RNA–Protein interactions for RNA: ENST00000498254.5

CALD1-224, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-224ENST00000498254 TGDSO95455 350 aa3.72□□□□□ -1.81
CALD1-224ENST00000498254 C22orf31O95567 290 aa3.72□□□□□ -1.81
CALD1-224ENST00000498254 IGLV2-14P01704 120 aa3.72□□□□□ -1.81
CALD1-224ENST00000498254 MMP3P08254 477 aa3.72□□□□□ -1.81
CALD1-224ENST00000498254 C6P13671 934 aa3.72□□□□□ -1.81
CALD1-224ENST00000498254 MUTP22033 750 aa3.72□□□□□ -1.81
CALD1-224ENST00000498254 TBXAS1P24557 533 aaPredicted RBP3.72□□□□□ -1.81
CALD1-224ENST00000498254 HOXD9P28356 352 aaPredicted RBP3.72□□□□□ -1.81
CALD1-224ENST00000498254 HOXA13P31271 388 aaPredicted RBP3.72□□□□□ -1.81
CALD1-224ENST00000498254 ZNF41P51814 821 aaPredicted RBP3.72□□□□□ -1.81
CALD1-224ENST00000498254 RPS13P62277 151 aaKnown RBP3.72□□□□□ -1.81
CALD1-224ENST00000498254 PPP2R2BQ00005 443 aa3.72□□□□□ -1.81
CALD1-224ENST00000498254 FAM27E3Q08E93 113 aa3.72□□□□□ -1.81
CALD1-224ENST00000498254 SCARB2Q14108 478 aa3.72□□□□□ -1.81
CALD1-224ENST00000498254 SHBQ15464 509 aa3.72□□□□□ -1.81
CALD1-224ENST00000498254 TCP11X2Q5H9J9 407 aa3.72□□□□□ -1.81
CALD1-224ENST00000498254 PIK3CD-AS1Q5SR53 167 aa3.72□□□□□ -1.81
CALD1-224ENST00000498254 MEX3CQ5U5Q3 659 aaKnown RBP3.72□□□□□ -1.81
CALD1-224ENST00000498254 LRCH2Q5VUJ6 765 aa3.72□□□□□ -1.81
CALD1-224ENST00000498254 KRT80Q6KB66 452 aa3.72□□□□□ -1.81
CALD1-224ENST00000498254 ANKRD54Q6NXT1 300 aa3.72□□□□□ -1.81
CALD1-224ENST00000498254 DPPA4Q7L190 304 aa3.72□□□□□ -1.81
CALD1-224ENST00000498254 LINGO2Q7L985 606 aa3.72□□□□□ -1.81
CALD1-224ENST00000498254 PALB2Q86YC2 1186 aa3.72□□□□□ -1.81
CALD1-224ENST00000498254 LDLRAD3Q86YD5 345 aa3.72□□□□□ -1.81
CALD1-224ENST00000498254 THNSL1Q8IYQ7 743 aa3.72□□□□□ -1.81
CALD1-224ENST00000498254 RNF168Q8IYW5 571 aaPredicted RBP3.72□□□□□ -1.81
CALD1-224ENST00000498254 OR8H3Q8N146 312 aa3.72□□□□□ -1.81
CALD1-224ENST00000498254 KDM1BQ8NB78 822 aa3.72□□□□□ -1.81
CALD1-224ENST00000498254 GOT1L1Q8NHS2 421 aaPredicted RBP3.72□□□□□ -1.81
CALD1-224ENST00000498254 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.72□□□□□ -1.81
CALD1-224ENST00000498254 BCAS4Q8TDM0 211 aa3.72□□□□□ -1.81
CALD1-224ENST00000498254 ZNF622Q969S3 477 aaKnown RBP eCLIP3.72□□□□□ -1.81
CALD1-224ENST00000498254 MOAP1Q96BY2 351 aa3.72□□□□□ -1.81
CALD1-224ENST00000498254 ZNF333Q96JL9 665 aa3.72□□□□□ -1.81
CALD1-224ENST00000498254 TTC14Q96N46 770 aa3.72□□□□□ -1.81
CALD1-224ENST00000498254 GBP5Q96PP8 586 aa3.72□□□□□ -1.81
CALD1-224ENST00000498254 SLITRK1Q96PX8 696 aa3.72□□□□□ -1.81
CALD1-224ENST00000498254 ACOX2Q99424 681 aa3.72□□□□□ -1.81
CALD1-224ENST00000498254 SEPT5Q99719 369 aaPredicted RBP3.72□□□□□ -1.81
CALD1-224ENST00000498254 PRRX2Q99811 253 aa3.72□□□□□ -1.81
CALD1-224ENST00000498254 ERVMER34-1Q9H9K5 563 aa3.72□□□□□ -1.81
CALD1-224ENST00000498254 MSRB1Q9NZV6 116 aa3.72□□□□□ -1.81
CALD1-224ENST00000498254 SLC9A2Q9UBY0 812 aa3.72□□□□□ -1.81
CALD1-224ENST00000498254 ZNF112Q9UJU3 913 aa3.72□□□□□ -1.81
CALD1-224ENST00000498254 ING1Q9UK53 422 aaPredicted RBP3.72□□□□□ -1.81
CALD1-224ENST00000498254 ZNF335Q9H4Z2 1342 aaPredicted RBP3.71□□□□□ -1.81
CALD1-224ENST00000498254 A0A1B0GVM2 712 aa3.71□□□□□ -1.82
CALD1-224ENST00000498254 LNP1A1A4G5 178 aa3.71□□□□□ -1.82
CALD1-224ENST00000498254 KDM4EB2RXH2 506 aaPredicted RBP3.71□□□□□ -1.82
CALD1-224ENST00000498254 CLGNO14967 610 aa3.71□□□□□ -1.82
CALD1-224ENST00000498254 PRPF4O43172 522 aaKnown RBP eCLIP3.71□□□□□ -1.82
CALD1-224ENST00000498254 SPRY1O43609 319 aaPredicted RBP3.71□□□□□ -1.82
CALD1-224ENST00000498254 RSL1D1O76021 490 aaKnown RBP3.71□□□□□ -1.82
CALD1-224ENST00000498254 FTCDO95954 541 aa3.71□□□□□ -1.82
CALD1-224ENST00000498254 SLPIP03973 132 aa3.71□□□□□ -1.82
CALD1-224ENST00000498254 CTSAP10619 480 aa3.71□□□□□ -1.82
CALD1-224ENST00000498254 VDRP11473 427 aa3.71□□□□□ -1.82
CALD1-224ENST00000498254 ENO3P13929 434 aaPredicted RBP3.71□□□□□ -1.82
CALD1-224ENST00000498254 CHRNB2P17787 502 aa3.71□□□□□ -1.82
CALD1-224ENST00000498254 ATP5F1P24539 256 aaPredicted RBP3.71□□□□□ -1.82
CALD1-224ENST00000498254 ACADLP28330 430 aa3.71□□□□□ -1.82
CALD1-224ENST00000498254 OAS2P29728 719 aaKnown RBP3.71□□□□□ -1.82
CALD1-224ENST00000498254 TLX1P31314 330 aaPredicted RBP3.71□□□□□ -1.82
CALD1-224ENST00000498254 PRCPP42785 496 aa3.71□□□□□ -1.82
CALD1-224ENST00000498254 MSH2P43246 934 aa3.71□□□□□ -1.82
CALD1-224ENST00000498254 GPR143P51810 404 aa3.71□□□□□ -1.82
CALD1-224ENST00000498254 ID2Q02363 134 aa3.71□□□□□ -1.82
CALD1-224ENST00000498254 ALCAMQ13740 583 aa3.71□□□□□ -1.82
CALD1-224ENST00000498254 BAATQ14032 418 aaPredicted RBP3.71□□□□□ -1.82
CALD1-224ENST00000498254 KRT33BQ14525 404 aa3.71□□□□□ -1.82
CALD1-224ENST00000498254 PNLIPRP3Q17RR3 467 aa3.71□□□□□ -1.82
CALD1-224ENST00000498254 C15orf59Q2T9L4 293 aaPredicted RBP3.71□□□□□ -1.82
CALD1-224ENST00000498254 ASPHD1Q5U4P2 390 aa3.71□□□□□ -1.82
CALD1-224ENST00000498254 PAPD7Q5XG87 772 aaKnown RBP3.71□□□□□ -1.82
CALD1-224ENST00000498254 TMEM211Q6ICI0 200 aa3.71□□□□□ -1.82
CALD1-224ENST00000498254 ZNF788Q6ZQV5 615 aa3.71□□□□□ -1.82
CALD1-224ENST00000498254 MFSD6Q6ZSS7 791 aa3.71□□□□□ -1.82
CALD1-224ENST00000498254 TRILQ7L0X0 811 aa3.71□□□□□ -1.82
CALD1-224ENST00000498254 MRGPRGQ86SM5 289 aa3.71□□□□□ -1.82
CALD1-224ENST00000498254 IQCA1Q86XH1 822 aa3.71□□□□□ -1.82
CALD1-224ENST00000498254 CAMK1DQ8IU85 385 aa3.71□□□□□ -1.82
CALD1-224ENST00000498254 ARID3BQ8IVW6 561 aaPredicted RBP3.71□□□□□ -1.82
CALD1-224ENST00000498254 WDR63Q8IWG1 891 aa3.71□□□□□ -1.82
CALD1-224ENST00000498254 SFTPA2Q8IWL1 248 aa3.71□□□□□ -1.82
CALD1-224ENST00000498254 ZDHHC23Q8IYP9 409 aa3.71□□□□□ -1.82
CALD1-224ENST00000498254 Q8N1X5 172 aa3.71□□□□□ -1.82
CALD1-224ENST00000498254 SCCPDHQ8NBX0 429 aa3.71□□□□□ -1.82
CALD1-224ENST00000498254 SEMA6DQ8NFY4 1073 aa3.71□□□□□ -1.82
CALD1-224ENST00000498254 GSDMBQ8TAX9 411 aa3.71□□□□□ -1.82
CALD1-224ENST00000498254 LPGAT1Q92604 370 aa3.71□□□□□ -1.82
CALD1-224ENST00000498254 SNAPC3Q92966 411 aa3.71□□□□□ -1.82
CALD1-224ENST00000498254 MSI2Q96DH6 328 aaKnown RBP3.71□□□□□ -1.82
CALD1-224ENST00000498254 VMP1Q96GC9 406 aa3.71□□□□□ -1.82
CALD1-224ENST00000498254 CCDC34Q96HJ3 373 aa3.71□□□□□ -1.82
CALD1-224ENST00000498254 EGLN2Q96KS0 407 aa3.71□□□□□ -1.82
CALD1-224ENST00000498254 LINC00615Q96LM1 132 aaPredicted RBP3.71□□□□□ -1.82
CALD1-224ENST00000498254 FER1L6-AS2Q96M78 137 aa3.71□□□□□ -1.82
CALD1-224ENST00000498254 NUDCD1Q96RS6 583 aa3.71□□□□□ -1.82
CALD1-224ENST00000498254 SMC6Q96SB8 1091 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms