RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 FASLGP48023 281 aa12.48□□□□□ -0.41
LSM6-204ENST00000504181 GLRBP48167 497 aa12.48□□□□□ -0.41
LSM6-204ENST00000504181 SUOXP51687 545 aa12.48□□□□□ -0.41
LSM6-204ENST00000504181 NDST2P52849 883 aa12.48□□□□□ -0.41
LSM6-204ENST00000504181 GEMIN4P57678 1058 aaKnown RBP12.48□□□□□ -0.41
LSM6-204ENST00000504181 NFATC2Q13469 925 aa12.48□□□□□ -0.41
LSM6-204ENST00000504181 PEX6Q13608 980 aa12.48□□□□□ -0.41
LSM6-204ENST00000504181 UGP2Q16851 508 aa12.48□□□□□ -0.41
LSM6-204ENST00000504181 SMTNL2Q2TAL5 461 aa12.48□□□□□ -0.41
LSM6-204ENST00000504181 ARTNQ5T4W7 220 aa12.48□□□□□ -0.41
LSM6-204ENST00000504181 ERAP2Q6P179 960 aa12.48□□□□□ -0.41
LSM6-204ENST00000504181 TMEM110Q86TL2 294 aa12.48□□□□□ -0.41
LSM6-204ENST00000504181 SYVN1Q86TM6 617 aa12.48□□□□□ -0.41
LSM6-204ENST00000504181 ZNF295-AS1Q8N0V1 137 aa12.48□□□□□ -0.41
LSM6-204ENST00000504181 INPP5DQ92835 1189 aa12.48□□□□□ -0.41
LSM6-204ENST00000504181 BARD1Q99728 777 aaKnown RBP12.48□□□□□ -0.41
LSM6-204ENST00000504181 NCAPGQ9BPX3 1015 aa12.48□□□□□ -0.41
LSM6-204ENST00000504181 TTYH3Q9C0H2 523 aa12.48□□□□□ -0.41
LSM6-204ENST00000504181 AKIRIN1Q9H9L7 192 aaPredicted RBP12.48□□□□□ -0.41
LSM6-204ENST00000504181 MAPK8IP1Q9UQF2 711 aa12.48□□□□□ -0.41
LSM6-204ENST00000504181 KLF2Q9Y5W3 355 aaPredicted RBP12.48□□□□□ -0.41
LSM6-204ENST00000504181 SSU72P8A0A1W2PR75 194 aa12.47□□□□□ -0.41
LSM6-204ENST00000504181 HSF2BPO75031 334 aa12.47□□□□□ -0.41
LSM6-204ENST00000504181 FAM155BO75949 473 aa12.47□□□□□ -0.41
LSM6-204ENST00000504181 TMCC1O94876 653 aa12.47□□□□□ -0.41
LSM6-204ENST00000504181 MT-ND3P03897 115 aa12.47□□□□□ -0.41
LSM6-204ENST00000504181 PLEKP08567 350 aaPredicted RBP12.47□□□□□ -0.41
LSM6-204ENST00000504181 TFE3P19532 575 aaPredicted RBP12.47□□□□□ -0.41
LSM6-204ENST00000504181 ADCY8P40145 1251 aa12.47□□□□□ -0.41
LSM6-204ENST00000504181 SEPHS1P49903 392 aa12.47□□□□□ -0.41
LSM6-204ENST00000504181 GFERP55789 205 aa12.47□□□□□ -0.41
LSM6-204ENST00000504181 MCCD1P59942 119 aaPredicted RBP12.47□□□□□ -0.41
LSM6-204ENST00000504181 BRMS1LQ5PSV4 323 aa12.47□□□□□ -0.41
LSM6-204ENST00000504181 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.47□□□□□ -0.41
LSM6-204ENST00000504181 PNCKQ6P2M8 343 aa12.47□□□□□ -0.41
LSM6-204ENST00000504181 PPM1KQ8N3J5 372 aa12.47□□□□□ -0.41
LSM6-204ENST00000504181 STK32AQ8WU08 396 aa12.47□□□□□ -0.41
LSM6-204ENST00000504181 EXOC2Q96KP1 924 aa12.47□□□□□ -0.41
LSM6-204ENST00000504181 SMAD5Q99717 465 aaKnown RBP12.47□□□□□ -0.41
LSM6-204ENST00000504181 ZYG11BQ9C0D3 744 aa12.47□□□□□ -0.41
LSM6-204ENST00000504181 AGPAT4Q9NRZ5 378 aa12.47□□□□□ -0.41
LSM6-204ENST00000504181 NDFIP2Q9NV92 336 aa12.47□□□□□ -0.41
LSM6-204ENST00000504181 USP25Q9UHP3 1055 aa12.47□□□□□ -0.41
LSM6-204ENST00000504181 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.47□□□□□ -0.41
LSM6-204ENST00000504181 PCM1Q15154 2024 aa12.47□□□□□ -0.41
LSM6-204ENST00000504181 SPTBP11277 2137 aa12.46□□□□□ -0.41
LSM6-204ENST00000504181 MN1Q10571 1320 aaPredicted RBP12.46□□□□□ -0.41
LSM6-204ENST00000504181 GOLGA6L3A6NEY3 463 aa12.46□□□□□ -0.41
LSM6-204ENST00000504181 RASA4BC9J798 803 aa12.46□□□□□ -0.41
LSM6-204ENST00000504181 RASA4O43374 803 aa12.46□□□□□ -0.41
LSM6-204ENST00000504181 DAB1O75553 588 aa12.46□□□□□ -0.41
LSM6-204ENST00000504181 TMEM63AO94886 807 aa12.46□□□□□ -0.41
LSM6-204ENST00000504181 TIAF1O95411 115 aa12.46□□□□□ -0.41
LSM6-204ENST00000504181 GLI1P08151 1106 aa12.46□□□□□ -0.41
LSM6-204ENST00000504181 ANKRD34CP0C6C1 535 aa12.46□□□□□ -0.41
LSM6-204ENST00000504181 ELFN1P0C7U0 828 aa12.46□□□□□ -0.41
LSM6-204ENST00000504181 CD99P14209 185 aa12.46□□□□□ -0.41
LSM6-204ENST00000504181 GM2AP17900 193 aa12.46□□□□□ -0.41
LSM6-204ENST00000504181 HTR1EP28566 365 aa12.46□□□□□ -0.41
LSM6-204ENST00000504181 ERCC5P28715 1186 aaPredicted RBP12.46□□□□□ -0.41
LSM6-204ENST00000504181 POLD2P49005 469 aa12.46□□□□□ -0.41
LSM6-204ENST00000504181 CXCR3P49682 368 aa12.46□□□□□ -0.41
LSM6-204ENST00000504181 RHOAP61586 193 aa12.46□□□□□ -0.41
LSM6-204ENST00000504181 RPS15P62841 145 aaKnown RBP12.46□□□□□ -0.41
LSM6-204ENST00000504181 HHEXQ03014 270 aa12.46□□□□□ -0.41
LSM6-204ENST00000504181 RALGDSQ12967 914 aa12.46□□□□□ -0.41
LSM6-204ENST00000504181 PDCLQ13371 301 aa12.46□□□□□ -0.41
LSM6-204ENST00000504181 CRB2Q5IJ48 1285 aa12.46□□□□□ -0.41
LSM6-204ENST00000504181 HGSNATQ68CP4 663 aa12.46□□□□□ -0.41
LSM6-204ENST00000504181 KCNMB4Q86W47 210 aa12.46□□□□□ -0.41
LSM6-204ENST00000504181 ZSWIM9Q86XI8 627 aa12.46□□□□□ -0.41
LSM6-204ENST00000504181 LINC00301Q8NCQ3 95 aa12.46□□□□□ -0.41
LSM6-204ENST00000504181 GPR87Q9BY21 358 aa12.46□□□□□ -0.41
LSM6-204ENST00000504181 FRMD8Q9BZ67 464 aaPredicted RBP12.46□□□□□ -0.41
LSM6-204ENST00000504181 CHST11Q9NPF2 352 aa12.46□□□□□ -0.41
LSM6-204ENST00000504181 PHPT1Q9NRX4 125 aaPredicted RBP12.46□□□□□ -0.41
LSM6-204ENST00000504181 ASNSD1Q9NWL6 643 aa12.46□□□□□ -0.41
LSM6-204ENST00000504181 HPCAL4Q9UM19 191 aa12.46□□□□□ -0.41
LSM6-204ENST00000504181 ATP8A1Q9Y2Q0 1164 aa12.46□□□□□ -0.41
LSM6-204ENST00000504181 MFHAS1Q9Y4C4 1052 aa12.46□□□□□ -0.41
LSM6-204ENST00000504181 CXorf51AA0A1B0GTR3 108 aa12.45□□□□□ -0.42
LSM6-204ENST00000504181 A0A1B0GUH1 482 aa12.45□□□□□ -0.42
LSM6-204ENST00000504181 TSPAN11A1L157 253 aa12.45□□□□□ -0.42
LSM6-204ENST00000504181 E2F3O00716 465 aa12.45□□□□□ -0.42
LSM6-204ENST00000504181 THAP12O43422 761 aa12.45□□□□□ -0.42
LSM6-204ENST00000504181 EML2O95834 649 aa12.45□□□□□ -0.42
LSM6-204ENST00000504181 F9P00740 461 aa12.45□□□□□ -0.42
LSM6-204ENST00000504181 EPB41P11171 864 aaKnown RBP12.45□□□□□ -0.42
LSM6-204ENST00000504181 CAPN3P20807 821 aa12.45□□□□□ -0.42
LSM6-204ENST00000504181 SSTR2P30874 369 aa12.45□□□□□ -0.42
LSM6-204ENST00000504181 ETFBP38117 255 aa12.45□□□□□ -0.42
LSM6-204ENST00000504181 SULT1E1P49888 294 aa12.45□□□□□ -0.42
LSM6-204ENST00000504181 LAMB3Q13751 1172 aa12.45□□□□□ -0.42
LSM6-204ENST00000504181 IL11RAQ14626 422 aa12.45□□□□□ -0.42
LSM6-204ENST00000504181 KYNUQ16719 465 aa12.45□□□□□ -0.42
LSM6-204ENST00000504181 VWA2Q5GFL6 755 aa12.45□□□□□ -0.42
LSM6-204ENST00000504181 CFAP58Q5T655 872 aa12.45□□□□□ -0.42
LSM6-204ENST00000504181 LIPIQ6XZB0 460 aa12.45□□□□□ -0.42
LSM6-204ENST00000504181 FAM183BPQ6ZVS7 135 aa12.45□□□□□ -0.42
LSM6-204ENST00000504181 CEP57L1Q8IYX8 460 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms