RNA–Protein interactions for RNA: ENST00000506154.1

NEDD4-205, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 6,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-205ENST00000506154 TP63Q9H3D4 680 aaPredicted RBP2.28□□□□□ -2.04
NEDD4-205ENST00000506154 SP140LQ9H930 580 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 CNOT10Q9H9A5 744 aaKnown RBP2.28□□□□□ -2.04
NEDD4-205ENST00000506154 DBNDD1Q9H9R9 158 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 ZSCAN32Q9NX65 697 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 SELENONQ9NZV5 590 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 ENPP5Q9UJA9 477 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 CDV3Q9UKY7 258 aaKnown RBP2.28□□□□□ -2.04
NEDD4-205ENST00000506154 DERAQ9Y315 318 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 MAU2Q9Y6X3 613 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 ZNF106Q9H2Y7 1883 aaKnown RBP2.28□□□□□ -2.04
NEDD4-205ENST00000506154 URADA6NGE7 173 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 DDTLA6NHG4 134 aaPredicted RBP2.28□□□□□ -2.04
NEDD4-205ENST00000506154 HACD1B0YJ81 288 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 BRINP1O60477 761 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 MAGEC1O60732 1142 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 EIF1BO60739 113 aaKnown RBP2.28□□□□□ -2.04
NEDD4-205ENST00000506154 AOC2O75106 756 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 SNX4O95219 450 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 RPLP1P05386 114 aaKnown RBP2.28□□□□□ -2.04
NEDD4-205ENST00000506154 SYPP08247 313 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 ITGA2P17301 1181 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 CTGFP29279 349 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 EIF1P41567 113 aaKnown RBP2.28□□□□□ -2.04
NEDD4-205ENST00000506154 TIMM10P62072 90 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 RHAGQ02094 409 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 CXCL9Q07325 125 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 MORF4L2Q15014 288 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 CYTH1Q15438 398 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 NFIL3Q16649 462 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 VWA3BQ502W6 1294 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 ODF2Q5BJF6 829 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 FAM69AQ5T7M9 428 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 BEND4Q6ZU67 534 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 TMPRSS9Q7Z410 1059 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 LAPTM4BQ86VI4 370 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 IFT20Q8IY31 132 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 ZNF687Q8N1G0 1237 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 FAM109AQ8N4B1 249 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 PSD4Q8NDX1 1056 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 RASGRP4Q8TDF6 673 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 DENND1AQ8TEH3 1009 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 SLC22A18Q96BI1 424 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 CFAP57Q96MR6 1250 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 KREMEN1Q96MU8 473 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 KCNC2Q96PR1 638 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 C17orf62Q9BQA9 187 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 RSRP1Q9BUV0 290 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 GP6Q9HCN6 339 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 MRPS30Q9NP92 439 aaKnown RBP2.28□□□□□ -2.04
NEDD4-205ENST00000506154 LZTFL1Q9NQ48 299 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 ELOVL2Q9NXB9 296 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 LARSQ9P2J5 1176 aaKnown RBP2.28□□□□□ -2.04
NEDD4-205ENST00000506154 SLC39A10Q9ULF5 831 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 UGT2A1Q9Y4X1 527 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 PLXNA4Q9HCM2 1894 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 NPHP3-ACAD11A0A0J9YXS1 232 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 A0A1W2PPL8 197 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 ILVBLA1L0T0 632 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 AGAP5A6NIR3 686 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 FAM170BA6NMN3 283 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 LINC00587B1AMM8 73 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 PPEF2O14830 753 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 CETN3O15182 167 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 SEC14L5O43304 696 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 DNAJB5O75953 348 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 BMP10O95393 424 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 ERBB2P04626 1255 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 PGK2P07205 417 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 CELA3BP08861 270 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 EEF2P13639 858 aaKnown RBP2.28□□□□□ -2.04
NEDD4-205ENST00000506154 SNRPBP14678 240 aaKnown RBP2.28□□□□□ -2.04
NEDD4-205ENST00000506154 HNRNPLP14866 589 aaKnown RBP eCLIP2.28□□□□□ -2.04
NEDD4-205ENST00000506154 SMPD1P17405 629 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 HADHAP40939 763 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 KIR3DL2P43630 455 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 MYL6P60660 151 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 GUCY2DQ02846 1103 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 ORC2Q13416 577 aaPredicted RBP2.28□□□□□ -2.04
NEDD4-205ENST00000506154 DPCR1Q3MIW9 517 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 FAM153CQ494X1 144 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 EFHC2Q5JST6 749 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 IRAK1BP1Q5VVH5 260 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 RNF219Q5W0B1 726 aaPredicted RBP2.28□□□□□ -2.04
NEDD4-205ENST00000506154 ESRP1Q6NXG1 681 aaKnown RBP2.28□□□□□ -2.04
NEDD4-205ENST00000506154 CRTC1Q6UUV9 634 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 VSTM1Q6UX27 236 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 CEP128Q6ZU80 1094 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 AKAP14Q86UN6 197 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 GPR180Q86V85 440 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 GPC2Q8N158 579 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 EIF4E3Q8N5X7 224 aaKnown RBP2.28□□□□□ -2.04
NEDD4-205ENST00000506154 OR8K3Q8NH51 312 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 PSPC1Q8WXF1 523 aaKnown RBP2.28□□□□□ -2.04
NEDD4-205ENST00000506154 KCNJ9Q92806 393 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 GLG1Q92896 1179 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 BORCS5Q969J3 196 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 PLEKHA8Q96JA3 519 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 UBXN10Q96LJ8 280 aa2.28□□□□□ -2.04
NEDD4-205ENST00000506154 SHARPINQ9H0F6 387 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms