□□□□ -0.64
SH3RF1-203ENST00000508685 DNAJA2O60884 412 aa11.03□□□□□ -0.64
SH3RF1-203ENST00000508685 SORBS2O94875 1100 aaKnown RBP11.03□□□□□ -0.64
SH3RF1-203ENST00000508685 VAPBO95292 243 aa11.03□□□□□ -0.64
SH3RF1-203ENST00000508685 CLPTM1O96005 669 aa11.03□□□□□ -0.64
SH3RF1-203ENST00000508685 AHSGP02765 367 aa11.03□□□□□ -0.64
SH3RF1-203ENST00000508685 CHRNGP07510 517 aa11.03□□□□□ -0.64
SH3RF1-203ENST00000508685 SBK3P0C264 359 aa11.03□□□□□ -0.64
SH3RF1-203ENST00000508685 HOXD9P28356 352 aaPredicted RBP11.03□□□□□ -0.64
SH3RF1-203ENST00000508685 EPHA3P29320 983 aa11.03□□□□□ -0.64
SH3RF1-203ENST00000508685 PGGT1BP53609 377 aa11.03□□□□□ -0.64
SH3RF1-203ENST00000508685 SLC12A2P55011 1212 aa11.03□□□□□ -0.64
SH3RF1-203ENST00000508685 IL10RBQ08334 325 aa11.03□□□□□ -0.64
SH3RF1-203ENST00000508685 TRAP1Q12931 704 aaKnown RBP11.03□□□□□ -0.64
SH3RF1-203ENST00000508685 SEPT6Q14141 434 aa11.03□□□□□ -0.64
SH3RF1-203ENST00000508685 VEPH1Q14D04 833 aa11.03□□□□□ -0.64
SH3RF1-203ENST00000508685 ACBD5Q5T8D3 534 aaPredicted RBP11.03□□□□□ -0.64
SH3RF1-203ENST00000508685 IRAK1BP1Q5VVH5 260 aa11.03□□□□□ -0.64
SH3RF1-203ENST00000508685 NXNQ6DKJ4 435 aa11.03□□□□□ -0.64
SH3RF1-203ENST00000508685 C16orf59Q7L2K0 433 aa11.03□□□□□ -0.64
SH3RF1-203ENST00000508685 TICAM1Q8IUC6 712 aa11.03□□□□□ -0.64
SH3RF1-203ENST00000508685 PIAS4Q8N2W9 510 aaPredicted RBP11.03□□□□□ -0.64
SH3RF1-203ENST00000508685 TEX26Q8N6G2 289 aa11.03□□□□□ -0.64
SH3RF1-203ENST00000508685 OR7D4Q8NG98 312 aa11.03□□□□□ -0.64
SH3RF1-203ENST00000508685 SHKBP1Q8TBC3 707 aa11.03□□□□□ -0.64
SH3RF1-203ENST00000508685 ARRDC2Q8TBH0 407 aa11.03□□□□□ -0.64
SH3RF1-203ENST00000508685 CALML6Q8TD86 181 aa11.03□□□□□ -0.64
SH3RF1-203ENST00000508685 FATE1Q969F0 183 aa11.03□□□□□ -0.64
SH3RF1-203ENST00000508685 RCN3Q96D15 328 aa11.03□□□□□ -0.64
SH3RF1-203ENST00000508685 NUF2Q9BZD4 464 aa11.03□□□□□ -0.64
SH3RF1-203ENST00000508685 ZNF696Q9H7X3 374 aa11.03□□□□□ -0.64
SH3RF1-203ENST00000508685 PDFQ9HBH1 243 aa11.03□□□□□ -0.64
SH3RF1-203ENST00000508685 ZNF334Q9HCZ1 680 aaPredicted RBP11.03□□□□□ -0.64
SH3RF1-203ENST00000508685 PRKAG2Q9UGJ0 569 aa11.03□□□□□ -0.64
SH3RF1-203ENST00000508685 AGO1Q9UL18 857 aaKnown RBP11.03□□□□□ -0.64
SH3RF1-203ENST00000508685 TCAF1Q9Y4C2 921 aa11.03□□□□□ -0.64
SH3RF1-203ENST00000508685 KIAA1671Q9BY89 1806 aa11.03□□□□□ -0.64
SH3RF1-203ENST00000508685 PRSS51A0A1B0GVH4 220 aa11.02□□□□□ -0.64
SH3RF1-203ENST00000508685 FAM95CA0A1B0GW59 222 aa11.02□□□□□ -0.64
SH3RF1-203ENST00000508685 ARHGAP10A1A4S6 786 aa11.02□□□□□ -0.64
SH3RF1-203ENST00000508685 CAPN8A6NHC0 703 aa11.02□□□□□ -0.64
SH3RF1-203ENST00000508685 ZBBXA8MT70 800 aa11.02□□□□□ -0.64
SH3RF1-203ENST00000508685 TK2O00142 265 aa11.02□□□□□ -0.64
SH3RF1-203ENST00000508685 KIAA0355O15063 1070 aa11.02□□□□□ -0.64
SH3RF1-203ENST00000508685 TSPAN3O60637 253 aa11.02□□□□□ -0.64
SH3RF1-203ENST00000508685 PRAMEF11O60813 436 aa11.02□□□□□ -0.64
SH3RF1-203ENST00000508685 FGF18O76093 207 aa11.02□□□□□ -0.64
SH3RF1-203ENST00000508685 PENKP01210 267 aaPredicted RBP11.02□□□□□ -0.64
SH3RF1-203ENST00000508685 RBP1P09455 135 aa11.02□□□□□ -0.64
SH3RF1-203ENST00000508685 ARCN1P48444 511 aaKnown RBP11.02□□□□□ -0.64
SH3RF1-203ENST00000508685 THOP1P52888 689 aa11.02□□□□□ -0.64
SH3RF1-203ENST00000508685 YBEYP58557 167 aaPredicted RBP11.02□□□□□ -0.64
SH3RF1-203ENST00000508685 ZXDBP98169 803 aa11.02□□□□□ -0.64
SH3RF1-203ENST00000508685 CREB5Q02930 508 aa11.02□□□□□ -0.64
SH3RF1-203ENST00000508685 C5orf22Q49AR2 442 aa11.02□□□□□ -0.64
SH3RF1-203ENST00000508685 KIAA0930Q6ICG6 404 aaPredicted RBP11.02□□□□□ -0.64
SH3RF1-203ENST00000508685 CHSY3Q70JA7 882 aa11.02□□□□□ -0.64
SH3RF1-203ENST00000508685 DENND6AQ8IWF6 608 aa11.02□□□□□ -0.64
SH3RF1-203ENST00000508685 TCEAL8Q8IYN2 117 aa11.02□□□□□ -0.64
SH3RF1-203ENST00000508685 LSMEM2Q8N112 164 aa11.02□□□□□ -0.64
SH3RF1-203ENST00000508685 TMEM199Q8N511 208 aa11.02□□□□□ -0.64
SH3RF1-203ENST00000508685 KDM1BQ8NB78 822 aa11.02□□□□□ -0.64
SH3RF1-203ENST00000508685 KCTD4Q8WVF5 259 aa11.02□□□□□ -0.64
SH3RF1-203ENST00000508685 PLD4Q96BZ4 506 aa11.02□□□□□ -0.64
SH3RF1-203ENST00000508685 ASB9Q96DX5 294 aa11.02□□□□□ -0.64
SH3RF1-203ENST00000508685 TSPAN17Q96FV3 270 aa11.02□□□□□ -0.64
SH3RF1-203ENST00000508685 GCNAQ96QF7 691 aa11.02□□□□□ -0.64
SH3RF1-203ENST00000508685 SUDS3Q9H7L9 328 aaPredicted RBP11.02□□□□□ -0.64
SH3RF1-203ENST00000508685 TRPC7Q9HCX4 862 aa11.02□□□□□ -0.64
SH3RF1-203ENST00000508685 PTTG2Q9NZH5 202 aa11.02□□□□□ -0.64
SH3RF1-203ENST00000508685 UXTQ9UBK9 157 aaPredicted RBP11.02□□□□□ -0.64
SH3RF1-203ENST00000508685 SUCOQ9UBS9 1254 aaKnown RBP11.02□□□□□ -0.64
SH3RF1-203ENST00000508685 RIMS3Q9UJD0 308 aa11.02□□□□□ -0.64
SH3RF1-203ENST00000508685 KLHL33A6NCF5 533 aa11.02□□□□□ -0.65
SH3RF1-203ENST00000508685 NEMP1O14524 444 aa11.02□□□□□ -0.65
SH3RF1-203ENST00000508685 CNPP09543 421 aaKnown RBP11.02□□□□□ -0.65
SH3RF1-203ENST00000508685 LINC00271P0C7V0 271 aa11.02□□□□□ -0.65
SH3RF1-203ENST00000508685 ENO3P13929 434 aaPredicted RBP11.02□□□□□ -0.65
SH3RF1-203ENST00000508685 SYN1P17600 705 aa11.02□□□□□ -0.65
SH3RF1-203ENST00000508685 GABRB3P28472 473 aa11.02□□□□□ -0.65
SH3RF1-203ENST00000508685 CD151P48509 253 aa11.02□□□□□ -0.65
SH3RF1-203ENST00000508685 GNA12Q03113 381 aa11.02□□□□□ -0.65
SH3RF1-203ENST00000508685 CTBP1Q13363 440 aa11.02□□□□□ -0.65
SH3RF1-203ENST00000508685 PEX6Q13608 980 aa11.02□□□□□ -0.65
SH3RF1-203ENST00000508685 CEACAM7Q14002 265 aa11.02□□□□□ -0.65
SH3RF1-203ENST00000508685 SQLEQ14534 574 aa11.02□□□□□ -0.65
SH3RF1-203ENST00000508685 ZNF235Q14590 738 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms