RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 KIFC1Q9BW19 673 aa4.94□□□□□ -1.62
LMNB1-208ENST00000504788 GPR174Q9BXC1 333 aa4.94□□□□□ -1.62
LMNB1-208ENST00000504788 TXLNGYQ9BZA5 131 aa4.94□□□□□ -1.62
LMNB1-208ENST00000504788 PHACTR1Q9C0D0 580 aa4.94□□□□□ -1.62
LMNB1-208ENST00000504788 IL26Q9NPH9 171 aa4.94□□□□□ -1.62
LMNB1-208ENST00000504788 RIMKLBQ9ULI2 386 aa4.94□□□□□ -1.62
LMNB1-208ENST00000504788 COQ6Q9Y2Z9 468 aa4.94□□□□□ -1.62
LMNB1-208ENST00000504788 SNX24Q9Y343 169 aa4.94□□□□□ -1.62
LMNB1-208ENST00000504788 ZNF711Q9Y462 761 aa4.94□□□□□ -1.62
LMNB1-208ENST00000504788 PCYT1BQ9Y5K3 369 aaPredicted RBP4.94□□□□□ -1.62
LMNB1-208ENST00000504788 ST14Q9Y5Y6 855 aa4.94□□□□□ -1.62
LMNB1-208ENST00000504788 ARL5AQ9Y689 179 aa4.94□□□□□ -1.62
LMNB1-208ENST00000504788 TEX264Q9Y6I9 313 aa4.94□□□□□ -1.62
LMNB1-208ENST00000504788 RIF1Q5UIP0 2472 aaKnown RBP4.94□□□□□ -1.62
LMNB1-208ENST00000504788 ARHGEF17Q96PE2 2063 aaPredicted RBP4.94□□□□□ -1.62
LMNB1-208ENST00000504788 COL27A1Q8IZC6 1860 aaPredicted RBP4.94□□□□□ -1.62
LMNB1-208ENST00000504788 TDRD6O60522 2096 aaKnown RBP4.93□□□□□ -1.62
LMNB1-208ENST00000504788 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.93□□□□□ -1.62
LMNB1-208ENST00000504788 PRR19A6NJB7 356 aa4.93□□□□□ -1.62
LMNB1-208ENST00000504788 EFCAB8A8MWE9 144 aa4.93□□□□□ -1.62
LMNB1-208ENST00000504788 A8MX80 341 aa4.93□□□□□ -1.62
LMNB1-208ENST00000504788 H0Y8X5 98 aa4.93□□□□□ -1.62
LMNB1-208ENST00000504788 SGTAO43765 313 aa4.93□□□□□ -1.62
LMNB1-208ENST00000504788 RNGTTO60942 597 aaKnown RBP4.93□□□□□ -1.62
LMNB1-208ENST00000504788 PPFIA2O75334 1257 aa4.93□□□□□ -1.62
LMNB1-208ENST00000504788 RPP40O75818 363 aaKnown RBP4.93□□□□□ -1.62
LMNB1-208ENST00000504788 RECQL5O94762 991 aaPredicted RBP4.93□□□□□ -1.62
LMNB1-208ENST00000504788 STK10O94804 968 aaKnown RBP4.93□□□□□ -1.62
LMNB1-208ENST00000504788 PAK4O96013 591 aaPredicted RBP4.93□□□□□ -1.62
LMNB1-208ENST00000504788 NUDT7P0C024 238 aa4.93□□□□□ -1.62
LMNB1-208ENST00000504788 ZNF30P17039 623 aa4.93□□□□□ -1.62
LMNB1-208ENST00000504788 CARSP49589 748 aaKnown RBP4.93□□□□□ -1.62
LMNB1-208ENST00000504788 PFN3P60673 137 aa4.93□□□□□ -1.62
LMNB1-208ENST00000504788 RPS21P63220 83 aaKnown RBP4.93□□□□□ -1.62
LMNB1-208ENST00000504788 ELP6Q0PNE2 266 aa4.93□□□□□ -1.62
LMNB1-208ENST00000504788 SEMA3AQ14563 771 aa4.93□□□□□ -1.62
LMNB1-208ENST00000504788 TAF1AQ15573 450 aaPredicted RBP4.93□□□□□ -1.62
LMNB1-208ENST00000504788 KHDC1Q4VXA5 237 aaKnown RBP4.93□□□□□ -1.62
LMNB1-208ENST00000504788 CCDC38Q502W7 563 aa4.93□□□□□ -1.62
LMNB1-208ENST00000504788 USP39Q53GS9 565 aaKnown RBP4.93□□□□□ -1.62
LMNB1-208ENST00000504788 PLA2G2CQ5R387 149 aa4.93□□□□□ -1.62
LMNB1-208ENST00000504788 IZUMO3Q5VZ72 239 aa4.93□□□□□ -1.62
LMNB1-208ENST00000504788 KIAA0895LQ68EN5 471 aa4.93□□□□□ -1.62
LMNB1-208ENST00000504788 KIAA1161Q6NSJ0 714 aa4.93□□□□□ -1.62
LMNB1-208ENST00000504788 ESRP1Q6NXG1 681 aaKnown RBP4.93□□□□□ -1.62
LMNB1-208ENST00000504788 C8orf74Q6P047 294 aa4.93□□□□□ -1.62
LMNB1-208ENST00000504788 GSTA5Q7RTV2 222 aa4.93□□□□□ -1.62
LMNB1-208ENST00000504788 LINC00523Q86TU6 105 aa4.93□□□□□ -1.62
LMNB1-208ENST00000504788 RELL1Q8IUW5 271 aa4.93□□□□□ -1.62
LMNB1-208ENST00000504788 TMEFF1Q8IYR6 380 aa4.93□□□□□ -1.62
LMNB1-208ENST00000504788 SLC22A18ASQ8N1D0 253 aa4.93□□□□□ -1.62
LMNB1-208ENST00000504788 PNPLA1Q8N8W4 532 aa4.93□□□□□ -1.62
LMNB1-208ENST00000504788 OR13C4Q8NGS5 318 aa4.93□□□□□ -1.62
LMNB1-208ENST00000504788 PTCD2Q8WV60 388 aaKnown RBP4.93□□□□□ -1.62
LMNB1-208ENST00000504788 SCAMP4Q969E2 229 aa4.93□□□□□ -1.62
LMNB1-208ENST00000504788 MFSD3Q96ES6 412 aa4.93□□□□□ -1.62
LMNB1-208ENST00000504788 SNF8Q96H20 258 aa4.93□□□□□ -1.62
LMNB1-208ENST00000504788 COX14Q96I36 57 aa4.93□□□□□ -1.62
LMNB1-208ENST00000504788 PHOX2BQ99453 314 aa4.93□□□□□ -1.62
LMNB1-208ENST00000504788 OMDQ99983 421 aa4.93□□□□□ -1.62
LMNB1-208ENST00000504788 WRAP53Q9BUR4 548 aaKnown RBP4.93□□□□□ -1.62
LMNB1-208ENST00000504788 ADGRE3Q9BY15 652 aa4.93□□□□□ -1.62
LMNB1-208ENST00000504788 SLC17A9Q9BYT1 436 aa4.93□□□□□ -1.62
LMNB1-208ENST00000504788 ABCG8Q9H221 673 aa4.93□□□□□ -1.62
LMNB1-208ENST00000504788 KCNH6Q9H252 994 aa4.93□□□□□ -1.62
LMNB1-208ENST00000504788 EPB41L4BQ9H329 900 aa4.93□□□□□ -1.62
LMNB1-208ENST00000504788 TRABDQ9H4I3 376 aa4.93□□□□□ -1.62
LMNB1-208ENST00000504788 ZFYVE1Q9HBF4 777 aa4.93□□□□□ -1.62
LMNB1-208ENST00000504788 CHRAC1Q9NRG0 131 aa4.93□□□□□ -1.62
LMNB1-208ENST00000504788 SYBUQ9NX95 663 aa4.93□□□□□ -1.62
LMNB1-208ENST00000504788 GULP1Q9UBP9 304 aa4.93□□□□□ -1.62
LMNB1-208ENST00000504788 SLC2A6Q9UGQ3 507 aa4.93□□□□□ -1.62
LMNB1-208ENST00000504788 ASIC3Q9UHC3 531 aa4.93□□□□□ -1.62
LMNB1-208ENST00000504788 PILRBQ9UKJ0 227 aa4.93□□□□□ -1.62
LMNB1-208ENST00000504788 LHX6Q9UPM6 363 aa4.93□□□□□ -1.62
LMNB1-208ENST00000504788 R4GN57 208 aa4.93□□□□□ -1.62
LMNB1-208ENST00000504788 ZFHX2Q9C0A1 2572 aaPredicted RBP4.93□□□□□ -1.62
LMNB1-208ENST00000504788 IGLV3-16A0A075B6K0 115 aa4.93□□□□□ -1.62
LMNB1-208ENST00000504788 C1orf232A0A0U1RR37 186 aa4.93□□□□□ -1.62
LMNB1-208ENST00000504788 GOLGA8MH3BSY2 632 aa4.93□□□□□ -1.62
LMNB1-208ENST00000504788 CCL22O00626 93 aa4.93□□□□□ -1.62
LMNB1-208ENST00000504788 PSMD3O43242 534 aa4.93□□□□□ -1.62
LMNB1-208ENST00000504788 BUD23O43709 281 aaKnown RBP4.93□□□□□ -1.62
LMNB1-208ENST00000504788 PRSS56P0CW18 603 aa4.93□□□□□ -1.62
LMNB1-208ENST00000504788 ACADMP11310 421 aa4.93□□□□□ -1.62
LMNB1-208ENST00000504788 ITPKAP23677 461 aa4.93□□□□□ -1.62
LMNB1-208ENST00000504788 MGAT1P26572 445 aa4.93□□□□□ -1.62
LMNB1-208ENST00000504788 MAOBP27338 520 aa4.93□□□□□ -1.62
LMNB1-208ENST00000504788 NMBRP28336 390 aa4.93□□□□□ -1.62
LMNB1-208ENST00000504788 TEAD1P28347 426 aa4.93□□□□□ -1.62
LMNB1-208ENST00000504788 TNFRSF8P28908 595 aa4.93□□□□□ -1.62
LMNB1-208ENST00000504788 FOXN2P32314 431 aa4.93□□□□□ -1.62
LMNB1-208ENST00000504788 ADCY8P40145 1251 aa4.93□□□□□ -1.62
LMNB1-208ENST00000504788 CDKN1CP49918 316 aaPredicted RBP4.93□□□□□ -1.62
LMNB1-208ENST00000504788 FAM193AP78312 1265 aa4.93□□□□□ -1.62
LMNB1-208ENST00000504788 B4GALNT1Q00973 533 aa4.93□□□□□ -1.62
LMNB1-208ENST00000504788 DHX9Q08211 1270 aaKnown RBP4.93□□□□□ -1.62
LMNB1-208ENST00000504788 PRPSAP1Q14558 356 aa4.93□□□□□ -1.62
LMNB1-208ENST00000504788 POU6F1Q14863 301 aa4.93□□□□□ -1.62
LMNB1-208ENST00000504788 PPP1R7Q15435 360 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms