RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 CLDN7O95471 211 aa20.04■□□□□ 0.8
CTSD-206ENST00000497544 IVDP26440 423 aa20.04■□□□□ 0.8
CTSD-206ENST00000497544 DHPSP49366 369 aaPredicted RBP20.04■□□□□ 0.8
CTSD-206ENST00000497544 PPP2CBP62714 309 aa20.04■□□□□ 0.8
CTSD-206ENST00000497544 PPP2CAP67775 309 aa20.04■□□□□ 0.8
CTSD-206ENST00000497544 ACOX1Q15067 660 aa20.04■□□□□ 0.8
CTSD-206ENST00000497544 CNGA3Q16281 694 aa20.04■□□□□ 0.8
CTSD-206ENST00000497544 PLK5Q496M5 336 aa20.04■□□□□ 0.8
CTSD-206ENST00000497544 GLE1Q53GS7 698 aaKnown RBP20.04■□□□□ 0.8
CTSD-206ENST00000497544 SPDYCQ5MJ68 293 aa20.04■□□□□ 0.8
CTSD-206ENST00000497544 RNASEH2BQ5TBB1 312 aaKnown RBP20.04■□□□□ 0.8
CTSD-206ENST00000497544 ANKRD22Q5VYY1 191 aa20.04■□□□□ 0.8
CTSD-206ENST00000497544 SEL1L3Q68CR1 1132 aa20.04■□□□□ 0.8
CTSD-206ENST00000497544 LRRC66Q68CR7 880 aa20.04■□□□□ 0.8
CTSD-206ENST00000497544 NAT8LQ8N9F0 302 aa20.04■□□□□ 0.8
CTSD-206ENST00000497544 MCUQ8NE86 351 aa20.04■□□□□ 0.8
CTSD-206ENST00000497544 SNX19Q92543 992 aa20.04■□□□□ 0.8
CTSD-206ENST00000497544 BIRC7Q96CA5 298 aa20.04■□□□□ 0.8
CTSD-206ENST00000497544 SLC17A9Q9BYT1 436 aa20.04■□□□□ 0.8
CTSD-206ENST00000497544 DPH5Q9H2P9 285 aa20.04■□□□□ 0.8
CTSD-206ENST00000497544 CASS4Q9NQ75 786 aa20.04■□□□□ 0.8
CTSD-206ENST00000497544 PIH1D1Q9NWS0 290 aaKnown RBP20.04■□□□□ 0.8
CTSD-206ENST00000497544 ZNF711Q9Y462 761 aa20.04■□□□□ 0.8
CTSD-206ENST00000497544 SPO11Q9Y5K1 396 aa20.04■□□□□ 0.8
CTSD-206ENST00000497544 LRRK1Q38SD2 2015 aa20.03■□□□□ 0.8
CTSD-206ENST00000497544 A0A0U1RQS6 177 aa20.03■□□□□ 0.8
CTSD-206ENST00000497544 PSMD11O00231 422 aa20.03■□□□□ 0.8
CTSD-206ENST00000497544 PAK4O96013 591 aaPredicted RBP20.03■□□□□ 0.8
CTSD-206ENST00000497544 C6P13671 934 aa20.03■□□□□ 0.8
CTSD-206ENST00000497544 LHCGRP22888 699 aa20.03■□□□□ 0.8
CTSD-206ENST00000497544 RPL21P46778 160 aaKnown RBP20.03■□□□□ 0.8
CTSD-206ENST00000497544 SLC7A5Q01650 507 aa20.03■□□□□ 0.8
CTSD-206ENST00000497544 PTSQ03393 145 aa20.03■□□□□ 0.8
CTSD-206ENST00000497544 CALCOCO2Q13137 446 aa20.03■□□□□ 0.8
CTSD-206ENST00000497544 SF3A2Q15428 464 aaKnown RBP20.03■□□□□ 0.8
CTSD-206ENST00000497544 SETMARQ53H47 684 aaPredicted RBP20.03■□□□□ 0.8
CTSD-206ENST00000497544 SOWAHCQ53LP3 525 aaPredicted RBP20.03■□□□□ 0.8
CTSD-206ENST00000497544 PMS2CLQ68D20 193 aa20.03■□□□□ 0.8
CTSD-206ENST00000497544 DUPD1Q68J44 220 aa20.03■□□□□ 0.8
CTSD-206ENST00000497544 LRRC8BQ6P9F7 803 aa20.03■□□□□ 0.8
CTSD-206ENST00000497544 LYSMD3Q7Z3D4 306 aa20.03■□□□□ 0.8
CTSD-206ENST00000497544 GLT6D1Q7Z4J2 308 aa20.03■□□□□ 0.8
CTSD-206ENST00000497544 RGL4Q8IZJ4 473 aa20.03■□□□□ 0.8
CTSD-206ENST00000497544 BRSK1Q8TDC3 778 aa20.03■□□□□ 0.8
CTSD-206ENST00000497544 GATA6Q92908 595 aa20.03■□□□□ 0.8
CTSD-206ENST00000497544 ZC3H10Q96K80 434 aaKnown RBP20.03■□□□□ 0.8
CTSD-206ENST00000497544 HSPA12BQ96MM6 686 aa20.03■□□□□ 0.8
CTSD-206ENST00000497544 C1QTNF7Q9BXJ2 289 aa20.03■□□□□ 0.8
CTSD-206ENST00000497544 C1QTNF2Q9BXJ5 285 aa20.03■□□□□ 0.8
CTSD-206ENST00000497544 ANAPC5Q9UJX4 755 aa20.03■□□□□ 0.8
CTSD-206ENST00000497544 ZBTB32Q9Y2Y4 487 aaPredicted RBP20.03■□□□□ 0.8
CTSD-206ENST00000497544 COQ6Q9Y2Z9 468 aa20.03■□□□□ 0.8
CTSD-206ENST00000497544 LAMA5O15230 3695 aa20.02■□□□□ 0.8
CTSD-206ENST00000497544 GOLGA8CPA6NN73 597 aa20.02■□□□□ 0.8
CTSD-206ENST00000497544 C2orf81A6NN90 581 aa20.02■□□□□ 0.8
CTSD-206ENST00000497544 GOLGA8MH3BSY2 632 aa20.02■□□□□ 0.8
CTSD-206ENST00000497544 SMAPO00193 183 aa20.02■□□□□ 0.8
CTSD-206ENST00000497544 SLC31A1O15431 190 aa20.02■□□□□ 0.8
CTSD-206ENST00000497544 CRTAMO95727 393 aa20.02■□□□□ 0.8
CTSD-206ENST00000497544 SLC4A1P02730 911 aa20.02■□□□□ 0.8
CTSD-206ENST00000497544 IGHV4-34P06331 123 aa20.02■□□□□ 0.8
CTSD-206ENST00000497544 NUDT1P36639 197 aa20.02■□□□□ 0.8
CTSD-206ENST00000497544 NPY2RP49146 381 aa20.02■□□□□ 0.8
CTSD-206ENST00000497544 ITGA8P53708 1063 aa20.02■□□□□ 0.8
CTSD-206ENST00000497544 MORF4L2Q15014 288 aa20.02■□□□□ 0.8
CTSD-206ENST00000497544 CDKN3Q16667 212 aa20.02■□□□□ 0.8
CTSD-206ENST00000497544 ZNF284Q2VY69 593 aa20.02■□□□□ 0.8
CTSD-206ENST00000497544 TMEM259Q4ZIN3 620 aa20.02■□□□□ 0.8
CTSD-206ENST00000497544 WDR45BQ5MNZ6 344 aa20.02■□□□□ 0.8
CTSD-206ENST00000497544 PSAPL1Q6NUJ1 521 aa20.02■□□□□ 0.8
CTSD-206ENST00000497544 ARMCX6Q7L4S7 300 aa20.02■□□□□ 0.8
CTSD-206ENST00000497544 TMC3Q7Z5M5 1100 aa20.02■□□□□ 0.8
CTSD-206ENST00000497544 HOOK3Q86VS8 718 aa20.02■□□□□ 0.8
CTSD-206ENST00000497544 SLC41A1Q8IVJ1 513 aa20.02■□□□□ 0.8
CTSD-206ENST00000497544 CBARPQ8N350 705 aaPredicted RBP20.02■□□□□ 0.8
CTSD-206ENST00000497544 ASB12Q8WXK4 309 aa20.02■□□□□ 0.8
CTSD-206ENST00000497544 ZCCHC14Q8WYQ9 949 aaKnown RBP20.02■□□□□ 0.8
CTSD-206ENST00000497544 KCTD5Q9NXV2 234 aa20.02■□□□□ 0.8
CTSD-206ENST00000497544 PKD2L2Q9NZM6 624 aa20.02■□□□□ 0.8
CTSD-206ENST00000497544 BFARQ9NZS9 450 aa20.02■□□□□ 0.8
CTSD-206ENST00000497544 WHRNQ9P202 907 aa20.02■□□□□ 0.8
CTSD-206ENST00000497544 LAMA1P25391 3075 aa20.02■□□□□ 0.8
CTSD-206ENST00000497544 IGSF10Q6WRI0 2623 aa20.02■□□□□ 0.79
CTSD-206ENST00000497544 A0A1W2PPC4 97 aa20.01■□□□□ 0.79
CTSD-206ENST00000497544 LATO43561 262 aa20.01■□□□□ 0.79
CTSD-206ENST00000497544 RECQL5O94762 991 aaPredicted RBP20.01■□□□□ 0.79
CTSD-206ENST00000497544 TMEM63AO94886 807 aa20.01■□□□□ 0.79
CTSD-206ENST00000497544 SEC31AO94979 1220 aaKnown RBP20.01■□□□□ 0.79
CTSD-206ENST00000497544 STC1P52823 247 aa20.01■□□□□ 0.79
CTSD-206ENST00000497544 SESN2P58004 480 aaPredicted RBP20.01■□□□□ 0.79
CTSD-206ENST00000497544 FOXC1Q12948 553 aa20.01■□□□□ 0.79
CTSD-206ENST00000497544 POU6F1Q14863 301 aa20.01■□□□□ 0.79
CTSD-206ENST00000497544 TAF1AQ15573 450 aaPredicted RBP20.01■□□□□ 0.79
CTSD-206ENST00000497544 STPG1Q5TH74 334 aa20.01■□□□□ 0.79
CTSD-206ENST00000497544 LYSMD4Q5XG99 296 aa20.01■□□□□ 0.79
CTSD-206ENST00000497544 HSD11B1LQ7Z5J1 315 aa20.01■□□□□ 0.79
CTSD-206ENST00000497544 XAB2Q9HCS7 855 aaKnown RBP20.01■□□□□ 0.79
CTSD-206ENST00000497544 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.01■□□□□ 0.79
CTSD-206ENST00000497544 EIF2B4Q9UI10 523 aaKnown RBP20.01■□□□□ 0.79
CTSD-206ENST00000497544 DMTF1Q9Y222 760 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms