RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 HDAC11Q96DB2 347 aa14.26□□□□□ -0.13
RAB28-205ENST00000508274 NAF1Q96HR8 494 aaKnown RBP14.26□□□□□ -0.13
RAB28-205ENST00000508274 CCDC42Q96M95 316 aa14.26□□□□□ -0.13
RAB28-205ENST00000508274 LGMNQ99538 433 aa14.26□□□□□ -0.13
RAB28-205ENST00000508274 TDRD1Q9BXT4 1180 aaKnown RBP14.26□□□□□ -0.13
RAB28-205ENST00000508274 TEX101Q9BY14 249 aa14.26□□□□□ -0.13
RAB28-205ENST00000508274 POLR1BQ9H9Y6 1135 aa14.26□□□□□ -0.13
RAB28-205ENST00000508274 CARS2Q9HA77 564 aaKnown RBP14.26□□□□□ -0.13
RAB28-205ENST00000508274 ASCL3Q9NQ33 180 aa14.26□□□□□ -0.13
RAB28-205ENST00000508274 HYOU1Q9Y4L1 999 aa14.26□□□□□ -0.13
RAB28-205ENST00000508274 ZFC3H1O60293 1989 aaKnown RBP14.26□□□□□ -0.13
RAB28-205ENST00000508274 A0A0J9YYE9 177 aa14.26□□□□□ -0.13
RAB28-205ENST00000508274 C3orf70A6NLC5 250 aaPredicted RBP14.26□□□□□ -0.13
RAB28-205ENST00000508274 NTN3O00634 580 aaPredicted RBP14.26□□□□□ -0.13
RAB28-205ENST00000508274 RRP8O43159 456 aaKnown RBP14.26□□□□□ -0.13
RAB28-205ENST00000508274 NOBOXO60393 691 aa14.26□□□□□ -0.13
RAB28-205ENST00000508274 TCEA3O75764 348 aa14.26□□□□□ -0.13
RAB28-205ENST00000508274 SOD1P00441 154 aa14.26□□□□□ -0.13
RAB28-205ENST00000508274 PRLP01236 227 aa14.26□□□□□ -0.13
RAB28-205ENST00000508274 TRBC1P01850 177 aa14.26□□□□□ -0.13
RAB28-205ENST00000508274 CEACAM5P06731 702 aa14.26□□□□□ -0.13
RAB28-205ENST00000508274 NFKBIAP25963 317 aa14.26□□□□□ -0.13
RAB28-205ENST00000508274 LSSP48449 732 aa14.26□□□□□ -0.13
RAB28-205ENST00000508274 EPHB1P54762 984 aa14.26□□□□□ -0.13
RAB28-205ENST00000508274 CCL7P80098 99 aa14.26□□□□□ -0.13
RAB28-205ENST00000508274 TSR1Q2NL82 804 aaKnown RBP14.26□□□□□ -0.13
RAB28-205ENST00000508274 LRRC69Q6ZNQ3 347 aa14.26□□□□□ -0.13
RAB28-205ENST00000508274 TECPR1Q7Z6L1 1165 aa14.26□□□□□ -0.13
RAB28-205ENST00000508274 B3GNT8Q7Z7M8 397 aa14.26□□□□□ -0.13
RAB28-205ENST00000508274 CCNYQ8ND76 341 aa14.26□□□□□ -0.13
RAB28-205ENST00000508274 TPCN2Q8NHX9 752 aa14.26□□□□□ -0.13
RAB28-205ENST00000508274 FATE1Q969F0 183 aa14.26□□□□□ -0.13
RAB28-205ENST00000508274 FRMD8Q9BZ67 464 aaPredicted RBP14.26□□□□□ -0.13
RAB28-205ENST00000508274 PHPT1Q9NRX4 125 aaPredicted RBP14.26□□□□□ -0.13
RAB28-205ENST00000508274 LCMT1Q9UIC8 334 aa14.26□□□□□ -0.13
RAB28-205ENST00000508274 ATMQ13315 3056 aa14.25□□□□□ -0.13
RAB28-205ENST00000508274 A0A1W2PQM1 296 aa14.25□□□□□ -0.13
RAB28-205ENST00000508274 CAPN8A6NHC0 703 aa14.25□□□□□ -0.13
RAB28-205ENST00000508274 KCNK1O00180 336 aa14.25□□□□□ -0.13
RAB28-205ENST00000508274 DXOO77932 396 aaKnown RBP14.25□□□□□ -0.13
RAB28-205ENST00000508274 MTA2O94776 668 aa14.25□□□□□ -0.13
RAB28-205ENST00000508274 MMP2P08253 660 aa14.25□□□□□ -0.13
RAB28-205ENST00000508274 MX2P20592 715 aa14.25□□□□□ -0.13
RAB28-205ENST00000508274 POLD2P49005 469 aa14.25□□□□□ -0.13
RAB28-205ENST00000508274 PTSQ03393 145 aa14.25□□□□□ -0.13
RAB28-205ENST00000508274 ZBTB17Q13105 803 aa14.25□□□□□ -0.13
RAB28-205ENST00000508274 TBX2Q13207 712 aaPredicted RBP14.25□□□□□ -0.13
RAB28-205ENST00000508274 FOXR1Q6PIV2 292 aa14.25□□□□□ -0.13
RAB28-205ENST00000508274 NPNTQ6UXI9 565 aa14.25□□□□□ -0.13
RAB28-205ENST00000508274 TRIM74Q86UV6 250 aa14.25□□□□□ -0.13
RAB28-205ENST00000508274 CCDC13Q8IYE1 715 aa14.25□□□□□ -0.13
RAB28-205ENST00000508274 LPCAT1Q8NF37 534 aa14.25□□□□□ -0.13
RAB28-205ENST00000508274 SCAMP4Q969E2 229 aa14.25□□□□□ -0.13
RAB28-205ENST00000508274 PRR11Q96HE9 360 aaPredicted RBP14.25□□□□□ -0.13
RAB28-205ENST00000508274 HIC2Q96JB3 615 aa14.25□□□□□ -0.13
RAB28-205ENST00000508274 ZNF578Q96N58 590 aaPredicted RBP14.25□□□□□ -0.13
RAB28-205ENST00000508274 BBC3Q96PG8 261 aaPredicted RBP14.25□□□□□ -0.13
RAB28-205ENST00000508274 CEP41Q9BYV8 373 aa14.25□□□□□ -0.13
RAB28-205ENST00000508274 ABCG8Q9H221 673 aa14.25□□□□□ -0.13
RAB28-205ENST00000508274 DPEP2Q9H4A9 486 aa14.25□□□□□ -0.13
RAB28-205ENST00000508274 SUFUQ9UMX1 484 aa14.25□□□□□ -0.13
RAB28-205ENST00000508274 HEY1Q9Y5J3 304 aa14.25□□□□□ -0.13
RAB28-205ENST00000508274 ST14Q9Y5Y6 855 aa14.25□□□□□ -0.13
RAB28-205ENST00000508274 SCN8AQ9UQD0 1980 aa14.24□□□□□ -0.13
RAB28-205ENST00000508274 PDE2AO00408 941 aaPredicted RBP14.24□□□□□ -0.13
RAB28-205ENST00000508274 JCHAINP01591 159 aa14.24□□□□□ -0.13
RAB28-205ENST00000508274 KRT1P04264 644 aa14.24□□□□□ -0.13
RAB28-205ENST00000508274 RPLP0P05388 317 aaKnown RBP14.24□□□□□ -0.13
RAB28-205ENST00000508274 TNNT1P13805 278 aa14.24□□□□□ -0.13
RAB28-205ENST00000508274 AK4P27144 223 aaPredicted RBP14.24□□□□□ -0.13
RAB28-205ENST00000508274 GNPDA1P46926 289 aa14.24□□□□□ -0.13
RAB28-205ENST00000508274 PCBP4P57723 403 aaKnown RBP14.24□□□□□ -0.13
RAB28-205ENST00000508274 PPIDQ08752 370 aaKnown RBP14.24□□□□□ -0.13
RAB28-205ENST00000508274 SOWAHCQ53LP3 525 aaPredicted RBP14.24□□□□□ -0.13
RAB28-205ENST00000508274 SLC9A4Q6AI14 798 aa14.24□□□□□ -0.13
RAB28-205ENST00000508274 OGFOD3Q6PK18 319 aa14.24□□□□□ -0.13
RAB28-205ENST00000508274 DOK6Q6PKX4 331 aa14.24□□□□□ -0.13
RAB28-205ENST00000508274 B4GALNT4Q76KP1 1039 aa14.24□□□□□ -0.13
RAB28-205ENST00000508274 NRROSQ86YC3 692 aa14.24□□□□□ -0.13
RAB28-205ENST00000508274 SPACA3Q8IXA5 215 aa14.24□□□□□ -0.13
RAB28-205ENST00000508274 RHOT2Q8IXI1 618 aa14.24□□□□□ -0.13
RAB28-205ENST00000508274 CNTD1Q8N815 330 aa14.24□□□□□ -0.13
RAB28-205ENST00000508274 Q8N9G6 341 aaPredicted RBP14.24□□□□□ -0.13
RAB28-205ENST00000508274 AGAP2Q99490 1192 aa14.24□□□□□ -0.13
RAB28-205ENST00000508274 FOXP3Q9BZS1 431 aa14.24□□□□□ -0.13
RAB28-205ENST00000508274 PCDH9Q9HC56 1237 aa14.24□□□□□ -0.13
RAB28-205ENST00000508274 KCTD5Q9NXV2 234 aa14.24□□□□□ -0.13
RAB28-205ENST00000508274 AMACRQ9UHK6 382 aa14.24□□□□□ -0.13
RAB28-205ENST00000508274 RNF215Q9Y6U7 377 aa14.24□□□□□ -0.13
RAB28-205ENST00000508274 AKR1B15C9JRZ8 316 aaPredicted RBP14.23□□□□□ -0.13
RAB28-205ENST00000508274 D6RAR5 112 aa14.23□□□□□ -0.13
RAB28-205ENST00000508274 CLDN7O95471 211 aa14.23□□□□□ -0.13
RAB28-205ENST00000508274 CD86P42081 329 aa14.23□□□□□ -0.13
RAB28-205ENST00000508274 ARHGAP25P42331 645 aa14.23□□□□□ -0.13
RAB28-205ENST00000508274 GPR1P46091 355 aa14.23□□□□□ -0.13
RAB28-205ENST00000508274 STC1P52823 247 aa14.23□□□□□ -0.13
RAB28-205ENST00000508274 DPTQ07507 201 aa14.23□□□□□ -0.13
RAB28-205ENST00000508274 HLTFQ14527 1009 aaKnown RBP eCLIP14.23□□□□□ -0.13
RAB28-205ENST00000508274 C14orf28Q4W4Y0 310 aa14.23□□□□□ -0.13
RAB28-205ENST00000508274 CERCAMQ5T4B2 595 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms