RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 CTNNA3Q9UI47 895 aa2.55□□□□□ -2
CKS1BP2-201ENST00000497342 MAPK8IP3Q9UPT6 1336 aa2.55□□□□□ -2
CKS1BP2-201ENST00000497342 SH3BP1Q9Y3L3 701 aa2.55□□□□□ -2
CKS1BP2-201ENST00000497342 PKP3Q9Y446 797 aa2.55□□□□□ -2
CKS1BP2-201ENST00000497342 PCDHAC2Q9Y5I4 1007 aa2.55□□□□□ -2
CKS1BP2-201ENST00000497342 RFX7Q2KHR2 1363 aa2.54□□□□□ -2
CKS1BP2-201ENST00000497342 A0A0G2JLL6 359 aaPredicted RBP2.54□□□□□ -2
CKS1BP2-201ENST00000497342 FAM237BA0A1B0GVD1 139 aa2.54□□□□□ -2
CKS1BP2-201ENST00000497342 C11orf97A0A1B0GVM6 126 aaPredicted RBP2.54□□□□□ -2
CKS1BP2-201ENST00000497342 MROH6A6NGR9 719 aa2.54□□□□□ -2
CKS1BP2-201ENST00000497342 MSTNO14793 375 aa2.54□□□□□ -2
CKS1BP2-201ENST00000497342 ADAMDEC1O15204 470 aa2.54□□□□□ -2
CKS1BP2-201ENST00000497342 WDR46O15213 610 aaKnown RBP2.54□□□□□ -2
CKS1BP2-201ENST00000497342 LIASO43766 372 aa2.54□□□□□ -2
CKS1BP2-201ENST00000497342 LRP3O75074 770 aa2.54□□□□□ -2
CKS1BP2-201ENST00000497342 TGDSO95455 350 aa2.54□□□□□ -2
CKS1BP2-201ENST00000497342 TPOP07202 933 aa2.54□□□□□ -2
CKS1BP2-201ENST00000497342 TUBBP07437 444 aa2.54□□□□□ -2
CKS1BP2-201ENST00000497342 MYBL1P10243 752 aa2.54□□□□□ -2
CKS1BP2-201ENST00000497342 CYP4B1P13584 511 aa2.54□□□□□ -2
CKS1BP2-201ENST00000497342 CHRM3P20309 590 aa2.54□□□□□ -2
CKS1BP2-201ENST00000497342 DRD1P21728 446 aa2.54□□□□□ -2
CKS1BP2-201ENST00000497342 PCSK6P29122 969 aa2.54□□□□□ -2
CKS1BP2-201ENST00000497342 GCH1P30793 250 aa2.54□□□□□ -2
CKS1BP2-201ENST00000497342 CDAP32320 146 aa2.54□□□□□ -2
CKS1BP2-201ENST00000497342 BUD31P41223 144 aaPredicted RBP2.54□□□□□ -2
CKS1BP2-201ENST00000497342 HNF4AP41235 474 aa2.54□□□□□ -2
CKS1BP2-201ENST00000497342 TXKP42681 527 aa2.54□□□□□ -2
CKS1BP2-201ENST00000497342 SLC15A1P46059 708 aa2.54□□□□□ -2
CKS1BP2-201ENST00000497342 NRIP1P48552 1158 aa2.54□□□□□ -2
CKS1BP2-201ENST00000497342 EFNA5P52803 228 aa2.54□□□□□ -2
CKS1BP2-201ENST00000497342 LIMK1P53667 647 aa2.54□□□□□ -2
CKS1BP2-201ENST00000497342 NXPH1P58417 271 aa2.54□□□□□ -2
CKS1BP2-201ENST00000497342 CXADRP78310 365 aa2.54□□□□□ -2
CKS1BP2-201ENST00000497342 CYP4F2P78329 520 aa2.54□□□□□ -2
CKS1BP2-201ENST00000497342 LRMPQ12912 555 aa2.54□□□□□ -2
CKS1BP2-201ENST00000497342 ALKBH1Q13686 389 aaKnown RBP2.54□□□□□ -2
CKS1BP2-201ENST00000497342 ALCAMQ13740 583 aa2.54□□□□□ -2
CKS1BP2-201ENST00000497342 BYSLQ13895 437 aaKnown RBP2.54□□□□□ -2
CKS1BP2-201ENST00000497342 NAA25Q14CX7 972 aa2.54□□□□□ -2
CKS1BP2-201ENST00000497342 E2F5Q15329 346 aa2.54□□□□□ -2
CKS1BP2-201ENST00000497342 HYAL4Q2M3T9 481 aa2.54□□□□□ -2
CKS1BP2-201ENST00000497342 C2orf76Q3KRA6 126 aa2.54□□□□□ -2
CKS1BP2-201ENST00000497342 MMEL1Q495T6 779 aa2.54□□□□□ -2
CKS1BP2-201ENST00000497342 GXYLT1Q4G148 440 aa2.54□□□□□ -2
CKS1BP2-201ENST00000497342 BMP2KLQ5H9B9 411 aa2.54□□□□□ -2
CKS1BP2-201ENST00000497342 SH2D4BQ5SQS7 431 aa2.54□□□□□ -2
CKS1BP2-201ENST00000497342 ZNF618Q5T7W0 954 aa2.54□□□□□ -2
CKS1BP2-201ENST00000497342 CST9LP1Q5W188 147 aa2.54□□□□□ -2
CKS1BP2-201ENST00000497342 KIAA0895LQ68EN5 471 aa2.54□□□□□ -2
CKS1BP2-201ENST00000497342 PLEKHA7Q6IQ23 1121 aa2.54□□□□□ -2
CKS1BP2-201ENST00000497342 TRAT1Q6PIZ9 186 aa2.54□□□□□ -2
CKS1BP2-201ENST00000497342 LINC00696Q6ZRV3 163 aa2.54□□□□□ -2
CKS1BP2-201ENST00000497342 PTCHD4Q6ZW05 846 aa2.54□□□□□ -2
CKS1BP2-201ENST00000497342 USP51Q70EK9 711 aa2.54□□□□□ -2
CKS1BP2-201ENST00000497342 ERN2Q76MJ5 926 aaKnown RBP2.54□□□□□ -2
CKS1BP2-201ENST00000497342 SLC46A3Q7Z3Q1 461 aa2.54□□□□□ -2
CKS1BP2-201ENST00000497342 PIWIL3Q7Z3Z3 882 aaKnown RBP2.54□□□□□ -2
CKS1BP2-201ENST00000497342 PLEKHH3Q7Z736 793 aa2.54□□□□□ -2
CKS1BP2-201ENST00000497342 IQCA1Q86XH1 822 aa2.54□□□□□ -2
CKS1BP2-201ENST00000497342 LINC00346Q8IVM7 164 aa2.54□□□□□ -2
CKS1BP2-201ENST00000497342 MAPKAPK5Q8IW41 473 aa2.54□□□□□ -2
CKS1BP2-201ENST00000497342 UNC45BQ8IWX7 931 aa2.54□□□□□ -2
CKS1BP2-201ENST00000497342 LMNTD2Q8IXW0 634 aa2.54□□□□□ -2
CKS1BP2-201ENST00000497342 RNF168Q8IYW5 571 aaPredicted RBP2.54□□□□□ -2
CKS1BP2-201ENST00000497342 ADGRF3Q8IZF5 1079 aa2.54□□□□□ -2
CKS1BP2-201ENST00000497342 ANKRD35Q8N283 1001 aa2.54□□□□□ -2
CKS1BP2-201ENST00000497342 ZNF619Q8N2I2 560 aa2.54□□□□□ -2
CKS1BP2-201ENST00000497342 TMEM132CQ8N3T6 1108 aa2.54□□□□□ -2
CKS1BP2-201ENST00000497342 LNX2Q8N448 690 aa2.54□□□□□ -2
CKS1BP2-201ENST00000497342 ARL6IP6Q8N6S5 226 aa2.54□□□□□ -2
CKS1BP2-201ENST00000497342 TP53I13Q8NBR0 393 aaPredicted RBP2.54□□□□□ -2
CKS1BP2-201ENST00000497342 FBXO15Q8NCQ5 510 aaPredicted RBP2.54□□□□□ -2
CKS1BP2-201ENST00000497342 CADM4Q8NFZ8 388 aa2.54□□□□□ -2
CKS1BP2-201ENST00000497342 FIBINQ8TAL6 211 aa2.54□□□□□ -2
CKS1BP2-201ENST00000497342 TRPC4APQ8TEL6 797 aa2.54□□□□□ -2
CKS1BP2-201ENST00000497342 PTPMT1Q8WUK0 201 aaPredicted RBP2.54□□□□□ -2
CKS1BP2-201ENST00000497342 SNX19Q92543 992 aa2.54□□□□□ -2
CKS1BP2-201ENST00000497342 SNX21Q969T3 373 aa2.54□□□□□ -2
CKS1BP2-201ENST00000497342 MIEF2Q96C03 454 aa2.54□□□□□ -2
CKS1BP2-201ENST00000497342 TMCO6Q96DC7 493 aa2.54□□□□□ -2
CKS1BP2-201ENST00000497342 EDC3Q96F86 508 aaKnown RBP2.54□□□□□ -2
CKS1BP2-201ENST00000497342 VPS50Q96JG6 964 aa2.54□□□□□ -2
CKS1BP2-201ENST00000497342 C1orf74Q96LT6 269 aa2.54□□□□□ -2
CKS1BP2-201ENST00000497342 DGAT2Q96PD7 388 aa2.54□□□□□ -2
CKS1BP2-201ENST00000497342 GCNAQ96QF7 691 aa2.54□□□□□ -2
CKS1BP2-201ENST00000497342 SPAG5Q96R06 1193 aa2.54□□□□□ -2
CKS1BP2-201ENST00000497342 TGS1Q96RS0 853 aaKnown RBP2.54□□□□□ -2
CKS1BP2-201ENST00000497342 SEPT5Q99719 369 aaPredicted RBP2.54□□□□□ -2
CKS1BP2-201ENST00000497342 CITED2Q99967 270 aaPredicted RBP2.54□□□□□ -2
CKS1BP2-201ENST00000497342 PLA2G12BQ9BX93 195 aa2.54□□□□□ -2
CKS1BP2-201ENST00000497342 ZNF341Q9BYN7 854 aa2.54□□□□□ -2
CKS1BP2-201ENST00000497342 XPO4Q9C0E2 1151 aaKnown RBP2.54□□□□□ -2
CKS1BP2-201ENST00000497342 CTDSP1Q9GZU7 261 aa2.54□□□□□ -2
CKS1BP2-201ENST00000497342 IKZF4Q9H2S9 585 aa2.54□□□□□ -2
CKS1BP2-201ENST00000497342 ST6GALNAC4Q9H4F1 302 aa2.54□□□□□ -2
CKS1BP2-201ENST00000497342 SMARCAD1Q9H4L7 1026 aa2.54□□□□□ -2
CKS1BP2-201ENST00000497342 NSUN3Q9H649 340 aaKnown RBP2.54□□□□□ -2
CKS1BP2-201ENST00000497342 SH2D4AQ9H788 454 aa2.54□□□□□ -2
CKS1BP2-201ENST00000497342 SFXN1Q9H9B4 322 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms