RNA–Protein interactions for RNA: ENST00000504543.1

USP17L28-201, Transcript of ubiquitin specific peptidase 17-like family member 28, humanhuman

APPRIS P1 BASIC

Gene USP17L28, Length 1,593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L28-201ENST00000504543 UGP2Q16851 508 aa10.23□□□□□ -0.77
USP17L28-201ENST00000504543 USP39Q53GS9 565 aaKnown RBP10.23□□□□□ -0.77
USP17L28-201ENST00000504543 TEDDM1Q5T9Z0 273 aa10.23□□□□□ -0.77
USP17L28-201ENST00000504543 C6orf89Q6UWU4 347 aa10.23□□□□□ -0.77
USP17L28-201ENST00000504543 NLRP9Q7RTR0 991 aa10.23□□□□□ -0.77
USP17L28-201ENST00000504543 DSG4Q86SJ6 1040 aa10.23□□□□□ -0.77
USP17L28-201ENST00000504543 PGBD5Q8N414 524 aa10.23□□□□□ -0.77
USP17L28-201ENST00000504543 PCDH20Q8N6Y1 951 aaKnown RBP10.23□□□□□ -0.77
USP17L28-201ENST00000504543 CCDC197Q8NCU1 140 aa10.23□□□□□ -0.77
USP17L28-201ENST00000504543 RAB3IL1Q8TBN0 382 aa10.23□□□□□ -0.77
USP17L28-201ENST00000504543 LRRC8CQ8TDW0 803 aa10.23□□□□□ -0.77
USP17L28-201ENST00000504543 CYB5D2Q8WUJ1 264 aa10.23□□□□□ -0.77
USP17L28-201ENST00000504543 SORCS1Q8WY21 1168 aa10.23□□□□□ -0.77
USP17L28-201ENST00000504543 PTPRN2Q92932 1015 aa10.23□□□□□ -0.77
USP17L28-201ENST00000504543 MFSD3Q96ES6 412 aa10.23□□□□□ -0.77
USP17L28-201ENST00000504543 LRIG1Q96JA1 1093 aa10.23□□□□□ -0.77
USP17L28-201ENST00000504543 LOXL4Q96JB6 756 aa10.23□□□□□ -0.77
USP17L28-201ENST00000504543 ZC3H10Q96K80 434 aaKnown RBP10.23□□□□□ -0.77
USP17L28-201ENST00000504543 CABS1Q96KC9 395 aa10.23□□□□□ -0.77
USP17L28-201ENST00000504543 MRGPRX1Q96LB2 322 aa10.23□□□□□ -0.77
USP17L28-201ENST00000504543 PSKH2Q96QS6 385 aa10.23□□□□□ -0.77
USP17L28-201ENST00000504543 PCED1AQ9H1Q7 454 aa10.23□□□□□ -0.77
USP17L28-201ENST00000504543 RSPH9Q9H1X1 276 aaPredicted RBP10.23□□□□□ -0.77
USP17L28-201ENST00000504543 CHRAC1Q9NRG0 131 aa10.23□□□□□ -0.77
USP17L28-201ENST00000504543 TREX1Q9NSU2 369 aa10.23□□□□□ -0.77
USP17L28-201ENST00000504543 FGFR1OP2Q9NVK5 253 aa10.23□□□□□ -0.77
USP17L28-201ENST00000504543 UBA2Q9UBT2 640 aaPredicted RBP10.23□□□□□ -0.77
USP17L28-201ENST00000504543 GRID1Q9ULK0 1009 aa10.23□□□□□ -0.77
USP17L28-201ENST00000504543 PLLPQ9Y342 182 aa10.23□□□□□ -0.77
USP17L28-201ENST00000504543 PSAT1Q9Y617 370 aa10.23□□□□□ -0.77
USP17L28-201ENST00000504543 LOC285095A0A1B0GVY8 99 aa10.22□□□□□ -0.77
USP17L28-201ENST00000504543 TCRBV21S2A2A0A5A6 115 aa10.22□□□□□ -0.77
USP17L28-201ENST00000504543 WASH3PC4AMC7 463 aa10.22□□□□□ -0.77
USP17L28-201ENST00000504543 H0Y858 1186 aa10.22□□□□□ -0.77
USP17L28-201ENST00000504543 GOLGA8RI6L899 631 aa10.22□□□□□ -0.77
USP17L28-201ENST00000504543 KLF11O14901 512 aa10.22□□□□□ -0.77
USP17L28-201ENST00000504543 GLRA3O75311 464 aa10.22□□□□□ -0.77
USP17L28-201ENST00000504543 CD160O95971 181 aa10.22□□□□□ -0.77
USP17L28-201ENST00000504543 ALDOAP04075 364 aaKnown RBP10.22□□□□□ -0.77
USP17L28-201ENST00000504543 NMBRP28336 390 aa10.22□□□□□ -0.77
USP17L28-201ENST00000504543 OXTRP30559 389 aa10.22□□□□□ -0.77
USP17L28-201ENST00000504543 P2RY2P41231 377 aa10.22□□□□□ -0.77
USP17L28-201ENST00000504543 POLD2P49005 469 aa10.22□□□□□ -0.77
USP17L28-201ENST00000504543 COPAP53621 1224 aa10.22□□□□□ -0.77
USP17L28-201ENST00000504543 ARF5P84085 180 aa10.22□□□□□ -0.77
USP17L28-201ENST00000504543 DSC2Q02487 901 aa10.22□□□□□ -0.77
USP17L28-201ENST00000504543 LAMB3Q13751 1172 aa10.22□□□□□ -0.77
USP17L28-201ENST00000504543 INSCQ1MX18 579 aa10.22□□□□□ -0.77
USP17L28-201ENST00000504543 C9orf64Q5T6V5 341 aa10.22□□□□□ -0.77
USP17L28-201ENST00000504543 MROH9Q5TGP6 573 aa10.22□□□□□ -0.77
USP17L28-201ENST00000504543 KIAA1211LQ6NV74 962 aa10.22□□□□□ -0.77
USP17L28-201ENST00000504543 KYAT3Q6YP21 454 aaKnown RBP10.22□□□□□ -0.77
USP17L28-201ENST00000504543 USP30Q70CQ3 517 aa10.22□□□□□ -0.77
USP17L28-201ENST00000504543 GALNT7Q86SF2 657 aa10.22□□□□□ -0.77
USP17L28-201ENST00000504543 TRIM42Q8IWZ5 723 aa10.22□□□□□ -0.77
USP17L28-201ENST00000504543 MDGA1Q8NFP4 955 aa10.22□□□□□ -0.77
USP17L28-201ENST00000504543 OR7D4Q8NG98 312 aa10.22□□□□□ -0.77
USP17L28-201ENST00000504543 GABPB2Q8TAK5 448 aaPredicted RBP10.22□□□□□ -0.77
USP17L28-201ENST00000504543 ATOH1Q92858 354 aaPredicted RBP10.22□□□□□ -0.77
USP17L28-201ENST00000504543 FAM131CQ96AQ9 280 aa10.22□□□□□ -0.77
USP17L28-201ENST00000504543 HHIPQ96QV1 700 aa10.22□□□□□ -0.77
USP17L28-201ENST00000504543 KLF6Q99612 283 aaPredicted RBP10.22□□□□□ -0.77
USP17L28-201ENST00000504543 FAM167BQ9BTA0 163 aa10.22□□□□□ -0.77
USP17L28-201ENST00000504543 ITM2CQ9NQX7 267 aa10.22□□□□□ -0.77
USP17L28-201ENST00000504543 C20orf96Q9NUD7 363 aaPredicted RBP10.22□□□□□ -0.77
USP17L28-201ENST00000504543 PCMTD2Q9NV79 361 aa10.22□□□□□ -0.77
USP17L28-201ENST00000504543 USP36Q9P275 1121 aaKnown RBP10.22□□□□□ -0.77
USP17L28-201ENST00000504543 SLC17A7Q9P2U7 560 aa10.22□□□□□ -0.77
USP17L28-201ENST00000504543 SLCO3A1Q9UIG8 710 aa10.22□□□□□ -0.77
USP17L28-201ENST00000504543 RIMKLBQ9ULI2 386 aa10.22□□□□□ -0.77
USP17L28-201ENST00000504543 EML5Q05BV3 1969 aa10.22□□□□□ -0.77
USP17L28-201ENST00000504543 SPAG17Q6Q759 2223 aa10.22□□□□□ -0.77
USP17L28-201ENST00000504543 BIRC5O15392 142 aa10.22□□□□□ -0.77
USP17L28-201ENST00000504543 SNAP91O60641 907 aa10.22□□□□□ -0.77
USP17L28-201ENST00000504543 EDF1O60869 148 aaKnown RBP10.22□□□□□ -0.77
USP17L28-201ENST00000504543 RNASEH1O60930 286 aaKnown RBP10.22□□□□□ -0.77
USP17L28-201ENST00000504543 GSRP00390 522 aa10.22□□□□□ -0.77
USP17L28-201ENST00000504543 GSTA1P08263 222 aa10.22□□□□□ -0.77
USP17L28-201ENST00000504543 SERPINF2P08697 491 aa10.22□□□□□ -0.77
USP17L28-201ENST00000504543 ATXN1LP0C7T5 689 aaKnown RBP10.22□□□□□ -0.77
USP17L28-201ENST00000504543 TPH1P17752 444 aa10.22□□□□□ -0.77
USP17L28-201ENST00000504543 NDUFV2P19404 249 aa10.22□□□□□ -0.77
USP17L28-201ENST00000504543 CR2P20023 1033 aa10.22□□□□□ -0.77
USP17L28-201ENST00000504543 CTSOP43234 321 aaPredicted RBP10.22□□□□□ -0.77
USP17L28-201ENST00000504543 ARCN1P48444 511 aaKnown RBP10.22□□□□□ -0.77
USP17L28-201ENST00000504543 CSNK1DP48730 415 aa10.22□□□□□ -0.77
USP17L28-201ENST00000504543 FNTBP49356 437 aa10.22□□□□□ -0.77
USP17L28-201ENST00000504543 MAXP61244 160 aa10.22□□□□□ -0.77
USP17L28-201ENST00000504543 NHLH1Q02575 133 aa10.22□□□□□ -0.77
USP17L28-201ENST00000504543 ITKQ08881 620 aa10.22□□□□□ -0.77
USP17L28-201ENST00000504543 NSUN2Q08J23 767 aaKnown RBP eCLIP10.22□□□□□ -0.77
USP17L28-201ENST00000504543 MSLNQ13421 630 aaPredicted RBP10.22□□□□□ -0.77
USP17L28-201ENST00000504543 POU6F1Q14863 301 aa10.22□□□□□ -0.77
USP17L28-201ENST00000504543 DLG2Q15700 870 aa10.22□□□□□ -0.77
USP17L28-201ENST00000504543 MAP7D1Q3KQU3 841 aa10.22□□□□□ -0.77
USP17L28-201ENST00000504543 HSP90AA5PQ58FG0 334 aa10.22□□□□□ -0.77
USP17L28-201ENST00000504543 RALGPS1Q5JS13 557 aa10.22□□□□□ -0.77
USP17L28-201ENST00000504543 ZNF776Q68DI1 518 aaPredicted RBP10.22□□□□□ -0.77
USP17L28-201ENST00000504543 IL31Q6EBC2 164 aa10.22□□□□□ -0.77
USP17L28-201ENST00000504543 ANO7Q6IWH7 933 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms