RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 SNAP91O60641 907 aa14.97□□□□□ -0.01
SNF8-203ENST00000504000 CLASP2O75122 1294 aaKnown RBP14.97□□□□□ -0.01
SNF8-203ENST00000504000 LBPP18428 481 aa14.97□□□□□ -0.01
SNF8-203ENST00000504000 CPT1AP50416 773 aa14.97□□□□□ -0.01
SNF8-203ENST00000504000 KIF19Q2TAC6 998 aa14.97□□□□□ -0.01
SNF8-203ENST00000504000 TTC33Q6PID6 262 aaPredicted RBP14.97□□□□□ -0.01
SNF8-203ENST00000504000 BLOC1S3Q6QNY0 202 aa14.97□□□□□ -0.01
SNF8-203ENST00000504000 PLEKHH3Q7Z736 793 aa14.97□□□□□ -0.01
SNF8-203ENST00000504000 CBR4Q8N4T8 237 aa14.97□□□□□ -0.01
SNF8-203ENST00000504000 FNDC8Q8TC99 324 aa14.97□□□□□ -0.01
SNF8-203ENST00000504000 GRIN3AQ8TCU5 1115 aa14.97□□□□□ -0.01
SNF8-203ENST00000504000 SEPT8Q92599 483 aa14.97□□□□□ -0.01
SNF8-203ENST00000504000 SLC10A4Q96EP9 437 aa14.97□□□□□ -0.01
SNF8-203ENST00000504000 GAD1Q99259 594 aa14.97□□□□□ -0.01
SNF8-203ENST00000504000 HIPK3Q9H422 1215 aa14.97□□□□□ -0.01
SNF8-203ENST00000504000 FBRSL1Q9HCM7 1045 aaKnown RBP14.97□□□□□ -0.01
SNF8-203ENST00000504000 PCDHA9Q9Y5H5 950 aa14.97□□□□□ -0.01
SNF8-203ENST00000504000 NYNRINQ9P2P1 1898 aaKnown RBP14.97□□□□□ -0.01
SNF8-203ENST00000504000 PATJQ8NI35 1801 aa14.97□□□□□ -0.01
SNF8-203ENST00000504000 LOC285095A0A1B0GVY8 99 aa14.97□□□□□ -0.01
SNF8-203ENST00000504000 ARSAP15289 507 aa14.97□□□□□ -0.01
SNF8-203ENST00000504000 USP50Q70EL3 339 aaPredicted RBP14.97□□□□□ -0.01
SNF8-203ENST00000504000 RPS27LQ71UM5 84 aaKnown RBP14.97□□□□□ -0.01
SNF8-203ENST00000504000 SPATA19Q7Z5L4 167 aa14.97□□□□□ -0.01
SNF8-203ENST00000504000 ANKRD23Q86SG2 305 aa14.97□□□□□ -0.01
SNF8-203ENST00000504000 ZNF354CQ86Y25 554 aa14.97□□□□□ -0.01
SNF8-203ENST00000504000 EPHX4Q8IUS5 362 aa14.97□□□□□ -0.01
SNF8-203ENST00000504000 DCP1BQ8IZD4 617 aaKnown RBP14.97□□□□□ -0.01
SNF8-203ENST00000504000 ADGRG5Q8IZF4 528 aa14.97□□□□□ -0.01
SNF8-203ENST00000504000 LEMD2Q8NC56 503 aa14.97□□□□□ -0.01
SNF8-203ENST00000504000 PNPT1Q8TCS8 783 aaKnown RBP14.97□□□□□ -0.01
SNF8-203ENST00000504000 TWIST2Q8WVJ9 160 aa14.97□□□□□ -0.01
SNF8-203ENST00000504000 PTERQ96BW5 349 aa14.97□□□□□ -0.01
SNF8-203ENST00000504000 ISOC1Q96CN7 298 aa14.97□□□□□ -0.01
SNF8-203ENST00000504000 LRRC58Q96CX6 371 aa14.97□□□□□ -0.01
SNF8-203ENST00000504000 SERPINB11Q96P15 392 aa14.97□□□□□ -0.01
SNF8-203ENST00000504000 NOL6Q9H6R4 1146 aaKnown RBP14.97□□□□□ -0.01
SNF8-203ENST00000504000 RGS18Q9NS28 235 aa14.97□□□□□ -0.01
SNF8-203ENST00000504000 IRAK4Q9NWZ3 460 aa14.97□□□□□ -0.01
SNF8-203ENST00000504000 Q9Y3F1 56 aa14.97□□□□□ -0.01
SNF8-203ENST00000504000 HS3ST4Q9Y661 456 aa14.97□□□□□ -0.01
SNF8-203ENST00000504000 ATP6AP2A0A1C7CYW4 349 aa14.96□□□□□ -0.01
SNF8-203ENST00000504000 A0A1W2PP18 115 aa14.96□□□□□ -0.01
SNF8-203ENST00000504000 SH3PXD2BA1X283 911 aa14.96□□□□□ -0.01
SNF8-203ENST00000504000 ARL5CA6NH57 179 aa14.96□□□□□ -0.01
SNF8-203ENST00000504000 M0QZQ0 153 aa14.96□□□□□ -0.01
SNF8-203ENST00000504000 ACOX3O15254 700 aa14.96□□□□□ -0.01
SNF8-203ENST00000504000 ATP6AP2O75787 350 aa14.96□□□□□ -0.01
SNF8-203ENST00000504000 NPPAP01160 153 aa14.96□□□□□ -0.01
SNF8-203ENST00000504000 MMP2P08253 660 aa14.96□□□□□ -0.01
SNF8-203ENST00000504000 SLC2A3P11169 496 aa14.96□□□□□ -0.01
SNF8-203ENST00000504000 RHOQP17081 205 aa14.96□□□□□ -0.01
SNF8-203ENST00000504000 CAPN3P20807 821 aa14.96□□□□□ -0.01
SNF8-203ENST00000504000 PRAMEP78395 509 aa14.96□□□□□ -0.01
SNF8-203ENST00000504000 PLOD1Q02809 727 aaPredicted RBP14.96□□□□□ -0.01
SNF8-203ENST00000504000 FXNQ16595 210 aa14.96□□□□□ -0.01
SNF8-203ENST00000504000 FSCN1Q16658 493 aaKnown RBP14.96□□□□□ -0.01
SNF8-203ENST00000504000 MARC1Q5VT66 337 aa14.96□□□□□ -0.01
SNF8-203ENST00000504000 MRPL10Q7Z7H8 261 aaKnown RBP14.96□□□□□ -0.01
SNF8-203ENST00000504000 PATL1Q86TB9 770 aaKnown RBP14.96□□□□□ -0.01
SNF8-203ENST00000504000 TLK2Q86UE8 772 aa14.96□□□□□ -0.01
SNF8-203ENST00000504000 NPLOC4Q8TAT6 608 aa14.96□□□□□ -0.01
SNF8-203ENST00000504000 CASP10Q92851 521 aa14.96□□□□□ -0.01
SNF8-203ENST00000504000 HDAC10Q969S8 669 aa14.96□□□□□ -0.01
SNF8-203ENST00000504000 MS4A4AQ96JQ5 239 aa14.96□□□□□ -0.01
SNF8-203ENST00000504000 TUBA1CQ9BQE3 449 aa14.96□□□□□ -0.01
SNF8-203ENST00000504000 SLC39A3Q9BRY0 314 aa14.96□□□□□ -0.01
SNF8-203ENST00000504000 CMTM6Q9NX76 183 aa14.96□□□□□ -0.01
SNF8-203ENST00000504000 MIOSQ9NXC5 875 aa14.96□□□□□ -0.01
SNF8-203ENST00000504000 LMCD1Q9NZU5 365 aa14.96□□□□□ -0.01
SNF8-203ENST00000504000 RGS17Q9UGC6 210 aaPredicted RBP14.96□□□□□ -0.01
SNF8-203ENST00000504000 ZNF639Q9UID6 485 aa14.96□□□□□ -0.01
SNF8-203ENST00000504000 GRXCR2A6NFK2 248 aa14.95□□□□□ -0.02
SNF8-203ENST00000504000 MEIS3P2A8K0S8 358 aa14.95□□□□□ -0.02
SNF8-203ENST00000504000 NR5A2O00482 541 aa14.95□□□□□ -0.02
SNF8-203ENST00000504000 TNFRSF10BO14763 440 aa14.95□□□□□ -0.02
SNF8-203ENST00000504000 LDB2O43679 373 aa14.95□□□□□ -0.02
SNF8-203ENST00000504000 EPOP01588 193 aa14.95□□□□□ -0.02
SNF8-203ENST00000504000 PRR35P0CG20 571 aa14.95□□□□□ -0.02
SNF8-203ENST00000504000 MTHFD2P13995 350 aa14.95□□□□□ -0.02
SNF8-203ENST00000504000 GFAPP14136 432 aa14.95□□□□□ -0.02
SNF8-203ENST00000504000 OGNP20774 298 aaKnown RBP14.95□□□□□ -0.02
SNF8-203ENST00000504000 DCKP27707 260 aa14.95□□□□□ -0.02
SNF8-203ENST00000504000 PCSK7Q16549 785 aa14.95□□□□□ -0.02
SNF8-203ENST00000504000 AASDHQ4L235 1098 aaPredicted RBP14.95□□□□□ -0.02
SNF8-203ENST00000504000 MRNIPQ6NTE8 343 aa14.95□□□□□ -0.02
SNF8-203ENST00000504000 ABRAXAS1Q6UWZ7 409 aa14.95□□□□□ -0.02
SNF8-203ENST00000504000 EFL1Q7Z2Z2 1120 aaKnown RBP14.95□□□□□ -0.02
SNF8-203ENST00000504000 TBC1D21Q8IYX1 336 aa14.95□□□□□ -0.02
SNF8-203ENST00000504000 PTGR2Q8N8N7 351 aaPredicted RBP14.95□□□□□ -0.02
SNF8-203ENST00000504000 ATOH8Q96SQ7 321 aa14.95□□□□□ -0.02
SNF8-203ENST00000504000 MID1IP1Q9NPA3 183 aa14.95□□□□□ -0.02
SNF8-203ENST00000504000 DNAAF2Q9NVR5 837 aaKnown RBP14.95□□□□□ -0.02
SNF8-203ENST00000504000 TMEM248Q9NWD8 314 aa14.95□□□□□ -0.02
SNF8-203ENST00000504000 CHCHD3Q9NX63 227 aaKnown RBP14.95□□□□□ -0.02
SNF8-203ENST00000504000 GPR45Q9Y5Y3 372 aa14.95□□□□□ -0.02
SNF8-203ENST00000504000 RNF103-CHMP3A0A140T963 221 aa14.95□□□□□ -0.02
SNF8-203ENST00000504000 PIP5K1BO14986 540 aa14.95□□□□□ -0.02
SNF8-203ENST00000504000 ARPC2O15144 300 aa14.95□□□□□ -0.02
SNF8-203ENST00000504000 ZNF37AP17032 561 aaPredicted RBP14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms