RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 ABHD6Q9BV23 337 aa6.14□□□□□ -1.43
BRCA1-224ENST00000497488 CADM1Q9BY67 442 aaKnown RBP6.14□□□□□ -1.43
BRCA1-224ENST00000497488 RWDD1Q9H446 243 aaPredicted RBP6.14□□□□□ -1.43
BRCA1-224ENST00000497488 NOL11Q9H8H0 719 aaKnown RBP6.14□□□□□ -1.43
BRCA1-224ENST00000497488 SFXN1Q9H9B4 322 aa6.14□□□□□ -1.43
BRCA1-224ENST00000497488 CD93Q9NPY3 652 aa6.14□□□□□ -1.43
BRCA1-224ENST00000497488 SERINC1Q9NRX5 453 aa6.14□□□□□ -1.43
BRCA1-224ENST00000497488 DNAJC11Q9NVH1 559 aa6.14□□□□□ -1.43
BRCA1-224ENST00000497488 TMEM248Q9NWD8 314 aa6.14□□□□□ -1.43
BRCA1-224ENST00000497488 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.14□□□□□ -1.437e-7■□□□□ 9.9
BRCA1-224ENST00000497488 FBXW2Q9UKT8 454 aa6.14□□□□□ -1.43
BRCA1-224ENST00000497488 SMC3Q9UQE7 1217 aa6.14□□□□□ -1.43
BRCA1-224ENST00000497488 WDR37Q9Y2I8 494 aa6.14□□□□□ -1.43
BRCA1-224ENST00000497488 TDRKHQ9Y2W6 561 aaKnown RBP6.14□□□□□ -1.43
BRCA1-224ENST00000497488 NR2E1Q9Y466 385 aa6.14□□□□□ -1.43
BRCA1-224ENST00000497488 UTYO14607 1347 aa6.14□□□□□ -1.43
BRCA1-224ENST00000497488 FAM205AQ6ZU69 1335 aa6.14□□□□□ -1.43
BRCA1-224ENST00000497488 ZMYM4Q5VZL5 1548 aa6.14□□□□□ -1.43
BRCA1-224ENST00000497488 EHBP1L1Q8N3D4 1523 aa6.14□□□□□ -1.43
BRCA1-224ENST00000497488 ARHGEF40Q8TER5 1519 aa6.14□□□□□ -1.43
BRCA1-224ENST00000497488 GPATCH8Q9UKJ3 1502 aaKnown RBP6.14□□□□□ -1.43
BRCA1-224ENST00000497488 TIAM1Q13009 1591 aa6.14□□□□□ -1.43
BRCA1-224ENST00000497488 C2orf81A6NN90 581 aa6.13□□□□□ -1.43
BRCA1-224ENST00000497488 GRXCR1A8MXD5 290 aa6.13□□□□□ -1.43
BRCA1-224ENST00000497488 SEC14L5O43304 696 aa6.13□□□□□ -1.43
BRCA1-224ENST00000497488 PMPCBO75439 489 aa6.13□□□□□ -1.43
BRCA1-224ENST00000497488 IPO13O94829 963 aaKnown RBP6.13□□□□□ -1.43
BRCA1-224ENST00000497488 VIMP08670 466 aaKnown RBP6.13□□□□□ -1.43
BRCA1-224ENST00000497488 ALDOCP09972 364 aaKnown RBP6.13□□□□□ -1.43
BRCA1-224ENST00000497488 FAM86B2P0C5J1 330 aa6.13□□□□□ -1.43
BRCA1-224ENST00000497488 HSPA5P11021 654 aaKnown RBP6.13□□□□□ -1.43
BRCA1-224ENST00000497488 SLC2A4P14672 509 aa6.13□□□□□ -1.43
BRCA1-224ENST00000497488 CREB1P16220 341 aa6.13□□□□□ -1.43
BRCA1-224ENST00000497488 GNAT2P19087 354 aa6.13□□□□□ -1.43
BRCA1-224ENST00000497488 AGTR2P50052 363 aa6.13□□□□□ -1.43
BRCA1-224ENST00000497488 TGFB2P61812 414 aa6.13□□□□□ -1.43
BRCA1-224ENST00000497488 HSD11B2P80365 405 aa6.13□□□□□ -1.43
BRCA1-224ENST00000497488 RBPJQ06330 500 aa6.13□□□□□ -1.43
BRCA1-224ENST00000497488 DRAP1Q14919 205 aaPredicted RBP6.13□□□□□ -1.43
BRCA1-224ENST00000497488 SHBQ15464 509 aa6.13□□□□□ -1.43
BRCA1-224ENST00000497488 CCDC40Q4G0X9 1142 aa6.13□□□□□ -1.43
BRCA1-224ENST00000497488 RARS2Q5T160 578 aaKnown RBP6.13□□□□□ -1.43
BRCA1-224ENST00000497488 TMEM198Q66K66 360 aa6.13□□□□□ -1.43
BRCA1-224ENST00000497488 TRIM72Q6ZMU5 477 aa6.13□□□□□ -1.43
BRCA1-224ENST00000497488 RBM43Q6ZSC3 357 aaKnown RBP6.13□□□□□ -1.43
BRCA1-224ENST00000497488 C15orf52Q6ZUT6 534 aaKnown RBP6.13□□□□□ -1.43
BRCA1-224ENST00000497488 CACNA2D4Q7Z3S7 1137 aa6.13□□□□□ -1.43
BRCA1-224ENST00000497488 ADIPOR2Q86V24 386 aa6.13□□□□□ -1.43
BRCA1-224ENST00000497488 TDRPQ86YL5 185 aa6.13□□□□□ -1.43
BRCA1-224ENST00000497488 HACE1Q8IYU2 909 aa6.13□□□□□ -1.43
BRCA1-224ENST00000497488 PNPLA1Q8N8W4 532 aa6.13□□□□□ -1.43
BRCA1-224ENST00000497488 UXS1Q8NBZ7 420 aa6.13□□□□□ -1.43
BRCA1-224ENST00000497488 GDPD5Q8WTR4 605 aa6.13□□□□□ -1.43
BRCA1-224ENST00000497488 EEF2KMTQ96G04 330 aa6.13□□□□□ -1.43
BRCA1-224ENST00000497488 C5orf30Q96GV9 206 aa6.13□□□□□ -1.43
BRCA1-224ENST00000497488 GDAP1L1Q96MZ0 367 aa6.13□□□□□ -1.43
BRCA1-224ENST00000497488 CINPQ9BW66 212 aaPredicted RBP6.13□□□□□ -1.43
BRCA1-224ENST00000497488 ACPTQ9BZG2 426 aa6.13□□□□□ -1.43
BRCA1-224ENST00000497488 AMBRA1Q9C0C7 1298 aa6.13□□□□□ -1.43
BRCA1-224ENST00000497488 CHMP4BQ9H444 224 aaKnown RBP6.13□□□□□ -1.43
BRCA1-224ENST00000497488 AGO3Q9H9G7 860 aaKnown RBP6.13□□□□□ -1.43
BRCA1-224ENST00000497488 GLOD4Q9HC38 313 aa6.13□□□□□ -1.43
BRCA1-224ENST00000497488 ABHD10Q9NUJ1 306 aa6.13□□□□□ -1.43
BRCA1-224ENST00000497488 ARL8BQ9NVJ2 186 aa6.13□□□□□ -1.43
BRCA1-224ENST00000497488 P4HTMQ9NXG6 502 aa6.13□□□□□ -1.43
BRCA1-224ENST00000497488 VPS18Q9P253 973 aa6.13□□□□□ -1.43
BRCA1-224ENST00000497488 NLKQ9UBE8 527 aa6.13□□□□□ -1.43
BRCA1-224ENST00000497488 HEY2Q9UBP5 337 aa6.13□□□□□ -1.43
BRCA1-224ENST00000497488 ADAM29Q9UKF5 820 aa6.13□□□□□ -1.43
BRCA1-224ENST00000497488 ADAMTS6Q9UKP5 1117 aa6.13□□□□□ -1.43
BRCA1-224ENST00000497488 GABRQQ9UN88 632 aa6.13□□□□□ -1.43
BRCA1-224ENST00000497488 B3GNT3Q9Y2A9 372 aa6.13□□□□□ -1.43
BRCA1-224ENST00000497488 ACEP12821 1306 aa6.13□□□□□ -1.43
BRCA1-224ENST00000497488 SALL3Q9BXA9 1300 aa6.13□□□□□ -1.43
BRCA1-224ENST00000497488 MTUS2Q5JR59 1369 aa6.13□□□□□ -1.43
BRCA1-224ENST00000497488 TRAPPC8Q9Y2L5 1435 aa6.13□□□□□ -1.43
BRCA1-224ENST00000497488 ABCC1P33527 1531 aa6.13□□□□□ -1.43
BRCA1-224ENST00000497488 SAMD9LQ8IVG5 1584 aa6.13□□□□□ -1.43
BRCA1-224ENST00000497488 A0A1B0GTW7 788 aa6.12□□□□□ -1.43
BRCA1-224ENST00000497488 A1L4Q6 167 aa6.12□□□□□ -1.43
BRCA1-224ENST00000497488 CTAGE9A4FU28 777 aa6.12□□□□□ -1.43
BRCA1-224ENST00000497488 ZSCAN5CA6NGD5 496 aaPredicted RBP6.12□□□□□ -1.43
BRCA1-224ENST00000497488 FAM25EA8MYX2 175 aa6.12□□□□□ -1.43
BRCA1-224ENST00000497488 O00370 1275 aa6.12□□□□□ -1.43
BRCA1-224ENST00000497488 BIN1O00499 593 aa6.12□□□□□ -1.43
BRCA1-224ENST00000497488 RASGRF2O14827 1237 aa6.12□□□□□ -1.43
BRCA1-224ENST00000497488 OGG1O15527 345 aa6.12□□□□□ -1.43
BRCA1-224ENST00000497488 KCNK5O95279 499 aa6.12□□□□□ -1.43
BRCA1-224ENST00000497488 PTBP3O95758 552 aaKnown RBP6.12□□□□□ -1.43
BRCA1-224ENST00000497488 PDGFBP01127 241 aaPredicted RBP6.12□□□□□ -1.43
BRCA1-224ENST00000497488 MBPP02686 304 aaPredicted RBP6.12□□□□□ -1.43
BRCA1-224ENST00000497488 PRNPP04156 253 aa6.12□□□□□ -1.43
BRCA1-224ENST00000497488 ABHD2P08910 425 aa6.12□□□□□ -1.43
BRCA1-224ENST00000497488 ZNF182P17025 639 aaPredicted RBP6.12□□□□□ -1.43
BRCA1-224ENST00000497488 TNFRSF1AP19438 455 aa6.12□□□□□ -1.43
BRCA1-224ENST00000497488 KLRC2P26717 231 aa6.12□□□□□ -1.43
BRCA1-224ENST00000497488 ACADLP28330 430 aa6.12□□□□□ -1.43
BRCA1-224ENST00000497488 DUSP1P28562 367 aa6.12□□□□□ -1.43
BRCA1-224ENST00000497488 GKP32189 559 aa6.12□□□□□ -1.43
BRCA1-224ENST00000497488 PCGF2P35227 344 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms