RNA–Protein interactions for RNA: ENST00000507533.1

DDR1-260, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-260ENST00000507533 SHC3Q92529 594 aa13.87□□□□□ -0.19
DDR1-260ENST00000507533 SLC38A3Q99624 504 aa13.87□□□□□ -0.19
DDR1-260ENST00000507533 RAB6CQ9H0N0 254 aa13.87□□□□□ -0.19
DDR1-260ENST00000507533 ZNF768Q9H5H4 540 aaKnown RBP13.87□□□□□ -0.19
DDR1-260ENST00000507533 PHPT1Q9NRX4 125 aaPredicted RBP13.87□□□□□ -0.19
DDR1-260ENST00000507533 CROTQ9UKG9 612 aa13.87□□□□□ -0.19
DDR1-260ENST00000507533 SUFUQ9UMX1 484 aa13.87□□□□□ -0.19
DDR1-260ENST00000507533 NEU3Q9UQ49 428 aa13.87□□□□□ -0.19
DDR1-260ENST00000507533 OAS3Q9Y6K5 1087 aaKnown RBP13.87□□□□□ -0.19
DDR1-260ENST00000507533 TRBV23OR9-2A0A075B6M9 112 aa13.86□□□□□ -0.19
DDR1-260ENST00000507533 WIPF3A6NGB9 483 aa13.86□□□□□ -0.19
DDR1-260ENST00000507533 TCP11X1B4DZS4 312 aa13.86□□□□□ -0.19
DDR1-260ENST00000507533 DNAJB5O75953 348 aa13.86□□□□□ -0.19
DDR1-260ENST00000507533 GNA14O95837 355 aa13.86□□□□□ -0.19
DDR1-260ENST00000507533 GM2AP17900 193 aa13.86□□□□□ -0.19
DDR1-260ENST00000507533 SLC9A1P19634 815 aa13.86□□□□□ -0.19
DDR1-260ENST00000507533 ADCY8P40145 1251 aa13.86□□□□□ -0.19
DDR1-260ENST00000507533 MARSP56192 900 aaKnown RBP13.86□□□□□ -0.19
DDR1-260ENST00000507533 STX17P56962 302 aa13.86□□□□□ -0.19
DDR1-260ENST00000507533 ACOX1Q15067 660 aa13.86□□□□□ -0.19
DDR1-260ENST00000507533 AFMIDQ63HM1 303 aa13.86□□□□□ -0.19
DDR1-260ENST00000507533 WDR74Q6RFH5 385 aaPredicted RBP13.86□□□□□ -0.19
DDR1-260ENST00000507533 PHLDB2Q86SQ0 1253 aa13.86□□□□□ -0.19
DDR1-260ENST00000507533 SLC47A2Q86VL8 602 aa13.86□□□□□ -0.19
DDR1-260ENST00000507533 TMEM35BQ8NCS4 154 aa13.86□□□□□ -0.19
DDR1-260ENST00000507533 PTCD2Q8WV60 388 aaKnown RBP13.86□□□□□ -0.19
DDR1-260ENST00000507533 RNF31Q96EP0 1072 aa13.86□□□□□ -0.19
DDR1-260ENST00000507533 FRMD8Q9BZ67 464 aaPredicted RBP13.86□□□□□ -0.19
DDR1-260ENST00000507533 PDCL3Q9H2J4 239 aa13.86□□□□□ -0.19
DDR1-260ENST00000507533 NOL6Q9H6R4 1146 aaKnown RBP13.86□□□□□ -0.19
DDR1-260ENST00000507533 DONSONQ9NYP3 566 aa13.86□□□□□ -0.19
DDR1-260ENST00000507533 TMEM63CQ9P1W3 806 aa13.86□□□□□ -0.19
DDR1-260ENST00000507533 RWDD2AQ9UIY3 292 aa13.86□□□□□ -0.19
DDR1-260ENST00000507533 TMEM59LQ9UK28 342 aa13.86□□□□□ -0.19
DDR1-260ENST00000507533 OTOGQ6ZRI0 2925 aa13.86□□□□□ -0.19
DDR1-260ENST00000507533 A8MX80 341 aa13.85□□□□□ -0.19
DDR1-260ENST00000507533 SORBS2O94875 1100 aaKnown RBP13.85□□□□□ -0.19
DDR1-260ENST00000507533 PLEKP08567 350 aaPredicted RBP13.85□□□□□ -0.19
DDR1-260ENST00000507533 ERCC5P28715 1186 aaPredicted RBP13.85□□□□□ -0.19
DDR1-260ENST00000507533 CLCN1P35523 988 aa13.85□□□□□ -0.19
DDR1-260ENST00000507533 ACTR1BP42025 376 aa13.85□□□□□ -0.19
DDR1-260ENST00000507533 POLD2P49005 469 aa13.85□□□□□ -0.19
DDR1-260ENST00000507533 ACTR1AP61163 376 aa13.85□□□□□ -0.19
DDR1-260ENST00000507533 INPP5JQ15735 1006 aaPredicted RBP13.85□□□□□ -0.19
DDR1-260ENST00000507533 CDO1Q16878 200 aa13.85□□□□□ -0.19
DDR1-260ENST00000507533 DPCR1Q3MIW9 517 aa13.85□□□□□ -0.19
DDR1-260ENST00000507533 C2CD6Q53TS8 623 aa13.85□□□□□ -0.19
DDR1-260ENST00000507533 C6orf15Q6UXA7 325 aaPredicted RBP13.85□□□□□ -0.19
DDR1-260ENST00000507533 DPPA4Q7L190 304 aa13.85□□□□□ -0.19
DDR1-260ENST00000507533 APLFQ8IW19 511 aaPredicted RBP13.85□□□□□ -0.19
DDR1-260ENST00000507533 NCSTNQ92542 709 aa13.85□□□□□ -0.19
DDR1-260ENST00000507533 TCTN2Q96GX1 697 aa13.85□□□□□ -0.19
DDR1-260ENST00000507533 TUBGCP5Q96RT8 1024 aa13.85□□□□□ -0.19
DDR1-260ENST00000507533 TEX101Q9BY14 249 aa13.85□□□□□ -0.19
DDR1-260ENST00000507533 ULBP3Q9BZM4 244 aa13.85□□□□□ -0.19
DDR1-260ENST00000507533 TWSG1Q9GZX9 223 aa13.85□□□□□ -0.19
DDR1-260ENST00000507533 UBA2Q9UBT2 640 aaPredicted RBP13.85□□□□□ -0.19
DDR1-260ENST00000507533 APEX2Q9UBZ4 518 aa13.85□□□□□ -0.19
DDR1-260ENST00000507533 ERRFI1Q9UJM3 462 aaPredicted RBP13.85□□□□□ -0.19
DDR1-260ENST00000507533 PLEKHM1Q9Y4G2 1056 aa13.85□□□□□ -0.19
DDR1-260ENST00000507533 ANKRD36A6QL64 1941 aa13.85□□□□□ -0.19
DDR1-260ENST00000507533 ARHGEF17Q96PE2 2063 aaPredicted RBP13.84□□□□□ -0.19
DDR1-260ENST00000507533 PIPSLA2A3N6 862 aa13.84□□□□□ -0.19
DDR1-260ENST00000507533 RASA4BC9J798 803 aa13.84□□□□□ -0.19
DDR1-260ENST00000507533 RASA4O43374 803 aa13.84□□□□□ -0.19
DDR1-260ENST00000507533 FGFR1OPO95684 399 aaKnown RBP13.84□□□□□ -0.19
DDR1-260ENST00000507533 LDLRP01130 860 aa13.84□□□□□ -0.19
DDR1-260ENST00000507533 ZNF28P17035 718 aa13.84□□□□□ -0.19
DDR1-260ENST00000507533 SERPINA4P29622 427 aa13.84□□□□□ -0.19
DDR1-260ENST00000507533 CDH5P33151 784 aaPredicted RBP13.84□□□□□ -0.19
DDR1-260ENST00000507533 FASLGP48023 281 aa13.84□□□□□ -0.19
DDR1-260ENST00000507533 PGDP52209 483 aa13.84□□□□□ -0.19
DDR1-260ENST00000507533 SEMA5AQ13591 1074 aa13.84□□□□□ -0.19
DDR1-260ENST00000507533 C15orf59Q2T9L4 293 aaPredicted RBP13.84□□□□□ -0.19
DDR1-260ENST00000507533 CT47A1Q5JQC4 288 aaPredicted RBP13.84□□□□□ -0.19
DDR1-260ENST00000507533 CAVIN1Q6NZI2 390 aaKnown RBP13.84□□□□□ -0.19
DDR1-260ENST00000507533 SASS6Q6UVJ0 657 aa13.84□□□□□ -0.19
DDR1-260ENST00000507533 EMC1Q8N766 993 aa13.84□□□□□ -0.19
DDR1-260ENST00000507533 PAF1Q8N7H5 531 aa13.84□□□□□ -0.19
DDR1-260ENST00000507533 GALNT6Q8NCL4 622 aa13.84□□□□□ -0.19
DDR1-260ENST00000507533 NUS1Q96E22 293 aa13.84□□□□□ -0.19
DDR1-260ENST00000507533 TRIM55Q9BYV6 548 aa13.84□□□□□ -0.19
DDR1-260ENST00000507533 SLC29A3Q9BZD2 475 aa13.84□□□□□ -0.19
DDR1-260ENST00000507533 ATP13A3Q9H7F0 1226 aa13.84□□□□□ -0.19
DDR1-260ENST00000507533 KLHL3Q9UH77 587 aa13.84□□□□□ -0.19
DDR1-260ENST00000507533 KCND3Q9UK17 655 aa13.84□□□□□ -0.19
DDR1-260ENST00000507533 PRRC2CQ9Y520 2896 aaKnown RBP13.84□□□□□ -0.19
DDR1-260ENST00000507533 C2CD3Q4AC94 2353 aa13.83□□□□□ -0.19
DDR1-260ENST00000507533 FOXN3O00409 490 aaPredicted RBP13.83□□□□□ -0.2
DDR1-260ENST00000507533 CREG1O75629 220 aa13.83□□□□□ -0.2
DDR1-260ENST00000507533 IVLP07476 585 aa13.83□□□□□ -0.2
DDR1-260ENST00000507533 PNMA6AP0CW24 399 aaPredicted RBP13.83□□□□□ -0.2
DDR1-260ENST00000507533 YBEYP58557 167 aaPredicted RBP13.83□□□□□ -0.2
DDR1-260ENST00000507533 POLR2LP62875 67 aaKnown RBP13.83□□□□□ -0.2
DDR1-260ENST00000507533 FOXM1Q08050 763 aa13.83□□□□□ -0.2
DDR1-260ENST00000507533 PRR30Q53SZ7 412 aaPredicted RBP13.83□□□□□ -0.2
DDR1-260ENST00000507533 GBP6Q6ZN66 633 aa13.83□□□□□ -0.2
DDR1-260ENST00000507533 ARCQ7LC44 396 aa13.83□□□□□ -0.2
DDR1-260ENST00000507533 LYSMD3Q7Z3D4 306 aa13.83□□□□□ -0.2
DDR1-260ENST00000507533 SRLQ86TD4 932 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms