RNA–Protein interactions for RNA: ENST00000505458.5

NFKB1-205, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-205ENST00000505458 HERVK_113P63132 956 aa11.32□□□□□ -0.6
NFKB1-205ENST00000505458 KDSRQ06136 332 aa11.32□□□□□ -0.6
NFKB1-205ENST00000505458 SULT2A1Q06520 285 aa11.32□□□□□ -0.6
NFKB1-205ENST00000505458 ARL14EPQ8N8R7 260 aaPredicted RBP11.32□□□□□ -0.6
NFKB1-205ENST00000505458 ZNF784Q8NCA9 323 aaPredicted RBP11.32□□□□□ -0.6
NFKB1-205ENST00000505458 OR4K2Q8NGD2 314 aa11.32□□□□□ -0.6
NFKB1-205ENST00000505458 KCNJ9Q92806 393 aa11.32□□□□□ -0.6
NFKB1-205ENST00000505458 ERVK-6Q9BXR3 956 aa11.32□□□□□ -0.6
NFKB1-205ENST00000505458 DENND2DQ9H6A0 471 aaPredicted RBP11.32□□□□□ -0.6
NFKB1-205ENST00000505458 ATP13A3Q9H7F0 1226 aa11.32□□□□□ -0.6
NFKB1-205ENST00000505458 ZNF334Q9HCZ1 680 aaPredicted RBP11.32□□□□□ -0.6
NFKB1-205ENST00000505458 MARCH4Q9P2E8 410 aaPredicted RBP11.32□□□□□ -0.6
NFKB1-205ENST00000505458 APPL1Q9UKG1 709 aa11.32□□□□□ -0.6
NFKB1-205ENST00000505458 RGSL1A5PLK6 1076 aa11.31□□□□□ -0.6
NFKB1-205ENST00000505458 GREM1O60565 184 aa11.31□□□□□ -0.6
NFKB1-205ENST00000505458 SRP72O76094 671 aaKnown RBP11.31□□□□□ -0.6
NFKB1-205ENST00000505458 GLUD1P00367 558 aa11.31□□□□□ -0.6
NFKB1-205ENST00000505458 PRLP01236 227 aa11.31□□□□□ -0.6
NFKB1-205ENST00000505458 CSF2RAP15509 400 aa11.31□□□□□ -0.6
NFKB1-205ENST00000505458 ARRB2P32121 409 aa11.31□□□□□ -0.6
NFKB1-205ENST00000505458 KDM1BQ8NB78 822 aa11.31□□□□□ -0.6
NFKB1-205ENST00000505458 OR13C4Q8NGS5 318 aa11.31□□□□□ -0.6
NFKB1-205ENST00000505458 CEP44Q9C0F1 390 aa11.31□□□□□ -0.6
NFKB1-205ENST00000505458 ABCB8Q9NUT2 735 aa11.31□□□□□ -0.6
NFKB1-205ENST00000505458 WBP1LQ9NX94 342 aa11.31□□□□□ -0.6
NFKB1-205ENST00000505458 PLA2G4CQ9UP65 541 aa11.31□□□□□ -0.6
NFKB1-205ENST00000505458 OAS3Q9Y6K5 1087 aaKnown RBP11.31□□□□□ -0.6
NFKB1-205ENST00000505458 SLC30A1Q9Y6M5 507 aa11.31□□□□□ -0.6
NFKB1-205ENST00000505458 STX16-NPEPL1H3BU86 382 aa11.31□□□□□ -0.6
NFKB1-205ENST00000505458 STX16O14662 325 aa11.31□□□□□ -0.6
NFKB1-205ENST00000505458 MYCP01106 439 aaPredicted RBP11.31□□□□□ -0.6
NFKB1-205ENST00000505458 COX4I1P13073 169 aa11.31□□□□□ -0.6
NFKB1-205ENST00000505458 PKMP14618 531 aaKnown RBP11.31□□□□□ -0.6
NFKB1-205ENST00000505458 CSKP41240 450 aa11.31□□□□□ -0.6
NFKB1-205ENST00000505458 UBAP2LQ14157 1087 aaKnown RBP11.31□□□□□ -0.6
NFKB1-205ENST00000505458 PSRC1Q6PGN9 363 aaPredicted RBP11.31□□□□□ -0.6
NFKB1-205ENST00000505458 C16orf59Q7L2K0 433 aa11.31□□□□□ -0.6
NFKB1-205ENST00000505458 TMC8Q8IU68 726 aa11.31□□□□□ -0.6
NFKB1-205ENST00000505458 TTC30BQ8N4P2 665 aa11.31□□□□□ -0.6
NFKB1-205ENST00000505458 OR52K2Q8NGK3 314 aa11.31□□□□□ -0.6
NFKB1-205ENST00000505458 CCT7Q99832 543 aa11.31□□□□□ -0.6
NFKB1-205ENST00000505458 SMPD4Q9NXE4 827 aa11.31□□□□□ -0.6
NFKB1-205ENST00000505458 ZNF711Q9Y462 761 aa11.31□□□□□ -0.6
NFKB1-205ENST00000505458 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.31□□□□□ -0.6
NFKB1-205ENST00000505458 TGM5O43548 720 aa11.31□□□□□ -0.6
NFKB1-205ENST00000505458 PGLSO95336 258 aa11.31□□□□□ -0.6
NFKB1-205ENST00000505458 C8AP07357 584 aa11.31□□□□□ -0.6
NFKB1-205ENST00000505458 TCF3P15923 654 aa11.31□□□□□ -0.6
NFKB1-205ENST00000505458 RPS3P23396 243 aaKnown RBP eCLIP11.31□□□□□ -0.6
NFKB1-205ENST00000505458 EPHA5P54756 1037 aa11.31□□□□□ -0.6
NFKB1-205ENST00000505458 BCL2L1Q07817 233 aa11.31□□□□□ -0.6
NFKB1-205ENST00000505458 USP4Q13107 963 aa11.31□□□□□ -0.6
NFKB1-205ENST00000505458 ZNF460Q14592 562 aa11.31□□□□□ -0.6
NFKB1-205ENST00000505458 CCDC6Q16204 474 aa11.31□□□□□ -0.6
NFKB1-205ENST00000505458 LRRC26Q2I0M4 334 aa11.31□□□□□ -0.6
NFKB1-205ENST00000505458 ISCA2Q86U28 154 aa11.31□□□□□ -0.6
NFKB1-205ENST00000505458 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.31□□□□□ -0.6
NFKB1-205ENST00000505458 LSMEM2Q8N112 164 aa11.31□□□□□ -0.6
NFKB1-205ENST00000505458 CBARPQ8N350 705 aaPredicted RBP11.31□□□□□ -0.6
NFKB1-205ENST00000505458 KREMEN2Q8NCW0 462 aa11.31□□□□□ -0.6
NFKB1-205ENST00000505458 PHOSPHO2Q8TCD6 241 aa11.31□□□□□ -0.6
NFKB1-205ENST00000505458 DDI1Q8WTU0 396 aa11.31□□□□□ -0.6
NFKB1-205ENST00000505458 OTUB2Q96DC9 234 aa11.31□□□□□ -0.6
NFKB1-205ENST00000505458 ALG14Q96F25 216 aa11.31□□□□□ -0.6
NFKB1-205ENST00000505458 RSRC1Q96IZ7 334 aaKnown RBP11.31□□□□□ -0.6
NFKB1-205ENST00000505458 MEAF6Q9HAF1 191 aa11.31□□□□□ -0.6
NFKB1-205ENST00000505458 CD248Q9HCU0 757 aa11.31□□□□□ -0.6
NFKB1-205ENST00000505458 GTSE1Q9NYZ3 720 aa11.31□□□□□ -0.6
NFKB1-205ENST00000505458 TRMT6Q9UJA5 497 aaKnown RBP11.31□□□□□ -0.6
NFKB1-205ENST00000505458 GRID2O43424 1007 aa11.3□□□□□ -0.6
NFKB1-205ENST00000505458 CCNT2O60583 730 aaKnown RBP11.3□□□□□ -0.6
NFKB1-205ENST00000505458 CHRNGP07510 517 aa11.3□□□□□ -0.6
NFKB1-205ENST00000505458 CNPP09543 421 aaKnown RBP11.3□□□□□ -0.6
NFKB1-205ENST00000505458 SERPINA4P29622 427 aa11.3□□□□□ -0.6
NFKB1-205ENST00000505458 HMGCLP35914 325 aa11.3□□□□□ -0.6
NFKB1-205ENST00000505458 RGRP47804 291 aa11.3□□□□□ -0.6
NFKB1-205ENST00000505458 SGSHP51688 502 aa11.3□□□□□ -0.6
NFKB1-205ENST00000505458 CDKN2DP55273 166 aa11.3□□□□□ -0.6
NFKB1-205ENST00000505458 SNRPD1P62314 119 aaKnown RBP11.3□□□□□ -0.6
NFKB1-205ENST00000505458 TRAF2Q12933 501 aa11.3□□□□□ -0.6
NFKB1-205ENST00000505458 SQLEQ14534 574 aa11.3□□□□□ -0.6
NFKB1-205ENST00000505458 ULK2Q8IYT8 1036 aa11.3□□□□□ -0.6
NFKB1-205ENST00000505458 ADAMTS19Q8TE59 1207 aa11.3□□□□□ -0.6
NFKB1-205ENST00000505458 DIS3LQ8TF46 1054 aaKnown RBP11.3□□□□□ -0.6
NFKB1-205ENST00000505458 PRR11Q96HE9 360 aaPredicted RBP11.3□□□□□ -0.6
NFKB1-205ENST00000505458 FAM161BQ96MY7 647 aa11.3□□□□□ -0.6
NFKB1-205ENST00000505458 MTIF3Q9H2K0 278 aaKnown RBP11.3□□□□□ -0.6
NFKB1-205ENST00000505458 CFAP97Q9P2B7 532 aa11.3□□□□□ -0.6
NFKB1-205ENST00000505458 TBC1D14Q9P2M4 693 aa11.3□□□□□ -0.6
NFKB1-205ENST00000505458 C15orf41Q9Y2V0 281 aa11.3□□□□□ -0.6
NFKB1-205ENST00000505458 KCTD3Q9Y597 815 aa11.3□□□□□ -0.6
NFKB1-205ENST00000505458 SPO11Q9Y5K1 396 aa11.3□□□□□ -0.6
NFKB1-205ENST00000505458 ITGALP20701 1170 aa11.3□□□□□ -0.6
NFKB1-205ENST00000505458 SP100P23497 879 aaPredicted RBP11.3□□□□□ -0.6
NFKB1-205ENST00000505458 SLC9B1Q4ZJI4 515 aa11.3□□□□□ -0.6
NFKB1-205ENST00000505458 ZNF789Q5FWF6 425 aa11.3□□□□□ -0.6
NFKB1-205ENST00000505458 PPM1LQ5SGD2 360 aa11.3□□□□□ -0.6
NFKB1-205ENST00000505458 GPR158Q5T848 1215 aa11.3□□□□□ -0.6
NFKB1-205ENST00000505458 CUZD1Q86UP6 607 aa11.3□□□□□ -0.6
NFKB1-205ENST00000505458 SP7Q8TDD2 431 aaPredicted RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms