RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 NRP1O14786 923 aa7.2□□□□□ -1.26
CLCN3-206ENST00000507875 PSTPIP1O43586 416 aa7.2□□□□□ -1.26
CLCN3-206ENST00000507875 NPHS1O60500 1241 aa7.2□□□□□ -1.26
CLCN3-206ENST00000507875 KCNJ13O60928 360 aa7.2□□□□□ -1.26
CLCN3-206ENST00000507875 GOSR1O95249 250 aa7.2□□□□□ -1.26
CLCN3-206ENST00000507875 HOXB4P17483 251 aaPredicted RBP7.2□□□□□ -1.26
CLCN3-206ENST00000507875 ADSLP30566 484 aaPredicted RBP7.2□□□□□ -1.26
CLCN3-206ENST00000507875 SDHAP31040 664 aa7.2□□□□□ -1.26
CLCN3-206ENST00000507875 IL12RB1P42701 662 aa7.2□□□□□ -1.26
CLCN3-206ENST00000507875 MAP2K3P46734 347 aa7.2□□□□□ -1.26
CLCN3-206ENST00000507875 OR1G1P47890 313 aa7.2□□□□□ -1.26
CLCN3-206ENST00000507875 PCBP3P57721 371 aaKnown RBP7.2□□□□□ -1.26
CLCN3-206ENST00000507875 YWHAHQ04917 246 aaPredicted RBP7.2□□□□□ -1.26
CLCN3-206ENST00000507875 MAMLD1Q13495 774 aa7.2□□□□□ -1.26
CLCN3-206ENST00000507875 PPP1R7Q15435 360 aa7.2□□□□□ -1.26
CLCN3-206ENST00000507875 STXBP5Q5T5C0 1151 aa7.2□□□□□ -1.26
CLCN3-206ENST00000507875 METTL11BQ5VVY1 283 aa7.2□□□□□ -1.26
CLCN3-206ENST00000507875 STEAP3Q658P3 488 aa7.2□□□□□ -1.26
CLCN3-206ENST00000507875 FAM129CQ86XR2 697 aa7.2□□□□□ -1.26
CLCN3-206ENST00000507875 GBP7Q8N8V2 638 aaPredicted RBP7.2□□□□□ -1.26
CLCN3-206ENST00000507875 EIF1ADQ8N9N8 165 aaKnown RBP7.2□□□□□ -1.26
CLCN3-206ENST00000507875 OR6C4Q8NGE1 309 aa7.2□□□□□ -1.26
CLCN3-206ENST00000507875 CCHCR1Q8TD31 782 aa7.2□□□□□ -1.26
CLCN3-206ENST00000507875 CASKIN2Q8WXE0 1202 aa7.2□□□□□ -1.26
CLCN3-206ENST00000507875 PKMYT1Q99640 499 aa7.2□□□□□ -1.26
CLCN3-206ENST00000507875 ZPBPQ9BS86 351 aa7.2□□□□□ -1.26
CLCN3-206ENST00000507875 HERC2P3Q9BVR0 1158 aa7.2□□□□□ -1.26
CLCN3-206ENST00000507875 ZCWPW1Q9H0M4 648 aa7.2□□□□□ -1.26
CLCN3-206ENST00000507875 CARD9Q9H257 536 aa7.2□□□□□ -1.26
CLCN3-206ENST00000507875 SYNCQ9H7C4 482 aa7.2□□□□□ -1.26
CLCN3-206ENST00000507875 HAUS2Q9NVX0 235 aa7.2□□□□□ -1.26
CLCN3-206ENST00000507875 TMEM160Q9NX00 188 aa7.2□□□□□ -1.26
CLCN3-206ENST00000507875 HMGXB4Q9UGU5 601 aa7.2□□□□□ -1.26
CLCN3-206ENST00000507875 AFF4Q9UHB7 1163 aaKnown RBP7.2□□□□□ -1.26
CLCN3-206ENST00000507875 NFU1Q9UMS0 254 aa7.2□□□□□ -1.26
CLCN3-206ENST00000507875 ALG6Q9Y672 507 aa7.2□□□□□ -1.26
CLCN3-206ENST00000507875 GREB1Q4ZG55 1949 aa7.2□□□□□ -1.26
CLCN3-206ENST00000507875 MYO16Q9Y6X6 1858 aa7.19□□□□□ -1.26
CLCN3-206ENST00000507875 RTN3O95197 1032 aaPredicted RBP7.19□□□□□ -1.26
CLCN3-206ENST00000507875 GALTP07902 379 aa7.19□□□□□ -1.26
CLCN3-206ENST00000507875 HNRNPA1P09651 372 aaKnown RBP eCLIP7.19□□□□□ -1.26
CLCN3-206ENST00000507875 CETN2P41208 172 aa7.19□□□□□ -1.26
CLCN3-206ENST00000507875 WDR5P61964 334 aaKnown RBP7.19□□□□□ -1.26
CLCN3-206ENST00000507875 MPP3Q13368 585 aa7.19□□□□□ -1.26
CLCN3-206ENST00000507875 ERV3-1Q14264 604 aa7.19□□□□□ -1.26
CLCN3-206ENST00000507875 PTK2BQ14289 1009 aa7.19□□□□□ -1.26
CLCN3-206ENST00000507875 NAA25Q14CX7 972 aa7.19□□□□□ -1.26
CLCN3-206ENST00000507875 ALS2CLQ60I27 953 aa7.19□□□□□ -1.26
CLCN3-206ENST00000507875 KIAA1841Q6NSI8 718 aa7.19□□□□□ -1.26
CLCN3-206ENST00000507875 VSTM1Q6UX27 236 aa7.19□□□□□ -1.26
CLCN3-206ENST00000507875 OTOP2Q7RTS6 562 aa7.19□□□□□ -1.26
CLCN3-206ENST00000507875 DEFB128Q7Z7B8 93 aa7.19□□□□□ -1.26
CLCN3-206ENST00000507875 XYLT1Q86Y38 959 aa7.19□□□□□ -1.26
CLCN3-206ENST00000507875 RNF168Q8IYW5 571 aaPredicted RBP7.19□□□□□ -1.26
CLCN3-206ENST00000507875 FAM181AQ8N9Y4 354 aa7.19□□□□□ -1.26
CLCN3-206ENST00000507875 MSLNLQ96KJ4 702 aa7.19□□□□□ -1.26
CLCN3-206ENST00000507875 SNX22Q96L94 193 aa7.19□□□□□ -1.26
CLCN3-206ENST00000507875 MRGPRX4Q96LA9 322 aa7.19□□□□□ -1.26
CLCN3-206ENST00000507875 C11orf70Q9BRQ4 267 aa7.19□□□□□ -1.26
CLCN3-206ENST00000507875 GPR62Q9BZJ7 368 aa7.19□□□□□ -1.26
CLCN3-206ENST00000507875 PLEKHA4Q9H4M7 779 aa7.19□□□□□ -1.26
CLCN3-206ENST00000507875 ACP6Q9NPH0 428 aa7.19□□□□□ -1.26
CLCN3-206ENST00000507875 PNPOQ9NVS9 261 aa7.19□□□□□ -1.26
CLCN3-206ENST00000507875 LPAR3Q9UBY5 353 aa7.19□□□□□ -1.26
CLCN3-206ENST00000507875 TRBV23OR9-2A0A075B6M9 112 aa7.19□□□□□ -1.26
CLCN3-206ENST00000507875 STMND1H3BQB6 276 aa7.19□□□□□ -1.26
CLCN3-206ENST00000507875 NDC80O14777 642 aa7.19□□□□□ -1.26
CLCN3-206ENST00000507875 VIMP08670 466 aaKnown RBP7.19□□□□□ -1.26
CLCN3-206ENST00000507875 SLC11A1P49279 550 aa7.19□□□□□ -1.26
CLCN3-206ENST00000507875 ALDH7A1P49419 539 aaKnown RBP7.19□□□□□ -1.26
CLCN3-206ENST00000507875 RPS6KA3P51812 740 aa7.19□□□□□ -1.26
CLCN3-206ENST00000507875 TRADDQ15628 312 aa7.19□□□□□ -1.26
CLCN3-206ENST00000507875 TCTN1Q2MV58 587 aa7.19□□□□□ -1.26
CLCN3-206ENST00000507875 TTC31Q49AM3 519 aaPredicted RBP7.19□□□□□ -1.26
CLCN3-206ENST00000507875 PTPN20Q4JDL3 420 aa7.19□□□□□ -1.26
CLCN3-206ENST00000507875 DCAF12L1Q5VU92 463 aa7.19□□□□□ -1.26
CLCN3-206ENST00000507875 ABRAXAS1Q6UWZ7 409 aa7.19□□□□□ -1.26
CLCN3-206ENST00000507875 SLC26A9Q7LBE3 791 aa7.19□□□□□ -1.26
CLCN3-206ENST00000507875 POLNQ7Z5Q5 900 aa7.19□□□□□ -1.26
CLCN3-206ENST00000507875 TTC7BQ86TV6 843 aa7.19□□□□□ -1.26
CLCN3-206ENST00000507875 HOOK3Q86VS8 718 aa7.19□□□□□ -1.26
CLCN3-206ENST00000507875 TSPYL5Q86VY4 417 aaPredicted RBP7.19□□□□□ -1.26
CLCN3-206ENST00000507875 ZNF280BQ86YH2 543 aa7.19□□□□□ -1.26
CLCN3-206ENST00000507875 FUKQ8N0W3 1084 aa7.19□□□□□ -1.26
CLCN3-206ENST00000507875 LZTR1Q8N653 840 aa7.19□□□□□ -1.26
CLCN3-206ENST00000507875 SPPL2BQ8TCT7 592 aa7.19□□□□□ -1.26
CLCN3-206ENST00000507875 ZNF558Q96NG5 402 aa7.19□□□□□ -1.26
CLCN3-206ENST00000507875 RUNDC3BQ96NL0 473 aa7.19□□□□□ -1.26
CLCN3-206ENST00000507875 DDX47Q9H0S4 455 aaKnown RBP7.19□□□□□ -1.26
CLCN3-206ENST00000507875 SLITRK6Q9H5Y7 841 aa7.19□□□□□ -1.26
CLCN3-206ENST00000507875 CWH43Q9H720 699 aa7.19□□□□□ -1.26
CLCN3-206ENST00000507875 VPS37BQ9H9H4 285 aa7.19□□□□□ -1.26
CLCN3-206ENST00000507875 SLC28A3Q9HAS3 691 aa7.19□□□□□ -1.26
CLCN3-206ENST00000507875 CNGB3Q9NQW8 809 aa7.19□□□□□ -1.26
CLCN3-206ENST00000507875 ANAPC7Q9UJX3 599 aa7.19□□□□□ -1.26
CLCN3-206ENST00000507875 PCDHGB4Q9UN71 923 aa7.19□□□□□ -1.26
CLCN3-206ENST00000507875 NME7Q9Y5B8 376 aa7.19□□□□□ -1.26
CLCN3-206ENST00000507875 GOLGA6L10A0A0M3HER8 536 aa7.18□□□□□ -1.26
CLCN3-206ENST00000507875 H0Y626 953 aa7.18□□□□□ -1.26
CLCN3-206ENST00000507875 H3BS24 57 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms