RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 TRIB3Q96RU7 358 aa14.49□□□□□ -0.09
DDX41-208ENST00000507955 CINPQ9BW66 212 aaPredicted RBP14.49□□□□□ -0.09
DDX41-208ENST00000507955 FAM192AQ9GZU8 254 aa14.49□□□□□ -0.09
DDX41-208ENST00000507955 GSTO2Q9H4Y5 243 aa14.49□□□□□ -0.09
DDX41-208ENST00000507955 ZBTB26Q9HCK0 441 aa14.49□□□□□ -0.09
DDX41-208ENST00000507955 CCDC167Q9P0B6 97 aa14.49□□□□□ -0.09
DDX41-208ENST00000507955 C9JVG2 144 aa14.49□□□□□ -0.09
DDX41-208ENST00000507955 OR1I1O60431 355 aa14.49□□□□□ -0.09
DDX41-208ENST00000507955 NPHS1O60500 1241 aa14.49□□□□□ -0.09
DDX41-208ENST00000507955 FOXA1P55317 472 aa14.49□□□□□ -0.09
DDX41-208ENST00000507955 OXCT1P55809 520 aa14.49□□□□□ -0.09
DDX41-208ENST00000507955 PFKFB4Q16877 469 aa14.49□□□□□ -0.09
DDX41-208ENST00000507955 LIN52Q52LA3 116 aa14.49□□□□□ -0.09
DDX41-208ENST00000507955 KYQ8NBH2 561 aa14.49□□□□□ -0.09
DDX41-208ENST00000507955 LPCAT1Q8NF37 534 aa14.49□□□□□ -0.09
DDX41-208ENST00000507955 ZNF296Q8WUU4 475 aaPredicted RBP14.49□□□□□ -0.09
DDX41-208ENST00000507955 ESAMQ96AP7 390 aa14.49□□□□□ -0.09
DDX41-208ENST00000507955 HHIPL1Q96JK4 782 aa14.49□□□□□ -0.09
DDX41-208ENST00000507955 FEM1CQ96JP0 617 aa14.49□□□□□ -0.09
DDX41-208ENST00000507955 CNDP1Q96KN2 507 aa14.49□□□□□ -0.09
DDX41-208ENST00000507955 CATSPERZQ9NTU4 200 aa14.49□□□□□ -0.09
DDX41-208ENST00000507955 UBA2Q9UBT2 640 aaPredicted RBP14.49□□□□□ -0.09
DDX41-208ENST00000507955 VTI1BQ9UEU0 232 aa14.49□□□□□ -0.09
DDX41-208ENST00000507955 AGO1Q9UL18 857 aaKnown RBP14.49□□□□□ -0.09
DDX41-208ENST00000507955 PRRC2BQ5JSZ5 2229 aaKnown RBP14.49□□□□□ -0.09
DDX41-208ENST00000507955 TCAF2A6NFQ2 919 aa14.48□□□□□ -0.09
DDX41-208ENST00000507955 NCF1BA6NI72 391 aaPredicted RBP14.48□□□□□ -0.09
DDX41-208ENST00000507955 NCF1CA8MVU1 366 aaPredicted RBP14.48□□□□□ -0.09
DDX41-208ENST00000507955 H7C4K7 107 aa14.48□□□□□ -0.09
DDX41-208ENST00000507955 SNUPNO95149 360 aaKnown RBP14.48□□□□□ -0.09
DDX41-208ENST00000507955 WISP3O95389 354 aaPredicted RBP14.48□□□□□ -0.09
DDX41-208ENST00000507955 NCF1P14598 390 aaPredicted RBP14.48□□□□□ -0.09
DDX41-208ENST00000507955 CD1DP15813 335 aa14.48□□□□□ -0.09
DDX41-208ENST00000507955 GSTT1P30711 240 aa14.48□□□□□ -0.09
DDX41-208ENST00000507955 ZXDBP98169 803 aa14.48□□□□□ -0.09
DDX41-208ENST00000507955 CEACAM7Q14002 265 aa14.48□□□□□ -0.09
DDX41-208ENST00000507955 HECTD3Q5T447 861 aa14.48□□□□□ -0.09
DDX41-208ENST00000507955 RNF219Q5W0B1 726 aaPredicted RBP14.48□□□□□ -0.09
DDX41-208ENST00000507955 LAYNQ6UX15 382 aa14.48□□□□□ -0.09
DDX41-208ENST00000507955 ISLR2Q6UXK2 745 aa14.48□□□□□ -0.09
DDX41-208ENST00000507955 LCA5Q86VQ0 697 aa14.48□□□□□ -0.09
DDX41-208ENST00000507955 OR6K2Q8NGY2 324 aa14.48□□□□□ -0.09
DDX41-208ENST00000507955 FATE1Q969F0 183 aa14.48□□□□□ -0.09
DDX41-208ENST00000507955 SLC30A3Q99726 388 aa14.48□□□□□ -0.09
DDX41-208ENST00000507955 SPATA16Q9BXB7 569 aa14.48□□□□□ -0.09
DDX41-208ENST00000507955 TRIM4Q9C037 500 aa14.48□□□□□ -0.09
DDX41-208ENST00000507955 MUC3BQ9H195 1237 aa14.48□□□□□ -0.09
DDX41-208ENST00000507955 TRPC7Q9HCX4 862 aa14.48□□□□□ -0.09
DDX41-208ENST00000507955 PCDHGB4Q9UN71 923 aa14.48□□□□□ -0.09
DDX41-208ENST00000507955 PCDHGB5Q9Y5G0 923 aa14.48□□□□□ -0.09
DDX41-208ENST00000507955 RANBP2P49792 3224 aaKnown RBP14.48□□□□□ -0.09
DDX41-208ENST00000507955 A0A1B0GVG6 124 aa14.48□□□□□ -0.09
DDX41-208ENST00000507955 RPP40O75818 363 aaKnown RBP14.48□□□□□ -0.09
DDX41-208ENST00000507955 PRAMEF12O95522 483 aa14.48□□□□□ -0.09
DDX41-208ENST00000507955 FGF1P05230 155 aa14.48□□□□□ -0.09
DDX41-208ENST00000507955 COL6A1P12109 1028 aa14.48□□□□□ -0.09
DDX41-208ENST00000507955 ETS2P15036 469 aa14.48□□□□□ -0.09
DDX41-208ENST00000507955 HLA-DPA1P20036 260 aa14.48□□□□□ -0.09
DDX41-208ENST00000507955 MZF1P28698 734 aaPredicted RBP14.48□□□□□ -0.09
DDX41-208ENST00000507955 SLC11A2P49281 568 aa14.48□□□□□ -0.09
DDX41-208ENST00000507955 DNAJB13P59910 316 aa14.48□□□□□ -0.09
DDX41-208ENST00000507955 SH3BP2P78314 561 aa14.48□□□□□ -0.09
DDX41-208ENST00000507955 MED21Q13503 144 aa14.48□□□□□ -0.09
DDX41-208ENST00000507955 CYTH1Q15438 398 aa14.48□□□□□ -0.09
DDX41-208ENST00000507955 SLC14A2Q15849 920 aa14.48□□□□□ -0.09
DDX41-208ENST00000507955 SETMARQ53H47 684 aaPredicted RBP14.48□□□□□ -0.09
DDX41-208ENST00000507955 UNC50Q53HI1 259 aa14.48□□□□□ -0.09
DDX41-208ENST00000507955 SLC8B1Q6J4K2 584 aa14.48□□□□□ -0.09
DDX41-208ENST00000507955 PAQR3Q6TCH7 311 aa14.48□□□□□ -0.09
DDX41-208ENST00000507955 GLT6D1Q7Z4J2 308 aa14.48□□□□□ -0.09
DDX41-208ENST00000507955 PIANPQ8IYJ0 282 aa14.48□□□□□ -0.09
DDX41-208ENST00000507955 MED16Q9Y2X0 877 aa14.48□□□□□ -0.09
DDX41-208ENST00000507955 CAPN8A6NHC0 703 aa14.47□□□□□ -0.09
DDX41-208ENST00000507955 CASQ2O14958 399 aaPredicted RBP14.47□□□□□ -0.09
DDX41-208ENST00000507955 RHOCP08134 193 aa14.47□□□□□ -0.09
DDX41-208ENST00000507955 RBP1P09455 135 aa14.47□□□□□ -0.09
DDX41-208ENST00000507955 FDXRP22570 491 aa14.47□□□□□ -0.09
DDX41-208ENST00000507955 PRDX6P30041 224 aa14.47□□□□□ -0.09
DDX41-208ENST00000507955 ECT2LQ008S8 904 aa14.47□□□□□ -0.09
DDX41-208ENST00000507955 ZNF678Q5SXM1 525 aa14.47□□□□□ -0.09
DDX41-208ENST00000507955 SPOUT1Q5T280 376 aaKnown RBP14.47□□□□□ -0.09
DDX41-208ENST00000507955 PSAPL1Q6NUJ1 521 aa14.47□□□□□ -0.09
DDX41-208ENST00000507955 PTGR2Q8N8N7 351 aaPredicted RBP14.47□□□□□ -0.09
DDX41-208ENST00000507955 CEP70Q8NHQ1 597 aa14.47□□□□□ -0.09
DDX41-208ENST00000507955 RP9Q8TA86 221 aaKnown RBP14.47□□□□□ -0.09
DDX41-208ENST00000507955 CCDC97Q96F63 343 aaPredicted RBP14.47□□□□□ -0.09
DDX41-208ENST00000507955 TSPAN17Q96FV3 270 aa14.47□□□□□ -0.09
DDX41-208ENST00000507955 PSKH2Q96QS6 385 aa14.47□□□□□ -0.09
DDX41-208ENST00000507955 MGME1Q9BQP7 344 aa14.47□□□□□ -0.09
DDX41-208ENST00000507955 TTLL2Q9BWV7 592 aa14.47□□□□□ -0.09
DDX41-208ENST00000507955 HIPK3Q9H422 1215 aa14.47□□□□□ -0.09
DDX41-208ENST00000507955 TRAF6Q9Y4K3 522 aa14.47□□□□□ -0.09
DDX41-208ENST00000507955 GOLGA8CPA6NN73 597 aa14.47□□□□□ -0.09
DDX41-208ENST00000507955 INSIG1O15503 277 aa14.47□□□□□ -0.09
DDX41-208ENST00000507955 NDST3O95803 873 aa14.47□□□□□ -0.09
DDX41-208ENST00000507955 CD160O95971 181 aa14.47□□□□□ -0.09
DDX41-208ENST00000507955 PIM1P11309 404 aaPredicted RBP14.47□□□□□ -0.09
DDX41-208ENST00000507955 ZNF37AP17032 561 aaPredicted RBP14.47□□□□□ -0.09
DDX41-208ENST00000507955 MRPS22P82650 360 aaKnown RBP14.47□□□□□ -0.09
DDX41-208ENST00000507955 GRM2Q14416 872 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms