RNA–Protein interactions for RNA: ENST00000507009.5

GYPB-208, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 388 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-208ENST00000507009 FNIP1Q8TF40 1166 aa5.77□□□□□ -1.49
GYPB-208ENST00000507009 FAM172AQ8WUF8 416 aa5.77□□□□□ -1.49
GYPB-208ENST00000507009 PDCD6IPQ8WUM4 868 aaKnown RBP5.77□□□□□ -1.49
GYPB-208ENST00000507009 SLC20A1Q8WUM9 679 aa5.77□□□□□ -1.49
GYPB-208ENST00000507009 APOBEC4Q8WW27 367 aaKnown RBP5.77□□□□□ -1.49
GYPB-208ENST00000507009 VOPP1Q96AW1 172 aa5.77□□□□□ -1.49
GYPB-208ENST00000507009 CELF6Q96J87 481 aaKnown RBP5.77□□□□□ -1.49
GYPB-208ENST00000507009 CATSPER2Q96P56 530 aa5.77□□□□□ -1.49
GYPB-208ENST00000507009 C11orf70Q9BRQ4 267 aa5.77□□□□□ -1.49
GYPB-208ENST00000507009 GSDMCQ9BYG8 508 aa5.77□□□□□ -1.49
GYPB-208ENST00000507009 KCNK4Q9NYG8 393 aa5.77□□□□□ -1.49
GYPB-208ENST00000507009 TAAR2Q9P1P5 351 aa5.77□□□□□ -1.49
GYPB-208ENST00000507009 DKK3Q9UBP4 350 aa5.77□□□□□ -1.49
GYPB-208ENST00000507009 TMEM59LQ9UK28 342 aa5.77□□□□□ -1.49
GYPB-208ENST00000507009 PLEKHM1Q9Y4G2 1056 aa5.77□□□□□ -1.49
GYPB-208ENST00000507009 FHOD1Q9Y613 1164 aa5.77□□□□□ -1.49
GYPB-208ENST00000507009 MRPS18BQ9Y676 258 aaKnown RBP5.77□□□□□ -1.49
GYPB-208ENST00000507009 DGKBQ9Y6T7 804 aa5.77□□□□□ -1.49
GYPB-208ENST00000507009 ARHGEF17Q96PE2 2063 aaPredicted RBP5.76□□□□□ -1.49
GYPB-208ENST00000507009 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.76□□□□□ -1.49
GYPB-208ENST00000507009 HGSO14964 777 aaPredicted RBP5.76□□□□□ -1.49
GYPB-208ENST00000507009 PPM1DO15297 605 aa5.76□□□□□ -1.49
GYPB-208ENST00000507009 VPS4BO75351 444 aa5.76□□□□□ -1.49
GYPB-208ENST00000507009 KATNA1O75449 491 aa5.76□□□□□ -1.49
GYPB-208ENST00000507009 GFPT2O94808 682 aa5.76□□□□□ -1.49
GYPB-208ENST00000507009 MAP3K6O95382 1288 aa5.76□□□□□ -1.49
GYPB-208ENST00000507009 TCN2P20062 427 aa5.76□□□□□ -1.49
GYPB-208ENST00000507009 GNLYP22749 145 aa5.76□□□□□ -1.49
GYPB-208ENST00000507009 SERPINA4P29622 427 aa5.76□□□□□ -1.49
GYPB-208ENST00000507009 SCNN1AP37088 669 aa5.76□□□□□ -1.49
GYPB-208ENST00000507009 ACTR1BP42025 376 aa5.76□□□□□ -1.49
GYPB-208ENST00000507009 POLD2P49005 469 aa5.76□□□□□ -1.49
GYPB-208ENST00000507009 SUOXP51687 545 aa5.76□□□□□ -1.49
GYPB-208ENST00000507009 HDAC4P56524 1084 aa5.76□□□□□ -1.49
GYPB-208ENST00000507009 ACTR1AP61163 376 aa5.76□□□□□ -1.49
GYPB-208ENST00000507009 NOMO3P69849 1222 aa5.76□□□□□ -1.49
GYPB-208ENST00000507009 CTBSQ01459 385 aa5.76□□□□□ -1.49
GYPB-208ENST00000507009 BCL2L1Q07817 233 aa5.76□□□□□ -1.49
GYPB-208ENST00000507009 RALGDSQ12967 914 aa5.76□□□□□ -1.49
GYPB-208ENST00000507009 NFATC2Q13469 925 aa5.76□□□□□ -1.49
GYPB-208ENST00000507009 SERINC3Q13530 473 aa5.76□□□□□ -1.49
GYPB-208ENST00000507009 INO80DQ53TQ3 878 aaPredicted RBP5.76□□□□□ -1.49
GYPB-208ENST00000507009 RAET1GQ6H3X3 334 aa5.76□□□□□ -1.49
GYPB-208ENST00000507009 PNCKQ6P2M8 343 aa5.76□□□□□ -1.49
GYPB-208ENST00000507009 BRAT1Q6PJG6 821 aa5.76□□□□□ -1.49
GYPB-208ENST00000507009 LIPIQ6XZB0 460 aa5.76□□□□□ -1.49
GYPB-208ENST00000507009 SLFN11Q7Z7L1 901 aa5.76□□□□□ -1.49
GYPB-208ENST00000507009 SRLQ86TD4 932 aa5.76□□□□□ -1.49
GYPB-208ENST00000507009 HEATR4Q86WZ0 1026 aa5.76□□□□□ -1.49
GYPB-208ENST00000507009 NRROSQ86YC3 692 aa5.76□□□□□ -1.49
GYPB-208ENST00000507009 FAM71AQ8IYT1 594 aa5.76□□□□□ -1.49
GYPB-208ENST00000507009 NLGN4XQ8N0W4 816 aa5.76□□□□□ -1.49
GYPB-208ENST00000507009 RTL3Q8N8U3 475 aaKnown RBP5.76□□□□□ -1.49
GYPB-208ENST00000507009 TSEN2Q8NCE0 465 aaKnown RBP5.76□□□□□ -1.49
GYPB-208ENST00000507009 NLGN4YQ8NFZ3 816 aaPredicted RBP5.76□□□□□ -1.49
GYPB-208ENST00000507009 GPBAR1Q8TDU6 330 aa5.76□□□□□ -1.49
GYPB-208ENST00000507009 CASKIN2Q8WXE0 1202 aa5.76□□□□□ -1.49
GYPB-208ENST00000507009 STARD8Q92502 1023 aa5.76□□□□□ -1.49
GYPB-208ENST00000507009 NCSTNQ92542 709 aa5.76□□□□□ -1.49
GYPB-208ENST00000507009 NUS1Q96E22 293 aa5.76□□□□□ -1.49
GYPB-208ENST00000507009 TIGD1Q96MW7 591 aa5.76□□□□□ -1.49
GYPB-208ENST00000507009 PSMG3-AS1Q96PY0 264 aa5.76□□□□□ -1.49
GYPB-208ENST00000507009 SLC38A3Q99624 504 aa5.76□□□□□ -1.49
GYPB-208ENST00000507009 SELENOOQ9BVL4 669 aa5.76□□□□□ -1.49
GYPB-208ENST00000507009 CINPQ9BW66 212 aaPredicted RBP5.76□□□□□ -1.49
GYPB-208ENST00000507009 CDH19Q9H159 772 aa5.76□□□□□ -1.49
GYPB-208ENST00000507009 NOL6Q9H6R4 1146 aaKnown RBP5.76□□□□□ -1.49
GYPB-208ENST00000507009 ATP13A3Q9H7F0 1226 aa5.76□□□□□ -1.49
GYPB-208ENST00000507009 APMAPQ9HDC9 416 aa5.76□□□□□ -1.49
GYPB-208ENST00000507009 PHPT1Q9NRX4 125 aaPredicted RBP5.76□□□□□ -1.49
GYPB-208ENST00000507009 SEPT11Q9NVA2 429 aaKnown RBP5.76□□□□□ -1.49
GYPB-208ENST00000507009 GPATCH2LQ9NWQ4 482 aa5.76□□□□□ -1.49
GYPB-208ENST00000507009 PLEKHB1Q9UF11 243 aaPredicted RBP5.76□□□□□ -1.49
GYPB-208ENST00000507009 TUBD1Q9UJT1 453 aa5.76□□□□□ -1.49
GYPB-208ENST00000507009 SUFUQ9UMX1 484 aa5.76□□□□□ -1.49
GYPB-208ENST00000507009 VPS4AQ9UN37 437 aa5.76□□□□□ -1.49
GYPB-208ENST00000507009 NEU3Q9UQ49 428 aa5.76□□□□□ -1.49
GYPB-208ENST00000507009 MFHAS1Q9Y4C4 1052 aa5.76□□□□□ -1.49
GYPB-208ENST00000507009 BSNQ9UPA5 3926 aa5.76□□□□□ -1.49
GYPB-208ENST00000507009 LRRK2Q5S007 2527 aa5.75□□□□□ -1.49
GYPB-208ENST00000507009 IGHV1OR21-1A0A087WYE8 117 aa5.75□□□□□ -1.49
GYPB-208ENST00000507009 A0A0U1RQS6 177 aa5.75□□□□□ -1.49
GYPB-208ENST00000507009 MKRN2OSH3BPM6 223 aa5.75□□□□□ -1.49
GYPB-208ENST00000507009 K7EM74 188 aa5.75□□□□□ -1.49
GYPB-208ENST00000507009 DFFAO00273 331 aa5.75□□□□□ -1.49
GYPB-208ENST00000507009 PDE2AO00408 941 aaPredicted RBP5.75□□□□□ -1.49
GYPB-208ENST00000507009 TNFRSF10CO14798 259 aa5.75□□□□□ -1.49
GYPB-208ENST00000507009 DAPK3O43293 454 aa5.75□□□□□ -1.49
GYPB-208ENST00000507009 CCP110O43303 1012 aa5.75□□□□□ -1.49
GYPB-208ENST00000507009 SNX2O60749 519 aa5.75□□□□□ -1.49
GYPB-208ENST00000507009 PALMO75781 387 aa5.75□□□□□ -1.49
GYPB-208ENST00000507009 STK17BO94768 372 aa5.75□□□□□ -1.49
GYPB-208ENST00000507009 LSM8O95777 96 aaKnown RBP5.75□□□□□ -1.49
GYPB-208ENST00000507009 FUCA1P04066 466 aa5.75□□□□□ -1.49
GYPB-208ENST00000507009 VSIG8P0DPA2 414 aa5.75□□□□□ -1.49
GYPB-208ENST00000507009 THRAP10827 490 aa5.75□□□□□ -1.49
GYPB-208ENST00000507009 KRT3P12035 628 aa5.75□□□□□ -1.49
GYPB-208ENST00000507009 MYCLP1P12525 358 aaPredicted RBP5.75□□□□□ -1.49
GYPB-208ENST00000507009 GPD1P21695 349 aa5.75□□□□□ -1.49
GYPB-208ENST00000507009 CDH5P33151 784 aaPredicted RBP5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms