RNA–Protein interactions for RNA: ENST00000501122.2

NEAT1-202, nuclear paraspeckle assembly transcript 1, humanhuman

BASIC

Gene NEAT1, Length 22,743 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-202ENST00000501122 CLPBQ9H078 707 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 ITM2CQ9NQX7 267 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 B3GNT2Q9NY97 397 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 A0A1W2PPW3 197 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 ZNF682O95780 498 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 ZNF169Q14929 603 aaPredicted RBP4.78□□□□□ -1.64
NEAT1-202ENST00000501122 NSMFQ6X4W1 530 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 CBWD2Q8IUF1 395 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 SLFN12Q8IYM2 578 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 OR6B3Q8NGW1 331 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 FCGR1BQ92637 280 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 C11orf24Q96F05 449 aaPredicted RBP4.78□□□□□ -1.64
NEAT1-202ENST00000501122 HSPA12BQ96MM6 686 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 SRRDQ9UH36 339 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 ALG6Q9Y672 507 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 MSX2P35548 267 aaPredicted RBP4.78□□□□□ -1.64
NEAT1-202ENST00000501122 RALGPS2Q86X27 583 aaPredicted RBP4.78□□□□□ -1.64
NEAT1-202ENST00000501122 WDR11Q9BZH6 1224 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 PITHD1Q9GZP4 211 aaPredicted RBP4.78□□□□□ -1.64
NEAT1-202ENST00000501122 TMEM45AQ9NWC5 275 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 A0A0A6YYH2 397 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 SLC35F4A4IF30 521 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 A6NJ64 397 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 AVILO75366 819 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 GDF11O95390 407 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 UMPSP11172 480 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 SLC30A6Q6NXT4 461 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 PPIL6Q8IXY8 311 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 PAPD5Q8NDF8 572 aaKnown RBP4.78□□□□□ -1.64
NEAT1-202ENST00000501122 SORBS3O60504 671 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 CD72P21854 359 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 SLC16A1P53985 500 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 SNTA1Q13424 505 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 FBXO43Q4G163 708 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 ST8SIA4Q92187 359 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 ZNF649Q9BS31 505 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 CTPS2Q9NRF8 586 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 C14orf105Q9NVL8 296 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 U3KQV3 271 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 NR5A2O00482 541 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 HMGB2P26583 209 aaKnown RBP4.78□□□□□ -1.64
NEAT1-202ENST00000501122 FRG1Q14331 258 aaKnown RBP4.78□□□□□ -1.64
NEAT1-202ENST00000501122 BAK1Q16611 211 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 AP5B1Q2VPB7 878 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 FNBP1LQ5T0N5 605 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 LRCH3Q96II8 777 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 TASP1Q9H6P5 420 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 NUDT15Q9NV35 164 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 STK32BQ9NY57 414 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 GTF2A1LQ9UNN4 478 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 MRPS23Q9Y3D9 190 aaKnown RBP4.78□□□□□ -1.64
NEAT1-202ENST00000501122 MYO9BQ13459 2157 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 RNF225M0QZC1 329 aaPredicted RBP4.78□□□□□ -1.64
NEAT1-202ENST00000501122 BMXP51813 675 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 YWHAZP63104 245 aaKnown RBP4.78□□□□□ -1.64
NEAT1-202ENST00000501122 SPRED3Q2MJR0 410 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 PTPN20Q4JDL3 420 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 RAET1GQ6H3X3 334 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 ZNF529Q6P280 563 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 AGPAT1Q99943 283 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 FBXO6Q9NRD1 293 aaPredicted RBP4.78□□□□□ -1.64
NEAT1-202ENST00000501122 SMPD3Q9NY59 655 aaPredicted RBP4.78□□□□□ -1.64
NEAT1-202ENST00000501122 ETS1P14921 441 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 BMP6P22004 513 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 RPS9P46781 194 aaKnown RBP4.78□□□□□ -1.64
NEAT1-202ENST00000501122 DOC2AQ14183 400 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 HSD3B7Q9H2F3 369 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 USP29Q9HBJ7 922 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 SH3BP4Q9P0V3 963 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 NOX1Q9Y5S8 564 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 CSF2P04141 144 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 FMO5P49326 533 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 NCOA2Q15596 1464 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 SHROOM1Q2M3G4 852 aaPredicted RBP4.78□□□□□ -1.64
NEAT1-202ENST00000501122 ZRANB3Q5FWF4 1079 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 EMSYQ7Z589 1322 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 OR52K1Q8NGK4 314 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 ADAMTS16Q8TE57 1224 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 RAD9AQ99638 391 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 DHX33Q9H6R0 707 aaKnown RBP4.78□□□□□ -1.64
NEAT1-202ENST00000501122 SPAG4Q9NPE6 437 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 RPL4P36578 427 aaKnown RBP4.78□□□□□ -1.64
NEAT1-202ENST00000501122 SPDYE2Q495Y8 402 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 KLHDC7AQ5VTJ3 777 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 ADIPOR2Q86V24 386 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 ZNF567Q8N184 647 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 ZNF321PQ8N8H1 164 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 ZNF564Q8TBZ8 553 aaPredicted RBP4.78□□□□□ -1.64
NEAT1-202ENST00000501122 ZNF696Q9H7X3 374 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 ZNF701M0R085 212 aaPredicted RBP4.78□□□□□ -1.64
NEAT1-202ENST00000501122 TBXAS1P24557 533 aaPredicted RBP4.78□□□□□ -1.64
NEAT1-202ENST00000501122 NLRP8Q86W28 1048 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 ST8SIA2Q92186 375 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 RCN3Q96D15 328 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 TWNKQ96RR1 684 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 RNF112Q9ULX5 631 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 ANKDD1BA6NHY2 528 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 SNAPINO95295 136 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 PTENP60484 403 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 MC2RQ01718 297 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms