RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 LGR4Q9BXB1 951 aa6.1□□□□□ -1.43
LSM3P4-201ENST00000502948 FOXP3Q9BZS1 431 aa6.1□□□□□ -1.43
LSM3P4-201ENST00000502948 SPRY4Q9C004 299 aa6.1□□□□□ -1.43
LSM3P4-201ENST00000502948 SLC25A18Q9H1K4 315 aa6.1□□□□□ -1.43
LSM3P4-201ENST00000502948 TRIT1Q9H3H1 467 aaKnown RBP6.1□□□□□ -1.43
LSM3P4-201ENST00000502948 EPB41L1Q9H4G0 881 aa6.1□□□□□ -1.43
LSM3P4-201ENST00000502948 SP110Q9HB58 689 aa6.1□□□□□ -1.43
LSM3P4-201ENST00000502948 CYP4F12Q9HCS2 524 aa6.1□□□□□ -1.43
LSM3P4-201ENST00000502948 MRPL40Q9NQ50 206 aaKnown RBP6.1□□□□□ -1.43
LSM3P4-201ENST00000502948 SPATS2LQ9NUQ6 558 aaKnown RBP6.1□□□□□ -1.43
LSM3P4-201ENST00000502948 ANO10Q9NW15 660 aa6.1□□□□□ -1.43
LSM3P4-201ENST00000502948 AIPL1Q9NZN9 384 aa6.1□□□□□ -1.43
LSM3P4-201ENST00000502948 SIRPGQ9P1W8 387 aa6.1□□□□□ -1.43
LSM3P4-201ENST00000502948 VPS18Q9P253 973 aa6.1□□□□□ -1.43
LSM3P4-201ENST00000502948 B4GALT6Q9UBX8 382 aa6.1□□□□□ -1.43
LSM3P4-201ENST00000502948 PISDQ9UG56 409 aa6.1□□□□□ -1.43
LSM3P4-201ENST00000502948 RPL26L1Q9UNX3 145 aaKnown RBP6.1□□□□□ -1.43
LSM3P4-201ENST00000502948 IGHV1OR21-1A0A087WYE8 117 aa6.09□□□□□ -1.43
LSM3P4-201ENST00000502948 CLEC18AA5D8T8 446 aa6.09□□□□□ -1.43
LSM3P4-201ENST00000502948 RGSL1A5PLK6 1076 aa6.09□□□□□ -1.43
LSM3P4-201ENST00000502948 OR5K4A6NMS3 321 aa6.09□□□□□ -1.43
LSM3P4-201ENST00000502948 RHPN2P1A8MT19 583 aa6.09□□□□□ -1.43
LSM3P4-201ENST00000502948 GPR89AB7ZAQ6 455 aa6.09□□□□□ -1.43
LSM3P4-201ENST00000502948 TOX3O15405 576 aaPredicted RBP6.09□□□□□ -1.43
LSM3P4-201ENST00000502948 ARHGAP6O43182 974 aa6.09□□□□□ -1.43
LSM3P4-201ENST00000502948 DAPK3O43293 454 aa6.09□□□□□ -1.43
LSM3P4-201ENST00000502948 MAFKO60675 156 aa6.09□□□□□ -1.43
LSM3P4-201ENST00000502948 PGLSO95336 258 aa6.09□□□□□ -1.43
LSM3P4-201ENST00000502948 ZIC2O95409 532 aaPredicted RBP6.09□□□□□ -1.43
LSM3P4-201ENST00000502948 ECEL1O95672 775 aa6.09□□□□□ -1.43
LSM3P4-201ENST00000502948 ANKRD34CP0C6C1 535 aa6.09□□□□□ -1.43
LSM3P4-201ENST00000502948 GPR89BP0CG08 455 aa6.09□□□□□ -1.43
LSM3P4-201ENST00000502948 FGF3P11487 239 aaPredicted RBP6.09□□□□□ -1.43
LSM3P4-201ENST00000502948 HGFP14210 728 aa6.09□□□□□ -1.43
LSM3P4-201ENST00000502948 ITIH1P19827 911 aa6.09□□□□□ -1.43
LSM3P4-201ENST00000502948 PSMA2P25787 234 aa6.09□□□□□ -1.43
LSM3P4-201ENST00000502948 MAP4P27816 1152 aaKnown RBP6.09□□□□□ -1.43
LSM3P4-201ENST00000502948 MIPP30301 263 aa6.09□□□□□ -1.43
LSM3P4-201ENST00000502948 UGT1A3P35503 534 aa6.09□□□□□ -1.43
LSM3P4-201ENST00000502948 ARL4AP40617 200 aa6.09□□□□□ -1.43
LSM3P4-201ENST00000502948 ETV5P41161 510 aa6.09□□□□□ -1.43
LSM3P4-201ENST00000502948 SCNN1BP51168 640 aa6.09□□□□□ -1.43
LSM3P4-201ENST00000502948 ARSDP51689 593 aa6.09□□□□□ -1.43
LSM3P4-201ENST00000502948 CLCNKAP51800 687 aa6.09□□□□□ -1.43
LSM3P4-201ENST00000502948 EPHA4P54764 986 aa6.09□□□□□ -1.43
LSM3P4-201ENST00000502948 SLC10A7Q0GE19 358 aa6.09□□□□□ -1.43
LSM3P4-201ENST00000502948 PIGHQ14442 188 aaPredicted RBP6.09□□□□□ -1.43
LSM3P4-201ENST00000502948 C16orf72Q14CZ0 275 aa6.09□□□□□ -1.43
LSM3P4-201ENST00000502948 NCAPHQ15003 741 aa6.09□□□□□ -1.43
LSM3P4-201ENST00000502948 ACOX1Q15067 660 aa6.09□□□□□ -1.43
LSM3P4-201ENST00000502948 TGIF1Q15583 401 aa6.09□□□□□ -1.43
LSM3P4-201ENST00000502948 TBR1Q16650 682 aa6.09□□□□□ -1.43
LSM3P4-201ENST00000502948 CA9Q16790 459 aa6.09□□□□□ -1.43
LSM3P4-201ENST00000502948 MAP9Q49MG5 647 aa6.09□□□□□ -1.43
LSM3P4-201ENST00000502948 FIGNQ5HY92 759 aa6.09□□□□□ -1.43
LSM3P4-201ENST00000502948 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.09□□□□□ -1.43
LSM3P4-201ENST00000502948 BORAQ6PGQ7 559 aa6.09□□□□□ -1.43
LSM3P4-201ENST00000502948 CLEC18BQ6UXF7 455 aa6.09□□□□□ -1.43
LSM3P4-201ENST00000502948 USP45Q70EL2 814 aa6.09□□□□□ -1.43
LSM3P4-201ENST00000502948 TMPRSS9Q7Z410 1059 aa6.09□□□□□ -1.43
LSM3P4-201ENST00000502948 ARHGAP22Q7Z5H3 698 aa6.09□□□□□ -1.43
LSM3P4-201ENST00000502948 POLNQ7Z5Q5 900 aa6.09□□□□□ -1.43
LSM3P4-201ENST00000502948 PHLDB2Q86SQ0 1253 aa6.09□□□□□ -1.43
LSM3P4-201ENST00000502948 HEATR4Q86WZ0 1026 aa6.09□□□□□ -1.43
LSM3P4-201ENST00000502948 JAMLQ86YT9 394 aa6.09□□□□□ -1.43
LSM3P4-201ENST00000502948 NRSN1Q8IZ57 195 aa6.09□□□□□ -1.43
LSM3P4-201ENST00000502948 NPWQ8N729 165 aa6.09□□□□□ -1.43
LSM3P4-201ENST00000502948 BMPERQ8N8U9 685 aa6.09□□□□□ -1.43
LSM3P4-201ENST00000502948 CLEC18CQ8NCF0 446 aa6.09□□□□□ -1.43
LSM3P4-201ENST00000502948 CCL4L1Q8NHW4 92 aa6.09□□□□□ -1.43
LSM3P4-201ENST00000502948 ZDHHC1Q8WTX9 485 aa6.09□□□□□ -1.43
LSM3P4-201ENST00000502948 PIH1D2Q8WWB5 315 aa6.09□□□□□ -1.43
LSM3P4-201ENST00000502948 SH3KBP1Q96B97 665 aa6.09□□□□□ -1.43
LSM3P4-201ENST00000502948 COX14Q96I36 57 aa6.09□□□□□ -1.43
LSM3P4-201ENST00000502948 SLC45A3Q96JT2 553 aa6.09□□□□□ -1.43
LSM3P4-201ENST00000502948 NSMCE3Q96MG7 304 aa6.09□□□□□ -1.43
LSM3P4-201ENST00000502948 KCTD15Q96SI1 283 aaPredicted RBP6.09□□□□□ -1.43
LSM3P4-201ENST00000502948 BPIFA3Q9BQP9 254 aa6.09□□□□□ -1.43
LSM3P4-201ENST00000502948 ARHGAP9Q9BRR9 750 aa6.09□□□□□ -1.43
LSM3P4-201ENST00000502948 ISCUQ9H1K1 167 aa6.09□□□□□ -1.43
LSM3P4-201ENST00000502948 HSD3B7Q9H2F3 369 aa6.09□□□□□ -1.43
LSM3P4-201ENST00000502948 SEMA6CQ9H3T2 930 aa6.09□□□□□ -1.43
LSM3P4-201ENST00000502948 DHX35Q9H5Z1 703 aaKnown RBP6.09□□□□□ -1.43
LSM3P4-201ENST00000502948 RMI1Q9H9A7 625 aa6.09□□□□□ -1.43
LSM3P4-201ENST00000502948 UCK1Q9HA47 277 aa6.09□□□□□ -1.43
LSM3P4-201ENST00000502948 CARS2Q9HA77 564 aaKnown RBP6.09□□□□□ -1.43
LSM3P4-201ENST00000502948 SARS2Q9NP81 518 aaKnown RBP6.09□□□□□ -1.43
LSM3P4-201ENST00000502948 FBXO8Q9NRD0 319 aa6.09□□□□□ -1.43
LSM3P4-201ENST00000502948 LMBRD1Q9NUN5 540 aa6.09□□□□□ -1.43
LSM3P4-201ENST00000502948 HAUS2Q9NVX0 235 aa6.09□□□□□ -1.43
LSM3P4-201ENST00000502948 CWC15Q9P013 229 aaKnown RBP6.09□□□□□ -1.43
LSM3P4-201ENST00000502948 FOXJ2Q9P0K8 574 aa6.09□□□□□ -1.43
LSM3P4-201ENST00000502948 TAAR2Q9P1P5 351 aa6.09□□□□□ -1.43
LSM3P4-201ENST00000502948 ANAPC2Q9UJX6 822 aa6.09□□□□□ -1.43
LSM3P4-201ENST00000502948 TMEM184BQ9Y519 407 aaPredicted RBP6.09□□□□□ -1.43
LSM3P4-201ENST00000502948 HEMK1Q9Y5R4 338 aaPredicted RBP6.09□□□□□ -1.43
LSM3P4-201ENST00000502948 ZNF106Q9H2Y7 1883 aaKnown RBP6.09□□□□□ -1.44
LSM3P4-201ENST00000502948 UBR5O95071 2799 aaPredicted RBP6.08□□□□□ -1.44
LSM3P4-201ENST00000502948 A0A0J9YYE9 177 aa6.08□□□□□ -1.44
LSM3P4-201ENST00000502948 GOLGA6L3A6NEY3 463 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms