RNA–Protein interactions for RNA: ENST00000502342.1

SMAD1-203, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-203ENST00000502342 RAD23BP54727 409 aa2.47□□□□□ -2.01
SMAD1-203ENST00000502342 TROAPQ12815 778 aa2.47□□□□□ -2.01
SMAD1-203ENST00000502342 KRT81Q14533 505 aa2.47□□□□□ -2.01
SMAD1-203ENST00000502342 DRAP1Q14919 205 aaPredicted RBP2.47□□□□□ -2.01
SMAD1-203ENST00000502342 KRT24Q2M2I5 525 aa2.47□□□□□ -2.01
SMAD1-203ENST00000502342 DUS1LQ6P1R4 473 aaKnown RBP2.47□□□□□ -2.01
SMAD1-203ENST00000502342 KCTD18Q6PI47 426 aaPredicted RBP2.47□□□□□ -2.01
SMAD1-203ENST00000502342 SLC9B2Q86UD5 537 aa2.47□□□□□ -2.01
SMAD1-203ENST00000502342 TMPRSS12Q86WS5 348 aa2.47□□□□□ -2.01
SMAD1-203ENST00000502342 HEATR4Q86WZ0 1026 aa2.47□□□□□ -2.01
SMAD1-203ENST00000502342 WDR63Q8IWG1 891 aa2.47□□□□□ -2.01
SMAD1-203ENST00000502342 CCDC13Q8IYE1 715 aa2.47□□□□□ -2.01
SMAD1-203ENST00000502342 IL17RCQ8NAC3 791 aa2.47□□□□□ -2.01
SMAD1-203ENST00000502342 DMBX1Q8NFW5 382 aa2.47□□□□□ -2.01
SMAD1-203ENST00000502342 CADM4Q8NFZ8 388 aa2.47□□□□□ -2.01
SMAD1-203ENST00000502342 LRRC8CQ8TDW0 803 aa2.47□□□□□ -2.01
SMAD1-203ENST00000502342 DUSP19Q8WTR2 217 aa2.47□□□□□ -2.01
SMAD1-203ENST00000502342 SLC20A1Q8WUM9 679 aa2.47□□□□□ -2.01
SMAD1-203ENST00000502342 ST8SIA4Q92187 359 aa2.47□□□□□ -2.01
SMAD1-203ENST00000502342 TTC14Q96N46 770 aa2.47□□□□□ -2.01
SMAD1-203ENST00000502342 PCYT2Q99447 389 aa2.47□□□□□ -2.01
SMAD1-203ENST00000502342 MTERF1Q99551 399 aaKnown RBP2.47□□□□□ -2.01
SMAD1-203ENST00000502342 HAUS8Q9BT25 410 aa2.47□□□□□ -2.01
SMAD1-203ENST00000502342 IFIH1Q9BYX4 1025 aaKnown RBP2.47□□□□□ -2.01
SMAD1-203ENST00000502342 PAIP1Q9H074 479 aaKnown RBP2.47□□□□□ -2.01
SMAD1-203ENST00000502342 CSTL1Q9H114 145 aa2.47□□□□□ -2.01
SMAD1-203ENST00000502342 SLC25A18Q9H1K4 315 aa2.47□□□□□ -2.01
SMAD1-203ENST00000502342 PDCL3Q9H2J4 239 aa2.47□□□□□ -2.01
SMAD1-203ENST00000502342 PLEKHA4Q9H4M7 779 aa2.47□□□□□ -2.01
SMAD1-203ENST00000502342 ESRP2Q9H6T0 727 aaKnown RBP2.47□□□□□ -2.01
SMAD1-203ENST00000502342 PPP1R3EQ9H7J1 279 aa2.47□□□□□ -2.01
SMAD1-203ENST00000502342 PRKRIP1Q9H875 184 aaPredicted RBP2.47□□□□□ -2.01
SMAD1-203ENST00000502342 PCDH9Q9HC56 1237 aa2.47□□□□□ -2.01
SMAD1-203ENST00000502342 SAGE1Q9NXZ1 904 aa2.47□□□□□ -2.01
SMAD1-203ENST00000502342 HAO1Q9UJM8 370 aa2.47□□□□□ -2.01
SMAD1-203ENST00000502342 PADI1Q9ULC6 663 aa2.47□□□□□ -2.01
SMAD1-203ENST00000502342 LOXL2Q9Y4K0 774 aa2.47□□□□□ -2.01
SMAD1-203ENST00000502342 GOLGA6L9A6NEM1 432 aa2.46□□□□□ -2.02
SMAD1-203ENST00000502342 FGF17O60258 216 aa2.46□□□□□ -2.02
SMAD1-203ENST00000502342 UMODP07911 640 aa2.46□□□□□ -2.02
SMAD1-203ENST00000502342 CDH1P12830 882 aa2.46□□□□□ -2.02
SMAD1-203ENST00000502342 KRT10P13645 584 aa2.46□□□□□ -2.02
SMAD1-203ENST00000502342 IL7RP16871 459 aa2.46□□□□□ -2.02
SMAD1-203ENST00000502342 MAOAP21397 527 aa2.46□□□□□ -2.02
SMAD1-203ENST00000502342 ARL1P40616 181 aaPredicted RBP2.46□□□□□ -2.02
SMAD1-203ENST00000502342 HARS2P49590 506 aaKnown RBP2.46□□□□□ -2.02
SMAD1-203ENST00000502342 TERF1P54274 439 aa2.46□□□□□ -2.02
SMAD1-203ENST00000502342 HNRNPH2P55795 449 aaKnown RBP2.46□□□□□ -2.02
SMAD1-203ENST00000502342 EIF3BP55884 814 aaKnown RBP2.46□□□□□ -2.02
SMAD1-203ENST00000502342 ISL1P61371 349 aa2.46□□□□□ -2.02
SMAD1-203ENST00000502342 PHEXP78562 749 aa2.46□□□□□ -2.02
SMAD1-203ENST00000502342 RELQ04864 619 aaPredicted RBP2.46□□□□□ -2.02
SMAD1-203ENST00000502342 PTP4A2Q12974 167 aa2.46□□□□□ -2.02
SMAD1-203ENST00000502342 DCTN2Q13561 401 aaKnown RBP2.46□□□□□ -2.02
SMAD1-203ENST00000502342 RBBP5Q15291 538 aaKnown RBP2.46□□□□□ -2.02
SMAD1-203ENST00000502342 CCDC96Q2M329 555 aa2.46□□□□□ -2.02
SMAD1-203ENST00000502342 KRTAP24-1Q3LI83 254 aa2.46□□□□□ -2.02
SMAD1-203ENST00000502342 ACCSLQ4AC99 568 aa2.46□□□□□ -2.02
SMAD1-203ENST00000502342 KCNT1Q5JUK3 1230 aa2.46□□□□□ -2.02
SMAD1-203ENST00000502342 TRNP1Q6NT89 227 aa2.46□□□□□ -2.02
SMAD1-203ENST00000502342 MEX3BQ6ZN04 569 aaKnown RBP2.46□□□□□ -2.02
SMAD1-203ENST00000502342 FOXL2NBQ6ZUU3 175 aa2.46□□□□□ -2.02
SMAD1-203ENST00000502342 TRMT1LQ7Z2T5 733 aaKnown RBP2.46□□□□□ -2.02
SMAD1-203ENST00000502342 KMT5CQ86Y97 462 aa2.46□□□□□ -2.02
SMAD1-203ENST00000502342 CHERPQ8IWX8 916 aaKnown RBP2.46□□□□□ -2.02
SMAD1-203ENST00000502342 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP2.46□□□□□ -2.02
SMAD1-203ENST00000502342 RNF113BQ8IZP6 322 aaKnown RBP2.46□□□□□ -2.02
SMAD1-203ENST00000502342 CNTROBQ8N137 903 aa2.46□□□□□ -2.02
SMAD1-203ENST00000502342 CIARTQ8N365 385 aaPredicted RBP2.46□□□□□ -2.02
SMAD1-203ENST00000502342 METTL27Q8N6F8 245 aaPredicted RBP2.46□□□□□ -2.02
SMAD1-203ENST00000502342 KBTBD3Q8NAB2 608 aa2.46□□□□□ -2.02
SMAD1-203ENST00000502342 SPATA22Q8NHS9 363 aa2.46□□□□□ -2.02
SMAD1-203ENST00000502342 NFKBIDQ8NI38 313 aa2.46□□□□□ -2.02
SMAD1-203ENST00000502342 PPM1EQ8WY54 764 aa2.46□□□□□ -2.02
SMAD1-203ENST00000502342 GTF3C6Q969F1 213 aa2.46□□□□□ -2.02
SMAD1-203ENST00000502342 SMARCE1Q969G3 411 aa2.46□□□□□ -2.02
SMAD1-203ENST00000502342 ORAI1Q96D31 301 aa2.46□□□□□ -2.02
SMAD1-203ENST00000502342 RRP36Q96EU6 259 aaKnown RBP2.46□□□□□ -2.02
SMAD1-203ENST00000502342 SLC41A2Q96JW4 573 aa2.46□□□□□ -2.02
SMAD1-203ENST00000502342 HARBI1Q96MB7 349 aa2.46□□□□□ -2.02
SMAD1-203ENST00000502342 FAM110AQ9BQ89 295 aa2.46□□□□□ -2.02
SMAD1-203ENST00000502342 USP44Q9H0E7 712 aa2.46□□□□□ -2.02
SMAD1-203ENST00000502342 EBF2Q9HAK2 575 aa2.46□□□□□ -2.02
SMAD1-203ENST00000502342 KIF9Q9HAQ2 790 aa2.46□□□□□ -2.02
SMAD1-203ENST00000502342 WASH6PQ9NQA3 447 aa2.46□□□□□ -2.02
SMAD1-203ENST00000502342 ASAH2Q9NR71 780 aa2.46□□□□□ -2.02
SMAD1-203ENST00000502342 SLC6A13Q9NSD5 602 aa2.46□□□□□ -2.02
SMAD1-203ENST00000502342 MCM9Q9NXL9 1143 aa2.46□□□□□ -2.02
SMAD1-203ENST00000502342 C1RLQ9NZP8 487 aa2.46□□□□□ -2.02
SMAD1-203ENST00000502342 RALYQ9UKM9 306 aaKnown RBP2.46□□□□□ -2.02
SMAD1-203ENST00000502342 NAALADL1Q9UQQ1 740 aa2.46□□□□□ -2.02
SMAD1-203ENST00000502342 CRYL1Q9Y2S2 319 aa2.46□□□□□ -2.02
SMAD1-203ENST00000502342 AMDHD2Q9Y303 409 aa2.46□□□□□ -2.02
SMAD1-203ENST00000502342 ARID4BQ4LE39 1312 aaPredicted RBP2.45□□□□□ -2.02
SMAD1-203ENST00000502342 FAM237AA0A1B0GTK4 181 aa2.45□□□□□ -2.02
SMAD1-203ENST00000502342 A0A1W2PS18 150 aa2.45□□□□□ -2.02
SMAD1-203ENST00000502342 A6NLC8 198 aa2.45□□□□□ -2.02
SMAD1-203ENST00000502342 VCYO14598 125 aa2.45□□□□□ -2.02
SMAD1-203ENST00000502342 DVL1O14640 695 aa2.45□□□□□ -2.02
SMAD1-203ENST00000502342 LDLRAD4O15165 306 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms