RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 UTP11Q9Y3A2 253 aaKnown RBP8.46□□□□□ -1.06
PDGFC-205ENST00000506880 MRFAP1Q9Y605 127 aa8.46□□□□□ -1.06
PDGFC-205ENST00000506880 CSNK1G3Q9Y6M4 447 aa8.46□□□□□ -1.06
PDGFC-205ENST00000506880 DGKBQ9Y6T7 804 aa8.46□□□□□ -1.06
PDGFC-205ENST00000506880 ARID1BQ8NFD5 2236 aaPredicted RBP8.46□□□□□ -1.06
PDGFC-205ENST00000506880 ZFC3H1O60293 1989 aaKnown RBP8.46□□□□□ -1.06
PDGFC-205ENST00000506880 CEP250Q9BV73 2442 aa8.45□□□□□ -1.06
PDGFC-205ENST00000506880 COL5A1P20908 1838 aaPredicted RBP8.45□□□□□ -1.06
PDGFC-205ENST00000506880 ASCC3Q8N3C0 2202 aaKnown RBP8.45□□□□□ -1.06
PDGFC-205ENST00000506880 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.45□□□□□ -1.06
PDGFC-205ENST00000506880 A0A1W2PR77 199 aa8.45□□□□□ -1.06
PDGFC-205ENST00000506880 CTAGE15A4D2H0 777 aa8.45□□□□□ -1.06
PDGFC-205ENST00000506880 ANTXRLA6NF34 631 aa8.45□□□□□ -1.06
PDGFC-205ENST00000506880 IGLON5A6NGN9 336 aa8.45□□□□□ -1.06
PDGFC-205ENST00000506880 MROH6A6NGR9 719 aa8.45□□□□□ -1.06
PDGFC-205ENST00000506880 NPIPB15A6NHN6 443 aaPredicted RBP8.45□□□□□ -1.06
PDGFC-205ENST00000506880 AGAP14A8MT82 685 aa8.45□□□□□ -1.06
PDGFC-205ENST00000506880 H3BM21 787 aa8.45□□□□□ -1.06
PDGFC-205ENST00000506880 TLR4O00206 839 aa8.45□□□□□ -1.06
PDGFC-205ENST00000506880 CACNB4O00305 520 aaPredicted RBP8.45□□□□□ -1.06
PDGFC-205ENST00000506880 ARHGAP33O14559 1287 aa8.45□□□□□ -1.06
PDGFC-205ENST00000506880 VEGFDO43915 354 aa8.45□□□□□ -1.06
PDGFC-205ENST00000506880 PCDHGA12O60330 932 aa8.45□□□□□ -1.06
PDGFC-205ENST00000506880 PMPCBO75439 489 aa8.45□□□□□ -1.06
PDGFC-205ENST00000506880 RECQL5O94762 991 aaPredicted RBP8.45□□□□□ -1.06
PDGFC-205ENST00000506880 FSBPO95073 299 aa8.45□□□□□ -1.06
PDGFC-205ENST00000506880 MT-CYBP00156 380 aaPredicted RBP8.45□□□□□ -1.06
PDGFC-205ENST00000506880 APRTP07741 180 aa8.45□□□□□ -1.06
PDGFC-205ENST00000506880 PDHA1P08559 390 aa8.45□□□□□ -1.06
PDGFC-205ENST00000506880 CTAGE8P0CG41 777 aa8.45□□□□□ -1.06
PDGFC-205ENST00000506880 PAMP19021 973 aa8.45□□□□□ -1.06
PDGFC-205ENST00000506880 RPL22P35268 128 aaKnown RBP8.45□□□□□ -1.06
PDGFC-205ENST00000506880 PLA2G5P39877 138 aa8.45□□□□□ -1.06
PDGFC-205ENST00000506880 PXNP49023 591 aaPredicted RBP8.45□□□□□ -1.06
PDGFC-205ENST00000506880 LMAN1P49257 510 aa8.45□□□□□ -1.06
PDGFC-205ENST00000506880 GDF10P55107 478 aa8.45□□□□□ -1.06
PDGFC-205ENST00000506880 HNRNPKP61978 463 aaKnown RBP eCLIP8.45□□□□□ -1.06
PDGFC-205ENST00000506880 PTSQ03393 145 aa8.45□□□□□ -1.06
PDGFC-205ENST00000506880 FRG1Q14331 258 aaKnown RBP8.45□□□□□ -1.06
PDGFC-205ENST00000506880 KCNJ11Q14654 390 aa8.45□□□□□ -1.06
PDGFC-205ENST00000506880 ZNF423Q2M1K9 1284 aa8.45□□□□□ -1.06
PDGFC-205ENST00000506880 DNAJC21Q5F1R6 531 aaKnown RBP8.45□□□□□ -1.06
PDGFC-205ENST00000506880 AARS2Q5JTZ9 985 aaKnown RBP8.45□□□□□ -1.06
PDGFC-205ENST00000506880 SIRPB2Q5JXA9 342 aa8.45□□□□□ -1.06
PDGFC-205ENST00000506880 HENMT1Q5T8I9 393 aaKnown RBP8.45□□□□□ -1.06
PDGFC-205ENST00000506880 LRRC66Q68CR7 880 aa8.45□□□□□ -1.06
PDGFC-205ENST00000506880 LVRNQ6Q4G3 990 aa8.45□□□□□ -1.06
PDGFC-205ENST00000506880 CRTC1Q6UUV9 634 aa8.45□□□□□ -1.06
PDGFC-205ENST00000506880 CERS6Q6ZMG9 384 aa8.45□□□□□ -1.06
PDGFC-205ENST00000506880 MACC1Q6ZN28 852 aa8.45□□□□□ -1.06
PDGFC-205ENST00000506880 GLT6D1Q7Z4J2 308 aa8.45□□□□□ -1.06
PDGFC-205ENST00000506880 ADAT2Q7Z6V5 191 aaKnown RBP8.45□□□□□ -1.06
PDGFC-205ENST00000506880 CTAGE6Q86UF2 777 aa8.45□□□□□ -1.06
PDGFC-205ENST00000506880 ZSWIM9Q86XI8 627 aa8.45□□□□□ -1.06
PDGFC-205ENST00000506880 CTAGE4Q8IX94 777 aa8.45□□□□□ -1.06
PDGFC-205ENST00000506880 TMEFF1Q8IYR6 380 aa8.45□□□□□ -1.06
PDGFC-205ENST00000506880 MMGT1Q8N4V1 131 aa8.45□□□□□ -1.06
PDGFC-205ENST00000506880 TRAM1L1Q8N609 369 aa8.45□□□□□ -1.06
PDGFC-205ENST00000506880 TP53I13Q8NBR0 393 aaPredicted RBP8.45□□□□□ -1.06
PDGFC-205ENST00000506880 IPMKQ8NFU5 416 aa8.45□□□□□ -1.06
PDGFC-205ENST00000506880 SPATA22Q8NHS9 363 aa8.45□□□□□ -1.06
PDGFC-205ENST00000506880 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.45□□□□□ -1.06
PDGFC-205ENST00000506880 FAM122AQ96E09 287 aa8.45□□□□□ -1.06
PDGFC-205ENST00000506880 KLHDC7BQ96G42 594 aa8.45□□□□□ -1.06
PDGFC-205ENST00000506880 SCARF2Q96GP6 870 aaPredicted RBP8.45□□□□□ -1.06
PDGFC-205ENST00000506880 TEX101Q9BY14 249 aa8.45□□□□□ -1.06
PDGFC-205ENST00000506880 GPR63Q9BZJ6 419 aa8.45□□□□□ -1.06
PDGFC-205ENST00000506880 SLC6A17Q9H1V8 727 aa8.45□□□□□ -1.06
PDGFC-205ENST00000506880 FAM83DQ9H4H8 585 aa8.45□□□□□ -1.06
PDGFC-205ENST00000506880 ETNK1Q9HBU6 452 aa8.45□□□□□ -1.06
PDGFC-205ENST00000506880 TM9SF3Q9HD45 589 aa8.45□□□□□ -1.06
PDGFC-205ENST00000506880 DNAAF2Q9NVR5 837 aaKnown RBP8.45□□□□□ -1.06
PDGFC-205ENST00000506880 IL17CQ9P0M4 197 aa8.45□□□□□ -1.06
PDGFC-205ENST00000506880 EIF2B4Q9UI10 523 aaKnown RBP8.45□□□□□ -1.06
PDGFC-205ENST00000506880 VPS9D1Q9Y2B5 631 aa8.45□□□□□ -1.06
PDGFC-205ENST00000506880 ZNF711Q9Y462 761 aa8.45□□□□□ -1.06
PDGFC-205ENST00000506880 DNMT3AQ9Y6K1 912 aaPredicted RBP8.45□□□□□ -1.06
PDGFC-205ENST00000506880 R4GN57 208 aa8.45□□□□□ -1.06
PDGFC-205ENST00000506880 CNOT1A5YKK6 2376 aaKnown RBP8.45□□□□□ -1.06
PDGFC-205ENST00000506880 SPTY2D1-AS1A0A0U1RR47 76 aa8.44□□□□□ -1.06
PDGFC-205ENST00000506880 NEMP2A6NFY4 417 aa8.44□□□□□ -1.06
PDGFC-205ENST00000506880 DNALI1O14645 258 aaPredicted RBP8.44□□□□□ -1.06
PDGFC-205ENST00000506880 TPP1O14773 563 aa8.44□□□□□ -1.06
PDGFC-205ENST00000506880 STX7O15400 261 aaKnown RBP8.44□□□□□ -1.06
PDGFC-205ENST00000506880 METTL18O95568 372 aa8.44□□□□□ -1.06
PDGFC-205ENST00000506880 TUBBP07437 444 aa8.44□□□□□ -1.06
PDGFC-205ENST00000506880 MYCLP1P12525 358 aaPredicted RBP8.44□□□□□ -1.06
PDGFC-205ENST00000506880 ITPKAP23677 461 aa8.44□□□□□ -1.06
PDGFC-205ENST00000506880 GKP32189 559 aa8.44□□□□□ -1.06
PDGFC-205ENST00000506880 SPAM1P38567 509 aa8.44□□□□□ -1.06
PDGFC-205ENST00000506880 PTGER3P43115 390 aa8.44□□□□□ -1.06
PDGFC-205ENST00000506880 CTSKP43235 329 aa8.44□□□□□ -1.06
PDGFC-205ENST00000506880 MAGEA3P43357 314 aa8.44□□□□□ -1.06
PDGFC-205ENST00000506880 CLCNKAP51800 687 aa8.44□□□□□ -1.06
PDGFC-205ENST00000506880 THOP1P52888 689 aa8.44□□□□□ -1.06
PDGFC-205ENST00000506880 ACVR1Q04771 509 aa8.44□□□□□ -1.06
PDGFC-205ENST00000506880 GPS1Q13098 491 aa8.44□□□□□ -1.06
PDGFC-205ENST00000506880 CALCOCO2Q13137 446 aa8.44□□□□□ -1.06
PDGFC-205ENST00000506880 MSLNQ13421 630 aaPredicted RBP8.44□□□□□ -1.06
PDGFC-205ENST00000506880 SNX1Q13596 522 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms