RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 MTRF1LQ9UGC7 380 aaKnown RBP20.05■□□□□ 0.8
USP53-203ENST00000507597 EIF2B4Q9UI10 523 aaKnown RBP20.05■□□□□ 0.8
USP53-203ENST00000507597 GMEB2Q9UKD1 530 aa20.05■□□□□ 0.8
USP53-203ENST00000507597 ZNF318Q5VUA4 2279 aa20.05■□□□□ 0.8
USP53-203ENST00000507597 A0A1B0GTW7 788 aa20.04■□□□□ 0.8
USP53-203ENST00000507597 TCRBV7S3A2A0A539 114 aa20.04■□□□□ 0.8
USP53-203ENST00000507597 GOLGA8MH3BSY2 632 aa20.04■□□□□ 0.8
USP53-203ENST00000507597 TSHRP16473 764 aa20.04■□□□□ 0.8
USP53-203ENST00000507597 PAMP19021 973 aa20.04■□□□□ 0.8
USP53-203ENST00000507597 NBL1P41271 181 aa20.04■□□□□ 0.8
USP53-203ENST00000507597 DCDC1P59894 354 aa20.04■□□□□ 0.8
USP53-203ENST00000507597 SLC7A5Q01650 507 aa20.04■□□□□ 0.8
USP53-203ENST00000507597 DPTQ07507 201 aa20.04■□□□□ 0.8
USP53-203ENST00000507597 OLIG2Q13516 323 aa20.04■□□□□ 0.8
USP53-203ENST00000507597 ANKRD22Q5VYY1 191 aa20.04■□□□□ 0.8
USP53-203ENST00000507597 PDPK2PQ6A1A2 396 aa20.04■□□□□ 0.8
USP53-203ENST00000507597 CASC4Q6P4E1 433 aa20.04■□□□□ 0.8
USP53-203ENST00000507597 Q6ZVL8 140 aa20.04■□□□□ 0.8
USP53-203ENST00000507597 ARMCX6Q7L4S7 300 aa20.04■□□□□ 0.8
USP53-203ENST00000507597 HSD11B1LQ7Z5J1 315 aa20.04■□□□□ 0.8
USP53-203ENST00000507597 TECPR1Q7Z6L1 1165 aa20.04■□□□□ 0.8
USP53-203ENST00000507597 IQCHQ86VS3 1027 aa20.04■□□□□ 0.8
USP53-203ENST00000507597 TTC30BQ8N4P2 665 aa20.04■□□□□ 0.8
USP53-203ENST00000507597 DTX3LQ8TDB6 740 aa20.04■□□□□ 0.8
USP53-203ENST00000507597 KLK6Q92876 244 aa20.04■□□□□ 0.8
USP53-203ENST00000507597 AP2M1Q96CW1 435 aa20.04■□□□□ 0.8
USP53-203ENST00000507597 MRM3Q9HC36 420 aaKnown RBP20.04■□□□□ 0.8
USP53-203ENST00000507597 EPB41L5Q9HCM4 733 aa20.04■□□□□ 0.8
USP53-203ENST00000507597 AASDHPPTQ9NRN7 309 aa20.04■□□□□ 0.8
USP53-203ENST00000507597 IL17CQ9P0M4 197 aa20.04■□□□□ 0.8
USP53-203ENST00000507597 NFKBIL1Q9UBC1 381 aaPredicted RBP20.04■□□□□ 0.8
USP53-203ENST00000507597 SMG5Q9UPR3 1016 aaKnown RBP20.04■□□□□ 0.8
USP53-203ENST00000507597 COQ6Q9Y2Z9 468 aa20.04■□□□□ 0.8
USP53-203ENST00000507597 SPO11Q9Y5K1 396 aa20.04■□□□□ 0.8
USP53-203ENST00000507597 C10orf142B7Z368 130 aa20.03■□□□□ 0.8
USP53-203ENST00000507597 BCAT2O15382 392 aaPredicted RBP20.03■□□□□ 0.8
USP53-203ENST00000507597 TMEM63AO94886 807 aa20.03■□□□□ 0.8
USP53-203ENST00000507597 C1SP09871 688 aa20.03■□□□□ 0.8
USP53-203ENST00000507597 SPAM1P38567 509 aa20.03■□□□□ 0.8
USP53-203ENST00000507597 ETV3P41162 512 aa20.03■□□□□ 0.8
USP53-203ENST00000507597 GRIA1P42261 906 aa20.03■□□□□ 0.8
USP53-203ENST00000507597 PTGER3P43115 390 aa20.03■□□□□ 0.8
USP53-203ENST00000507597 AFF3P51826 1226 aaKnown RBP20.03■□□□□ 0.8
USP53-203ENST00000507597 YPEL5P62699 121 aa20.03■□□□□ 0.8
USP53-203ENST00000507597 MRPS25P82663 173 aaKnown RBP20.03■□□□□ 0.8
USP53-203ENST00000507597 MTM1Q13496 603 aa20.03■□□□□ 0.8
USP53-203ENST00000507597 HIF1AQ16665 826 aa20.03■□□□□ 0.8
USP53-203ENST00000507597 CERCAMQ5T4B2 595 aa20.03■□□□□ 0.8
USP53-203ENST00000507597 CENPUQ71F23 418 aa20.03■□□□□ 0.8
USP53-203ENST00000507597 GPR161Q8N6U8 529 aaKnown RBP20.03■□□□□ 0.8
USP53-203ENST00000507597 GABPB2Q8TAK5 448 aaPredicted RBP20.03■□□□□ 0.8
USP53-203ENST00000507597 PIGKQ92643 395 aa20.03■□□□□ 0.8
USP53-203ENST00000507597 ZSCAN5AQ9BUG6 496 aa20.03■□□□□ 0.8
USP53-203ENST00000507597 TCAF1Q9Y4C2 921 aa20.03■□□□□ 0.8
USP53-203ENST00000507597 A6NNZ2 444 aa20.02■□□□□ 0.8
USP53-203ENST00000507597 EIF3HO15372 352 aaKnown RBP eCLIP20.02■□□□□ 0.8
USP53-203ENST00000507597 LMNAP02545 664 aaKnown RBP20.02■□□□□ 0.8
USP53-203ENST00000507597 RETP07949 1114 aa20.02■□□□□ 0.8
USP53-203ENST00000507597 MGAT1P26572 445 aa20.02■□□□□ 0.8
USP53-203ENST00000507597 TEAD1P28347 426 aa20.02■□□□□ 0.8
USP53-203ENST00000507597 CD38P28907 300 aa20.02■□□□□ 0.8
USP53-203ENST00000507597 GPR1P46091 355 aa20.02■□□□□ 0.8
USP53-203ENST00000507597 RABIFP47224 123 aa20.02■□□□□ 0.8
USP53-203ENST00000507597 PLTPP55058 493 aa20.02■□□□□ 0.8
USP53-203ENST00000507597 CUL1Q13616 776 aa20.02■□□□□ 0.8
USP53-203ENST00000507597 ITGA9Q13797 1035 aa20.02■□□□□ 0.8
USP53-203ENST00000507597 PTK2BQ14289 1009 aa20.02■□□□□ 0.8
USP53-203ENST00000507597 DUOXA1Q1HG43 343 aa20.02■□□□□ 0.8
USP53-203ENST00000507597 RAET1GQ6H3X3 334 aa20.02■□□□□ 0.8
USP53-203ENST00000507597 ESRP1Q6NXG1 681 aaKnown RBP20.02■□□□□ 0.8
USP53-203ENST00000507597 CAND1Q86VP6 1230 aaKnown RBP20.02■□□□□ 0.8
USP53-203ENST00000507597 MFSD2AQ8NA29 543 aa20.02■□□□□ 0.8
USP53-203ENST00000507597 OR4K2Q8NGD2 314 aa20.02■□□□□ 0.8
USP53-203ENST00000507597 SEC14L1Q92503 715 aa20.02■□□□□ 0.8
USP53-203ENST00000507597 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.02■□□□□ 0.8
USP53-203ENST00000507597 CENPTQ96BT3 561 aa20.02■□□□□ 0.8
USP53-203ENST00000507597 TTC1Q99614 292 aa20.02■□□□□ 0.8
USP53-203ENST00000507597 PHACTR1Q9C0D0 580 aa20.02■□□□□ 0.8
USP53-203ENST00000507597 NLE1Q9NVX2 485 aaPredicted RBP20.02■□□□□ 0.8
USP53-203ENST00000507597 ARL5AQ9Y689 179 aa20.02■□□□□ 0.8
USP53-203ENST00000507597 SLC30A1Q9Y6M5 507 aa20.02■□□□□ 0.8
USP53-203ENST00000507597 LDB2O43679 373 aa20.01■□□□□ 0.79
USP53-203ENST00000507597 EPN2O95208 641 aa20.01■□□□□ 0.79
USP53-203ENST00000507597 TTC4O95801 387 aa20.01■□□□□ 0.79
USP53-203ENST00000507597 KELP23276 732 aa20.01■□□□□ 0.79
USP53-203ENST00000507597 ITPKAP23677 461 aa20.01■□□□□ 0.79
USP53-203ENST00000507597 HTR1BP28222 390 aa20.01■□□□□ 0.79
USP53-203ENST00000507597 PPARGP37231 505 aaPredicted RBP20.01■□□□□ 0.79
USP53-203ENST00000507597 C21orf59P57076 290 aa20.01■□□□□ 0.79
USP53-203ENST00000507597 MSLNQ13421 630 aaPredicted RBP20.01■□□□□ 0.79
USP53-203ENST00000507597 PTPRRQ15256 657 aa20.01■□□□□ 0.79
USP53-203ENST00000507597 WSCD2Q2TBF2 565 aa20.01■□□□□ 0.79
USP53-203ENST00000507597 TEX35Q5T0J7 233 aa20.01■□□□□ 0.79
USP53-203ENST00000507597 PNCKQ6P2M8 343 aa20.01■□□□□ 0.79
USP53-203ENST00000507597 KYAT3Q6YP21 454 aaKnown RBP20.01■□□□□ 0.79
USP53-203ENST00000507597 ZCCHC9Q8N567 271 aaKnown RBP20.01■□□□□ 0.79
USP53-203ENST00000507597 TRAM1L1Q8N609 369 aa20.01■□□□□ 0.79
USP53-203ENST00000507597 TP53I13Q8NBR0 393 aaPredicted RBP20.01■□□□□ 0.79
USP53-203ENST00000507597 RUBCNQ92622 972 aa20.01■□□□□ 0.79
USP53-203ENST00000507597 ART4Q93070 314 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms