RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 TCEAL3Q969E4 200 aa10.82□□□□□ -0.68
PDLIM5-210ENST00000508216 TOP1MTQ969P6 601 aa10.82□□□□□ -0.68
PDLIM5-210ENST00000508216 OR5M11Q96RB7 305 aa10.82□□□□□ -0.68
PDLIM5-210ENST00000508216 BDH2Q9BUT1 245 aa10.82□□□□□ -0.68
PDLIM5-210ENST00000508216 TRIM62Q9BVG3 475 aa10.82□□□□□ -0.68
PDLIM5-210ENST00000508216 FAM96AQ9H5X1 160 aa10.82□□□□□ -0.68
PDLIM5-210ENST00000508216 CATSPERBQ9H7T0 1116 aa10.82□□□□□ -0.68
PDLIM5-210ENST00000508216 KLHL1Q9NR64 748 aa10.82□□□□□ -0.68
PDLIM5-210ENST00000508216 HCSTQ9UBK5 93 aa10.82□□□□□ -0.68
PDLIM5-210ENST00000508216 ELF5Q9UKW6 265 aaPredicted RBP10.82□□□□□ -0.68
PDLIM5-210ENST00000508216 MROH6A6NGR9 719 aa10.82□□□□□ -0.68
PDLIM5-210ENST00000508216 SGK1O00141 431 aa10.82□□□□□ -0.68
PDLIM5-210ENST00000508216 TERTO14746 1132 aaKnown RBP10.82□□□□□ -0.68
PDLIM5-210ENST00000508216 HTRA2O43464 458 aaPredicted RBP10.82□□□□□ -0.68
PDLIM5-210ENST00000508216 RPS6KA4O75676 772 aa10.82□□□□□ -0.68
PDLIM5-210ENST00000508216 SLC5A1P13866 664 aa10.82□□□□□ -0.68
PDLIM5-210ENST00000508216 MATN1P21941 496 aa10.82□□□□□ -0.68
PDLIM5-210ENST00000508216 CRHR1P34998 444 aa10.82□□□□□ -0.68
PDLIM5-210ENST00000508216 ADH7P40394 386 aa10.82□□□□□ -0.68
PDLIM5-210ENST00000508216 CLCN5P51795 746 aa10.82□□□□□ -0.68
PDLIM5-210ENST00000508216 AFF1P51825 1210 aaKnown RBP10.82□□□□□ -0.68
PDLIM5-210ENST00000508216 EIF6P56537 245 aaKnown RBP10.82□□□□□ -0.68
PDLIM5-210ENST00000508216 NME5P56597 212 aa10.82□□□□□ -0.68
PDLIM5-210ENST00000508216 GAD2Q05329 585 aa10.82□□□□□ -0.68
PDLIM5-210ENST00000508216 GPR50Q13585 617 aa10.82□□□□□ -0.68
PDLIM5-210ENST00000508216 ZNF267Q14586 743 aaPredicted RBP10.82□□□□□ -0.68
PDLIM5-210ENST00000508216 C21orf62-AS1Q17RA5 79 aa10.82□□□□□ -0.68
PDLIM5-210ENST00000508216 CLLU1Q5K131 121 aa10.82□□□□□ -0.68
PDLIM5-210ENST00000508216 DGKKQ5KSL6 1271 aa10.82□□□□□ -0.68
PDLIM5-210ENST00000508216 GPR158Q5T848 1215 aa10.82□□□□□ -0.68
PDLIM5-210ENST00000508216 TXNDC11Q6PKC3 985 aa10.82□□□□□ -0.68
PDLIM5-210ENST00000508216 POC5Q8NA72 575 aa10.82□□□□□ -0.68
PDLIM5-210ENST00000508216 C11orf65Q8NCR3 313 aa10.82□□□□□ -0.68
PDLIM5-210ENST00000508216 ADAMTS19Q8TE59 1207 aa10.82□□□□□ -0.68
PDLIM5-210ENST00000508216 TUBGCP3Q96CW5 907 aa10.82□□□□□ -0.68
PDLIM5-210ENST00000508216 PGAP3Q96FM1 320 aaPredicted RBP10.82□□□□□ -0.68
PDLIM5-210ENST00000508216 QKIQ96PU8 341 aaKnown RBP eCLIP10.82□□□□□ -0.684e-24■■■■■ 117.3
PDLIM5-210ENST00000508216 GPR61Q9BZJ8 451 aa10.82□□□□□ -0.68
PDLIM5-210ENST00000508216 FAM117AQ9C073 453 aa10.82□□□□□ -0.68
PDLIM5-210ENST00000508216 SPNS1Q9H2V7 528 aa10.82□□□□□ -0.68
PDLIM5-210ENST00000508216 SAV1Q9H4B6 383 aaPredicted RBP10.82□□□□□ -0.68
PDLIM5-210ENST00000508216 ABCC13Q9NSE7 274 aa10.82□□□□□ -0.68
PDLIM5-210ENST00000508216 DNAJC28Q9NX36 388 aa10.82□□□□□ -0.68
PDLIM5-210ENST00000508216 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.82□□□□□ -0.68
PDLIM5-210ENST00000508216 ARMCX1Q9P291 453 aa10.82□□□□□ -0.68
PDLIM5-210ENST00000508216 CTSFQ9UBX1 484 aa10.82□□□□□ -0.68
PDLIM5-210ENST00000508216 ANAPC2Q9UJX6 822 aa10.82□□□□□ -0.68
PDLIM5-210ENST00000508216 FBXO10Q9UK96 956 aa10.82□□□□□ -0.68
PDLIM5-210ENST00000508216 VAV3Q9UKW4 847 aa10.82□□□□□ -0.68
PDLIM5-210ENST00000508216 MRPS23Q9Y3D9 190 aaKnown RBP10.82□□□□□ -0.68
PDLIM5-210ENST00000508216 CRB1P82279 1406 aa10.82□□□□□ -0.68
PDLIM5-210ENST00000508216 LRRC37A3O60309 1634 aa10.82□□□□□ -0.68
PDLIM5-210ENST00000508216 A0A087X0T9 212 aa10.81□□□□□ -0.68
PDLIM5-210ENST00000508216 SDR42E2A6NKP2 422 aa10.81□□□□□ -0.68
PDLIM5-210ENST00000508216 F6X3S4 739 aa10.81□□□□□ -0.68
PDLIM5-210ENST00000508216 L7N2F9 121 aa10.81□□□□□ -0.68
PDLIM5-210ENST00000508216 UBXN8O00124 270 aa10.81□□□□□ -0.68
PDLIM5-210ENST00000508216 EPHB6O15197 1021 aa10.81□□□□□ -0.68
PDLIM5-210ENST00000508216 MMP1P03956 469 aa10.81□□□□□ -0.68
PDLIM5-210ENST00000508216 FBP1P09467 338 aa10.81□□□□□ -0.68
PDLIM5-210ENST00000508216 DARSP14868 501 aaKnown RBP10.81□□□□□ -0.68
PDLIM5-210ENST00000508216 BMP8BP34820 402 aa10.81□□□□□ -0.68
PDLIM5-210ENST00000508216 MCAMP43121 646 aa10.81□□□□□ -0.68
PDLIM5-210ENST00000508216 CDH4P55283 916 aa10.81□□□□□ -0.68
PDLIM5-210ENST00000508216 CHAF1BQ13112 559 aa10.81□□□□□ -0.68
PDLIM5-210ENST00000508216 TRIM25Q14258 630 aaKnown RBP10.81□□□□□ -0.68
PDLIM5-210ENST00000508216 TMED2Q15363 201 aa10.81□□□□□ -0.68
PDLIM5-210ENST00000508216 SEC23AQ15436 765 aa10.81□□□□□ -0.68
PDLIM5-210ENST00000508216 ZNF174Q15697 407 aa10.81□□□□□ -0.68
PDLIM5-210ENST00000508216 HSD17B12Q53GQ0 312 aa10.81□□□□□ -0.68
PDLIM5-210ENST00000508216 LBHQ53QV2 105 aaPredicted RBP10.81□□□□□ -0.68
PDLIM5-210ENST00000508216 ZNF484Q5JVG2 852 aa10.81□□□□□ -0.68
PDLIM5-210ENST00000508216 OVCH2Q7RTZ1 564 aa10.81□□□□□ -0.68
PDLIM5-210ENST00000508216 BMP8AQ7Z5Y6 402 aa10.81□□□□□ -0.68
PDLIM5-210ENST00000508216 DGKHQ86XP1 1220 aa10.81□□□□□ -0.68
PDLIM5-210ENST00000508216 TBC1D10CQ8IV04 446 aa10.81□□□□□ -0.68
PDLIM5-210ENST00000508216 ARHGEF19Q8IW93 802 aa10.81□□□□□ -0.68
PDLIM5-210ENST00000508216 PHC2Q8IXK0 858 aa10.81□□□□□ -0.68
PDLIM5-210ENST00000508216 SLC43A2Q8N370 569 aa10.81□□□□□ -0.68
PDLIM5-210ENST00000508216 PCDH20Q8N6Y1 951 aaKnown RBP10.81□□□□□ -0.68
PDLIM5-210ENST00000508216 PRELID2Q8N945 189 aa10.81□□□□□ -0.68
PDLIM5-210ENST00000508216 FAM47BQ8NA70 645 aa10.81□□□□□ -0.68
PDLIM5-210ENST00000508216 ST8SIA2Q92186 375 aa10.81□□□□□ -0.68
PDLIM5-210ENST00000508216 HTRA1Q92743 480 aa10.81□□□□□ -0.68
PDLIM5-210ENST00000508216 CD101Q93033 1021 aa10.81□□□□□ -0.68
PDLIM5-210ENST00000508216 P2RX5Q93086 422 aa10.81□□□□□ -0.68
PDLIM5-210ENST00000508216 PHKBQ93100 1093 aa10.81□□□□□ -0.68
PDLIM5-210ENST00000508216 CPNE4Q96A23 557 aaPredicted RBP10.81□□□□□ -0.68
PDLIM5-210ENST00000508216 VPS39Q96JC1 886 aa10.81□□□□□ -0.68
PDLIM5-210ENST00000508216 C19orf43Q9BQ61 176 aa10.81□□□□□ -0.68
PDLIM5-210ENST00000508216 PAPOLGQ9BWT3 736 aaKnown RBP10.81□□□□□ -0.68
PDLIM5-210ENST00000508216 UCK2Q9BZX2 261 aa10.81□□□□□ -0.68
PDLIM5-210ENST00000508216 ROGDIQ9GZN7 287 aa10.81□□□□□ -0.68
PDLIM5-210ENST00000508216 ERVK-5Q9HDB9 667 aa10.81□□□□□ -0.68
PDLIM5-210ENST00000508216 MRPS30Q9NP92 439 aaKnown RBP10.81□□□□□ -0.68
PDLIM5-210ENST00000508216 SETD4Q9NVD3 440 aa10.81□□□□□ -0.68
PDLIM5-210ENST00000508216 MED9Q9NWA0 146 aa10.81□□□□□ -0.68
PDLIM5-210ENST00000508216 DUS2Q9NX74 493 aaKnown RBP10.81□□□□□ -0.68
PDLIM5-210ENST00000508216 ABCD2Q9UBJ2 740 aa10.81□□□□□ -0.68
PDLIM5-210ENST00000508216 MAD2L2Q9UI95 211 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms