RNA–Protein interactions for RNA: ENST00000504173.1

NUP54-203, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-203ENST00000504173 MMP12P39900 470 aa10.05□□□□□ -0.8
NUP54-203ENST00000504173 ADCY8P40145 1251 aa10.05□□□□□ -0.8
NUP54-203ENST00000504173 CHRNA4P43681 627 aa10.05□□□□□ -0.8
NUP54-203ENST00000504173 KCNC4Q03721 635 aa10.05□□□□□ -0.8
NUP54-203ENST00000504173 RALGDSQ12967 914 aa10.05□□□□□ -0.8
NUP54-203ENST00000504173 OLIG2Q13516 323 aa10.05□□□□□ -0.8
NUP54-203ENST00000504173 ARHGEF7Q14155 803 aa10.05□□□□□ -0.8
NUP54-203ENST00000504173 SLC1A5Q15758 541 aa10.05□□□□□ -0.8
NUP54-203ENST00000504173 UAP1L1Q3KQV9 507 aa10.05□□□□□ -0.8
NUP54-203ENST00000504173 TMEM52BQ4KMG9 183 aa10.05□□□□□ -0.8
NUP54-203ENST00000504173 SIRPB2Q5JXA9 342 aa10.05□□□□□ -0.8
NUP54-203ENST00000504173 KIAA0895LQ68EN5 471 aa10.05□□□□□ -0.8
NUP54-203ENST00000504173 KCTD11Q693B1 232 aa10.05□□□□□ -0.8
NUP54-203ENST00000504173 NAPEPLDQ6IQ20 393 aa10.05□□□□□ -0.8
NUP54-203ENST00000504173 KIAA1161Q6NSJ0 714 aa10.05□□□□□ -0.8
NUP54-203ENST00000504173 NEK5Q6P3R8 708 aa10.05□□□□□ -0.8
NUP54-203ENST00000504173 PPP1R21Q6ZMI0 780 aa10.05□□□□□ -0.8
NUP54-203ENST00000504173 DPPA4Q7L190 304 aa10.05□□□□□ -0.8
NUP54-203ENST00000504173 LPCAT2Q7L5N7 544 aa10.05□□□□□ -0.8
NUP54-203ENST00000504173 MAATS1Q7Z4T9 603 aa10.05□□□□□ -0.8
NUP54-203ENST00000504173 CTAGE6Q86UF2 777 aa10.05□□□□□ -0.8
NUP54-203ENST00000504173 CTAGE4Q8IX94 777 aa10.05□□□□□ -0.8
NUP54-203ENST00000504173 DEFB119Q8N690 84 aa10.05□□□□□ -0.8
NUP54-203ENST00000504173 CADM4Q8NFZ8 388 aa10.05□□□□□ -0.8
NUP54-203ENST00000504173 ADAMTS14Q8WXS8 1223 aa10.05□□□□□ -0.8
NUP54-203ENST00000504173 SNX19Q92543 992 aa10.05□□□□□ -0.8
NUP54-203ENST00000504173 SCRN2Q96FV2 425 aa10.05□□□□□ -0.8
NUP54-203ENST00000504173 HSPA12BQ96MM6 686 aa10.05□□□□□ -0.8
NUP54-203ENST00000504173 SMIM14Q96QK8 99 aa10.05□□□□□ -0.8
NUP54-203ENST00000504173 MCCC1Q96RQ3 725 aaPredicted RBP10.05□□□□□ -0.8
NUP54-203ENST00000504173 TRIM51Q9BSJ1 452 aa10.05□□□□□ -0.8
NUP54-203ENST00000504173 WRAP53Q9BUR4 548 aaKnown RBP10.05□□□□□ -0.8
NUP54-203ENST00000504173 PCED1AQ9H1Q7 454 aa10.05□□□□□ -0.8
NUP54-203ENST00000504173 C6orf106Q9H6K1 298 aaPredicted RBP10.05□□□□□ -0.8
NUP54-203ENST00000504173 EIF2B3Q9NR50 452 aaKnown RBP10.05□□□□□ -0.8
NUP54-203ENST00000504173 PPIL1Q9Y3C6 166 aa10.05□□□□□ -0.8
NUP54-203ENST00000504173 COL6A6A6NMZ7 2263 aa10.05□□□□□ -0.8
NUP54-203ENST00000504173 A0A1W2PQU0 124 aa10.04□□□□□ -0.8
NUP54-203ENST00000504173 FAM187AA6NFU0 413 aa10.04□□□□□ -0.8
NUP54-203ENST00000504173 MEI4A8MW99 385 aa10.04□□□□□ -0.8
NUP54-203ENST00000504173 RAD51CO43502 376 aa10.04□□□□□ -0.8
NUP54-203ENST00000504173 MMP20O60882 483 aa10.04□□□□□ -0.8
NUP54-203ENST00000504173 SLC4A1P02730 911 aa10.04□□□□□ -0.8
NUP54-203ENST00000504173 ELFN1P0C7U0 828 aa10.04□□□□□ -0.8
NUP54-203ENST00000504173 PIRTP0C851 137 aa10.04□□□□□ -0.8
NUP54-203ENST00000504173 MAT2AP31153 395 aaKnown RBP10.04□□□□□ -0.8
NUP54-203ENST00000504173 HNF1BP35680 557 aa10.04□□□□□ -0.8
NUP54-203ENST00000504173 DHPSP49366 369 aaPredicted RBP10.04□□□□□ -0.8
NUP54-203ENST00000504173 LIG3P49916 1009 aa10.04□□□□□ -0.8
NUP54-203ENST00000504173 CCR5P51681 352 aa10.04□□□□□ -0.8
NUP54-203ENST00000504173 PPP2CBP62714 309 aa10.04□□□□□ -0.8
NUP54-203ENST00000504173 RPS21P63220 83 aaKnown RBP10.04□□□□□ -0.8
NUP54-203ENST00000504173 PPP2CAP67775 309 aa10.04□□□□□ -0.8
NUP54-203ENST00000504173 MRPS25P82663 173 aaKnown RBP10.04□□□□□ -0.8
NUP54-203ENST00000504173 PTPRRQ15256 657 aa10.04□□□□□ -0.8
NUP54-203ENST00000504173 CNGA3Q16281 694 aa10.04□□□□□ -0.8
NUP54-203ENST00000504173 SEL1L3Q68CR1 1132 aa10.04□□□□□ -0.8
NUP54-203ENST00000504173 PMS2CLQ68D20 193 aa10.04□□□□□ -0.8
NUP54-203ENST00000504173 C8orf74Q6P047 294 aa10.04□□□□□ -0.8
NUP54-203ENST00000504173 RANBP10Q6VN20 620 aa10.04□□□□□ -0.8
NUP54-203ENST00000504173 ARMCX6Q7L4S7 300 aa10.04□□□□□ -0.8
NUP54-203ENST00000504173 LINC00523Q86TU6 105 aa10.04□□□□□ -0.8
NUP54-203ENST00000504173 TSPAN33Q86UF1 283 aa10.04□□□□□ -0.8
NUP54-203ENST00000504173 TRIM69Q86WT6 500 aa10.04□□□□□ -0.8
NUP54-203ENST00000504173 HORMAD1Q86X24 394 aa10.04□□□□□ -0.8
NUP54-203ENST00000504173 FOXJ1Q92949 421 aa10.04□□□□□ -0.8
NUP54-203ENST00000504173 SRPK1Q96SB4 655 aaKnown RBP10.04□□□□□ -0.8
NUP54-203ENST00000504173 CARD6Q9BX69 1037 aa10.04□□□□□ -0.8
NUP54-203ENST00000504173 TPX2Q9ULW0 747 aaKnown RBP10.04□□□□□ -0.8
NUP54-203ENST00000504173 ZFR2Q9UPR6 939 aaKnown RBP10.04□□□□□ -0.8
NUP54-203ENST00000504173 ABCA7Q8IZY2 2146 aa10.03□□□□□ -0.8
NUP54-203ENST00000504173 C1orf232A0A0U1RR37 186 aa10.03□□□□□ -0.8
NUP54-203ENST00000504173 IGLON5A6NGN9 336 aa10.03□□□□□ -0.8
NUP54-203ENST00000504173 METTL12A8MUP2 240 aa10.03□□□□□ -0.8
NUP54-203ENST00000504173 EFCAB8A8MWE9 144 aa10.03□□□□□ -0.8
NUP54-203ENST00000504173 LZTS3O60299 673 aaPredicted RBP10.03□□□□□ -0.8
NUP54-203ENST00000504173 TM7SF2O76062 418 aa10.03□□□□□ -0.8
NUP54-203ENST00000504173 SUN1O94901 812 aa10.03□□□□□ -0.8
NUP54-203ENST00000504173 HEXIM1O94992 359 aaKnown RBP10.03□□□□□ -0.8
NUP54-203ENST00000504173 C6P13671 934 aa10.03□□□□□ -0.8
NUP54-203ENST00000504173 ZNF30P17039 623 aa10.03□□□□□ -0.8
NUP54-203ENST00000504173 TPSB2P20231 275 aa10.03□□□□□ -0.8
NUP54-203ENST00000504173 LHCGRP22888 699 aa10.03□□□□□ -0.8
NUP54-203ENST00000504173 ABCG1P45844 678 aa10.03□□□□□ -0.8
NUP54-203ENST00000504173 IRX4P78413 519 aa10.03□□□□□ -0.8
NUP54-203ENST00000504173 SARNPP82979 210 aaKnown RBP10.03□□□□□ -0.8
NUP54-203ENST00000504173 SGCGQ13326 291 aa10.03□□□□□ -0.8
NUP54-203ENST00000504173 KCNJ11Q14654 390 aa10.03□□□□□ -0.8
NUP54-203ENST00000504173 ACOX1Q15067 660 aa10.03□□□□□ -0.8
NUP54-203ENST00000504173 TPSAB1Q15661 275 aa10.03□□□□□ -0.8
NUP54-203ENST00000504173 ZNF284Q2VY69 593 aa10.03□□□□□ -0.8
NUP54-203ENST00000504173 TMEM259Q4ZIN3 620 aa10.03□□□□□ -0.8
NUP54-203ENST00000504173 SETMARQ53H47 684 aaPredicted RBP10.03□□□□□ -0.8
NUP54-203ENST00000504173 SPDYCQ5MJ68 293 aa10.03□□□□□ -0.8
NUP54-203ENST00000504173 LYSMD4Q5XG99 296 aa10.03□□□□□ -0.8
NUP54-203ENST00000504173 LRRC66Q68CR7 880 aa10.03□□□□□ -0.8
NUP54-203ENST00000504173 DENND2CQ68D51 928 aa10.03□□□□□ -0.8
NUP54-203ENST00000504173 CRTC1Q6UUV9 634 aa10.03□□□□□ -0.8
NUP54-203ENST00000504173 LIPIQ6XZB0 460 aa10.03□□□□□ -0.8
NUP54-203ENST00000504173 PCGF5Q86SE9 256 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms