RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 TXNRD3NBQ6F5E7 133 aa14.41□□□□□ -0.1
HMGCS1-203ENST00000507004 RAET1GQ6H3X3 334 aa14.41□□□□□ -0.1
HMGCS1-203ENST00000507004 CRTC1Q6UUV9 634 aa14.41□□□□□ -0.1
HMGCS1-203ENST00000507004 CCNJLQ8IV13 435 aa14.41□□□□□ -0.1
HMGCS1-203ENST00000507004 NRSN1Q8IZ57 195 aa14.41□□□□□ -0.1
HMGCS1-203ENST00000507004 FBXO39Q8N4B4 442 aa14.41□□□□□ -0.1
HMGCS1-203ENST00000507004 GPBAR1Q8TDU6 330 aa14.41□□□□□ -0.1
HMGCS1-203ENST00000507004 PIH1D2Q8WWB5 315 aa14.41□□□□□ -0.1
HMGCS1-203ENST00000507004 FAF2Q96CS3 445 aa14.41□□□□□ -0.1
HMGCS1-203ENST00000507004 HDAC11Q96DB2 347 aa14.41□□□□□ -0.1
HMGCS1-203ENST00000507004 BTBD6Q96KE9 485 aa14.41□□□□□ -0.1
HMGCS1-203ENST00000507004 B3GNT4Q9C0J1 378 aa14.41□□□□□ -0.1
HMGCS1-203ENST00000507004 TMEM168Q9H0V1 697 aa14.41□□□□□ -0.1
HMGCS1-203ENST00000507004 CDH19Q9H159 772 aa14.41□□□□□ -0.1
HMGCS1-203ENST00000507004 CARS2Q9HA77 564 aaKnown RBP14.41□□□□□ -0.1
HMGCS1-203ENST00000507004 RBM22Q9NW64 420 aaKnown RBP eCLIP14.41□□□□□ -0.14e-23■■■■□ 23.4
HMGCS1-203ENST00000507004 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.41□□□□□ -0.1
HMGCS1-203ENST00000507004 NENFQ9UMX5 172 aa14.41□□□□□ -0.1
HMGCS1-203ENST00000507004 LRP4O75096 1905 aa14.41□□□□□ -0.1
HMGCS1-203ENST00000507004 A0A0J9YYE9 177 aa14.4□□□□□ -0.1
HMGCS1-203ENST00000507004 RGSL1A5PLK6 1076 aa14.4□□□□□ -0.1
HMGCS1-203ENST00000507004 A8MX80 341 aa14.4□□□□□ -0.1
HMGCS1-203ENST00000507004 ERVH48-1M5A8F1 160 aa14.4□□□□□ -0.1
HMGCS1-203ENST00000507004 KLK10O43240 276 aa14.4□□□□□ -0.1
HMGCS1-203ENST00000507004 AKR1B10O60218 316 aa14.4□□□□□ -0.1
HMGCS1-203ENST00000507004 NOBOXO60393 691 aa14.4□□□□□ -0.1
HMGCS1-203ENST00000507004 TNFSF15O95150 251 aa14.4□□□□□ -0.1
HMGCS1-203ENST00000507004 TRBC1P01850 177 aa14.4□□□□□ -0.1
HMGCS1-203ENST00000507004 HOXB3P14651 431 aaPredicted RBP14.4□□□□□ -0.1
HMGCS1-203ENST00000507004 ZFXP17010 805 aaPredicted RBP14.4□□□□□ -0.1
HMGCS1-203ENST00000507004 LHCGRP22888 699 aa14.4□□□□□ -0.1
HMGCS1-203ENST00000507004 ARHGAP25P42331 645 aa14.4□□□□□ -0.1
HMGCS1-203ENST00000507004 GPR1P46091 355 aa14.4□□□□□ -0.1
HMGCS1-203ENST00000507004 CXADRP78310 365 aa14.4□□□□□ -0.1
HMGCS1-203ENST00000507004 BIRC2Q13490 618 aa14.4□□□□□ -0.1
HMGCS1-203ENST00000507004 LRP8Q14114 963 aa14.4□□□□□ -0.1
HMGCS1-203ENST00000507004 HLTFQ14527 1009 aaKnown RBP eCLIP14.4□□□□□ -0.1
HMGCS1-203ENST00000507004 ADAMTSL4Q6UY14 1074 aa14.4□□□□□ -0.1
HMGCS1-203ENST00000507004 RAB11FIP2Q7L804 512 aa14.4□□□□□ -0.1
HMGCS1-203ENST00000507004 TECPR1Q7Z6L1 1165 aa14.4□□□□□ -0.1
HMGCS1-203ENST00000507004 RHOT2Q8IXI1 618 aa14.4□□□□□ -0.1
HMGCS1-203ENST00000507004 SNRNP27Q8WVK2 155 aaKnown RBP14.4□□□□□ -0.1
HMGCS1-203ENST00000507004 AP2M1Q96CW1 435 aa14.4□□□□□ -0.1
HMGCS1-203ENST00000507004 LYSMD1Q96S90 227 aa14.4□□□□□ -0.1
HMGCS1-203ENST00000507004 DNAJC7Q99615 494 aa14.4□□□□□ -0.1
HMGCS1-203ENST00000507004 CMKLR1Q99788 373 aa14.4□□□□□ -0.1
HMGCS1-203ENST00000507004 DPYSL5Q9BPU6 564 aa14.4□□□□□ -0.1
HMGCS1-203ENST00000507004 FRMD8Q9BZ67 464 aaPredicted RBP14.4□□□□□ -0.1
HMGCS1-203ENST00000507004 XPO4Q9C0E2 1151 aaKnown RBP14.4□□□□□ -0.1
HMGCS1-203ENST00000507004 LRIT1Q9P2V4 623 aa14.4□□□□□ -0.1
HMGCS1-203ENST00000507004 ACSL6Q9UKU0 697 aa14.4□□□□□ -0.1
HMGCS1-203ENST00000507004 SLC17A4Q9Y2C5 497 aa14.4□□□□□ -0.1
HMGCS1-203ENST00000507004 WDFY3Q8IZQ1 3526 aa14.4□□□□□ -0.1
HMGCS1-203ENST00000507004 NPIPB15A6NHN6 443 aaPredicted RBP14.39□□□□□ -0.11
HMGCS1-203ENST00000507004 MFSD11O43934 449 aa14.39□□□□□ -0.11
HMGCS1-203ENST00000507004 CEACAM5P06731 702 aa14.39□□□□□ -0.11
HMGCS1-203ENST00000507004 ETV3P41162 512 aa14.39□□□□□ -0.11
HMGCS1-203ENST00000507004 GPR3P46089 330 aa14.39□□□□□ -0.11
HMGCS1-203ENST00000507004 PDX1P52945 283 aa14.39□□□□□ -0.11
HMGCS1-203ENST00000507004 CCL7P80098 99 aa14.39□□□□□ -0.11
HMGCS1-203ENST00000507004 C19orf57Q0VDD7 668 aa14.39□□□□□ -0.11
HMGCS1-203ENST00000507004 MMRN1Q13201 1228 aa14.39□□□□□ -0.11
HMGCS1-203ENST00000507004 ZSCAN23Q3MJ62 389 aa14.39□□□□□ -0.11
HMGCS1-203ENST00000507004 ODF2Q5BJF6 829 aa14.39□□□□□ -0.11
HMGCS1-203ENST00000507004 DENND2CQ68D51 928 aa14.39□□□□□ -0.11
HMGCS1-203ENST00000507004 Q6ZVL8 140 aa14.39□□□□□ -0.11
HMGCS1-203ENST00000507004 HSD11B1LQ7Z5J1 315 aa14.39□□□□□ -0.11
HMGCS1-203ENST00000507004 SPRED1Q7Z699 444 aa14.39□□□□□ -0.11
HMGCS1-203ENST00000507004 C17orf82Q86X59 251 aaPredicted RBP14.39□□□□□ -0.11
HMGCS1-203ENST00000507004 CCDC13Q8IYE1 715 aa14.39□□□□□ -0.11
HMGCS1-203ENST00000507004 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.39□□□□□ -0.11
HMGCS1-203ENST00000507004 SLC39A7Q92504 469 aa14.39□□□□□ -0.11
HMGCS1-203ENST00000507004 SCARF2Q96GP6 870 aaPredicted RBP14.39□□□□□ -0.11
HMGCS1-203ENST00000507004 PRR11Q96HE9 360 aaPredicted RBP14.39□□□□□ -0.11
HMGCS1-203ENST00000507004 NSMCE3Q96MG7 304 aa14.39□□□□□ -0.11
HMGCS1-203ENST00000507004 LGR4Q9BXB1 951 aa14.39□□□□□ -0.11
HMGCS1-203ENST00000507004 TDRD1Q9BXT4 1180 aaKnown RBP14.39□□□□□ -0.11
HMGCS1-203ENST00000507004 ADGRE3Q9BY15 652 aa14.39□□□□□ -0.11
HMGCS1-203ENST00000507004 BRD8Q9H0E9 1235 aa14.39□□□□□ -0.11
HMGCS1-203ENST00000507004 EPB41L5Q9HCM4 733 aa14.39□□□□□ -0.11
HMGCS1-203ENST00000507004 MRPL40Q9NQ50 206 aaKnown RBP14.39□□□□□ -0.11
HMGCS1-203ENST00000507004 SSUH2Q9Y2M2 353 aa14.39□□□□□ -0.11
HMGCS1-203ENST00000507004 UNC13CQ8NB66 2214 aa14.38□□□□□ -0.11
HMGCS1-203ENST00000507004 A0A1W2PQM1 296 aa14.38□□□□□ -0.11
HMGCS1-203ENST00000507004 TTC24A2A3L6 582 aaPredicted RBP14.38□□□□□ -0.11
HMGCS1-203ENST00000507004 GOLGA6CA6NDK9 693 aa14.38□□□□□ -0.11
HMGCS1-203ENST00000507004 GOLGA6BA6NDN3 693 aa14.38□□□□□ -0.11
HMGCS1-203ENST00000507004 RHPN2P1A8MT19 583 aa14.38□□□□□ -0.11
HMGCS1-203ENST00000507004 B4DGG1 531 aa14.38□□□□□ -0.11
HMGCS1-203ENST00000507004 CPNE6O95741 557 aa14.38□□□□□ -0.11
HMGCS1-203ENST00000507004 CD48P09326 243 aa14.38□□□□□ -0.11
HMGCS1-203ENST00000507004 JMJD7P0C870 316 aa14.38□□□□□ -0.11
HMGCS1-203ENST00000507004 GOLGA6DP0CG33 693 aa14.38□□□□□ -0.11
HMGCS1-203ENST00000507004 CD82P27701 267 aa14.38□□□□□ -0.11
HMGCS1-203ENST00000507004 SLC1A1P43005 524 aa14.38□□□□□ -0.11
HMGCS1-203ENST00000507004 ZFP36L1Q07352 338 aaKnown RBP14.38□□□□□ -0.11
HMGCS1-203ENST00000507004 VAC14Q08AM6 782 aa14.38□□□□□ -0.11
HMGCS1-203ENST00000507004 NR1D2Q14995 579 aa14.38□□□□□ -0.11
HMGCS1-203ENST00000507004 LRRC38Q5VT99 294 aa14.38□□□□□ -0.11
HMGCS1-203ENST00000507004 LRRC66Q68CR7 880 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms