RNA–Protein interactions for RNA: ENST00000507469.5

SMG7-212, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMG7, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-212ENST00000507469 MEIS3P2A8K0S8 358 aa11.74□□□□□ -0.53
SMG7-212ENST00000507469 C9IYK1 514 aa11.74□□□□□ -0.53
SMG7-212ENST00000507469 GJA9P57773 515 aa11.74□□□□□ -0.53
SMG7-212ENST00000507469 CLCQ05315 142 aa11.74□□□□□ -0.53
SMG7-212ENST00000507469 DCTN2Q13561 401 aaKnown RBP11.74□□□□□ -0.53
SMG7-212ENST00000507469 TXNDC11Q6PKC3 985 aa11.74□□□□□ -0.53
SMG7-212ENST00000507469 CEP97Q8IW35 865 aa11.74□□□□□ -0.53
SMG7-212ENST00000507469 STK40Q8N2I9 435 aa11.74□□□□□ -0.53
SMG7-212ENST00000507469 LINGO1Q96FE5 620 aa11.74□□□□□ -0.53
SMG7-212ENST00000507469 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.74□□□□□ -0.531e-6■■■■□ 22.5
SMG7-212ENST00000507469 STARD7Q9NQZ5 370 aa11.74□□□□□ -0.53
SMG7-212ENST00000507469 AGO1Q9UL18 857 aaKnown RBP11.74□□□□□ -0.53
SMG7-212ENST00000507469 PCDHB8Q9UN66 801 aa11.74□□□□□ -0.53
SMG7-212ENST00000507469 SH3BP1Q9Y3L3 701 aa11.74□□□□□ -0.53
SMG7-212ENST00000507469 FOCADQ5VW36 1801 aa11.73□□□□□ -0.53
SMG7-212ENST00000507469 NPEPPSL1A6NEC2 478 aa11.73□□□□□ -0.53
SMG7-212ENST00000507469 SEC22BO75396 215 aa11.73□□□□□ -0.53
SMG7-212ENST00000507469 CDH2P19022 906 aaPredicted RBP11.73□□□□□ -0.53
SMG7-212ENST00000507469 ROPN1LQ96C74 230 aa11.73□□□□□ -0.53
SMG7-212ENST00000507469 PIDD1Q9HB75 910 aa11.73□□□□□ -0.53
SMG7-212ENST00000507469 WDR6Q9NNW5 1121 aaKnown RBP11.73□□□□□ -0.53
SMG7-212ENST00000507469 TLR6Q9Y2C9 796 aa11.73□□□□□ -0.53
SMG7-212ENST00000507469 FAM149AA5PLN7 773 aa11.73□□□□□ -0.53
SMG7-212ENST00000507469 TBKBP1A7MCY6 615 aa11.73□□□□□ -0.53
SMG7-212ENST00000507469 GABRDO14764 452 aa11.73□□□□□ -0.53
SMG7-212ENST00000507469 BCAS2O75934 225 aaPredicted RBP11.73□□□□□ -0.53
SMG7-212ENST00000507469 TBX18O95935 607 aa11.73□□□□□ -0.53
SMG7-212ENST00000507469 ASGR1P07306 291 aa11.73□□□□□ -0.53
SMG7-212ENST00000507469 NAA20P61599 178 aa11.73□□□□□ -0.53
SMG7-212ENST00000507469 PURAQ00577 322 aaKnown RBP11.73□□□□□ -0.53
SMG7-212ENST00000507469 IL10RBQ08334 325 aa11.73□□□□□ -0.53
SMG7-212ENST00000507469 LCP2Q13094 533 aa11.73□□□□□ -0.53
SMG7-212ENST00000507469 FAM117BQ6P1L5 589 aa11.73□□□□□ -0.53
SMG7-212ENST00000507469 VPS33AQ96AX1 596 aa11.73□□□□□ -0.53
SMG7-212ENST00000507469 FAM120BQ96EK7 910 aaKnown RBP11.73□□□□□ -0.53
SMG7-212ENST00000507469 GPR21Q99679 349 aa11.73□□□□□ -0.53
SMG7-212ENST00000507469 PARVBQ9HBI1 364 aa11.73□□□□□ -0.53
SMG7-212ENST00000507469 GTF2IRD1Q9UHL9 959 aa11.73□□□□□ -0.53
SMG7-212ENST00000507469 ARL5AQ9Y689 179 aa11.73□□□□□ -0.53
SMG7-212ENST00000507469 HMX2A2RU54 273 aa11.73□□□□□ -0.53
SMG7-212ENST00000507469 HOXA2O43364 376 aa11.73□□□□□ -0.53
SMG7-212ENST00000507469 MC4RP32245 332 aa11.73□□□□□ -0.53
SMG7-212ENST00000507469 HERVK_113P63132 956 aa11.73□□□□□ -0.53
SMG7-212ENST00000507469 UBXN11Q5T124 520 aa11.73□□□□□ -0.53
SMG7-212ENST00000507469 ELMOD1Q8N336 334 aa11.73□□□□□ -0.53
SMG7-212ENST00000507469 ZNF276Q8N554 614 aa11.73□□□□□ -0.53
SMG7-212ENST00000507469 CPSF7Q8N684 471 aaKnown RBP11.73□□□□□ -0.53
SMG7-212ENST00000507469 ERVK-6Q9BXR3 956 aa11.73□□□□□ -0.53
SMG7-212ENST00000507469 SENP6Q9GZR1 1112 aaPredicted RBP11.73□□□□□ -0.53
SMG7-212ENST00000507469 SCAMP3O14828 347 aaKnown RBP11.72□□□□□ -0.53
SMG7-212ENST00000507469 SIX3O95343 332 aaPredicted RBP11.72□□□□□ -0.53
SMG7-212ENST00000507469 TUFMP49411 452 aaKnown RBP11.72□□□□□ -0.53
SMG7-212ENST00000507469 TNK2Q07912 1038 aa11.72□□□□□ -0.53
SMG7-212ENST00000507469 DUSP4Q13115 394 aa11.72□□□□□ -0.53
SMG7-212ENST00000507469 MAD2L1Q13257 205 aaPredicted RBP11.72□□□□□ -0.53
SMG7-212ENST00000507469 C16orf72Q14CZ0 275 aa11.72□□□□□ -0.53
SMG7-212ENST00000507469 PGS1Q32NB8 556 aa11.72□□□□□ -0.53
SMG7-212ENST00000507469 HECTD3Q5T447 861 aa11.72□□□□□ -0.53
SMG7-212ENST00000507469 ACBD5Q5T8D3 534 aaPredicted RBP11.72□□□□□ -0.53
SMG7-212ENST00000507469 GDF6Q6KF10 455 aaPredicted RBP11.72□□□□□ -0.53
SMG7-212ENST00000507469 ZDHHC13Q8IUH4 622 aa11.72□□□□□ -0.53
SMG7-212ENST00000507469 HS6ST3Q8IZP7 471 aa11.72□□□□□ -0.53
SMG7-212ENST00000507469 CBR4Q8N4T8 237 aa11.72□□□□□ -0.53
SMG7-212ENST00000507469 TERB1Q8NA31 727 aa11.72□□□□□ -0.53
SMG7-212ENST00000507469 BRSK1Q8TDC3 778 aa11.72□□□□□ -0.53
SMG7-212ENST00000507469 SLC39A3Q9BRY0 314 aa11.72□□□□□ -0.53
SMG7-212ENST00000507469 MFSD1Q9H3U5 465 aa11.72□□□□□ -0.53
SMG7-212ENST00000507469 RMND5AQ9H871 391 aa11.72□□□□□ -0.53
SMG7-212ENST00000507469 COL11A2P13942 1736 aaPredicted RBP11.72□□□□□ -0.53
SMG7-212ENST00000507469 OR6C75A6NL08 312 aa11.72□□□□□ -0.53
SMG7-212ENST00000507469 DNAJA2O60884 412 aa11.72□□□□□ -0.53
SMG7-212ENST00000507469 TACR2P21452 398 aa11.72□□□□□ -0.53
SMG7-212ENST00000507469 NNMTP40261 264 aa11.72□□□□□ -0.53
SMG7-212ENST00000507469 RPL26P61254 145 aaKnown RBP11.72□□□□□ -0.53
SMG7-212ENST00000507469 VAC14Q08AM6 782 aa11.72□□□□□ -0.53
SMG7-212ENST00000507469 ZIK1Q3SY52 487 aaPredicted RBP11.72□□□□□ -0.53
SMG7-212ENST00000507469 SIRPB2Q5JXA9 342 aa11.72□□□□□ -0.53
SMG7-212ENST00000507469 ARMC12Q5T9G4 340 aa11.72□□□□□ -0.53
SMG7-212ENST00000507469 ABRAXAS1Q6UWZ7 409 aa11.72□□□□□ -0.53
SMG7-212ENST00000507469 LRRC8DQ7L1W4 858 aa11.72□□□□□ -0.53
SMG7-212ENST00000507469 PIM3Q86V86 326 aa11.72□□□□□ -0.53
SMG7-212ENST00000507469 OR9I1Q8NGQ6 314 aa11.72□□□□□ -0.53
SMG7-212ENST00000507469 SEPT8Q92599 483 aa11.72□□□□□ -0.53
SMG7-212ENST00000507469 PAAF1Q9BRP4 392 aa11.72□□□□□ -0.53
SMG7-212ENST00000507469 TBCDQ9BTW9 1192 aa11.72□□□□□ -0.53
SMG7-212ENST00000507469 UGT2B28Q9BY64 529 aa11.72□□□□□ -0.53
SMG7-212ENST00000507469 ELOVL6Q9H5J4 265 aa11.72□□□□□ -0.53
SMG7-212ENST00000507469 PCDHGB4Q9UN71 923 aa11.72□□□□□ -0.53
SMG7-212ENST00000507469 CCDC162PA2VCL2 907 aa11.72□□□□□ -0.53
SMG7-212ENST00000507469 ZNF197O14709 1029 aa11.72□□□□□ -0.53
SMG7-212ENST00000507469 KRT6AP02538 564 aa11.72□□□□□ -0.53
SMG7-212ENST00000507469 KRT6BP04259 564 aa11.72□□□□□ -0.53
SMG7-212ENST00000507469 PKMP14618 531 aaKnown RBP11.72□□□□□ -0.53
SMG7-212ENST00000507469 SLC7A1P30825 629 aa11.72□□□□□ -0.53
SMG7-212ENST00000507469 KRT6CP48668 564 aa11.72□□□□□ -0.53
SMG7-212ENST00000507469 TRAP1Q12931 704 aaKnown RBP11.72□□□□□ -0.53
SMG7-212ENST00000507469 TRIP4Q15650 581 aaPredicted RBP11.72□□□□□ -0.53
SMG7-212ENST00000507469 RETSATQ6NUM9 610 aa11.72□□□□□ -0.53
SMG7-212ENST00000507469 SPATA19Q7Z5L4 167 aa11.72□□□□□ -0.53
SMG7-212ENST00000507469 KBTBD2Q8IY47 623 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms