RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 KIZQ2M2Z5 673 aa9.07□□□□□ -0.96
HPS4-217ENST00000496385 PNCKQ6P2M8 343 aa9.07□□□□□ -0.96
HPS4-217ENST00000496385 TMEM270Q6UE05 265 aa9.07□□□□□ -0.96
HPS4-217ENST00000496385 ZNF534Q76KX8 674 aa9.07□□□□□ -0.96
HPS4-217ENST00000496385 CHST15Q7LFX5 561 aaPredicted RBP9.07□□□□□ -0.96
HPS4-217ENST00000496385 OTOP3Q7RTS5 596 aa9.07□□□□□ -0.96
HPS4-217ENST00000496385 BEND7Q8N7W2 519 aaPredicted RBP9.07□□□□□ -0.96
HPS4-217ENST00000496385 HDAC10Q969S8 669 aa9.07□□□□□ -0.96
HPS4-217ENST00000496385 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.07□□□□□ -0.96
HPS4-217ENST00000496385 ELMO2Q96JJ3 720 aa9.07□□□□□ -0.96
HPS4-217ENST00000496385 LXNQ9BS40 222 aa9.07□□□□□ -0.96
HPS4-217ENST00000496385 PI4K2AQ9BTU6 479 aa9.07□□□□□ -0.96
HPS4-217ENST00000496385 NMRAL1Q9HBL8 299 aa9.07□□□□□ -0.96
HPS4-217ENST00000496385 SNX15Q9NRS6 342 aa9.07□□□□□ -0.96
HPS4-217ENST00000496385 DDX28Q9NUL7 540 aaKnown RBP9.07□□□□□ -0.96
HPS4-217ENST00000496385 DTLQ9NZJ0 730 aa9.07□□□□□ -0.96
HPS4-217ENST00000496385 ABCD2Q9UBJ2 740 aa9.07□□□□□ -0.96
HPS4-217ENST00000496385 TBX20Q9UMR3 447 aa9.07□□□□□ -0.96
HPS4-217ENST00000496385 AURKCQ9UQB9 309 aa9.07□□□□□ -0.96
HPS4-217ENST00000496385 MTF2Q9Y483 593 aaPredicted RBP9.07□□□□□ -0.96
HPS4-217ENST00000496385 PTCH2Q9Y6C5 1203 aa9.07□□□□□ -0.96
HPS4-217ENST00000496385 CCDC78A2IDD5 438 aa9.07□□□□□ -0.96
HPS4-217ENST00000496385 ARHGAP33O14559 1287 aa9.07□□□□□ -0.96
HPS4-217ENST00000496385 PDPK1O15530 556 aa9.07□□□□□ -0.96
HPS4-217ENST00000496385 KCNN4O15554 427 aa9.07□□□□□ -0.96
HPS4-217ENST00000496385 NRP2O60462 931 aa9.07□□□□□ -0.96
HPS4-217ENST00000496385 PIGNO95427 931 aa9.07□□□□□ -0.96
HPS4-217ENST00000496385 CLIC3O95833 236 aa9.07□□□□□ -0.96
HPS4-217ENST00000496385 HPRP00739 348 aa9.07□□□□□ -0.96
HPS4-217ENST00000496385 TFE3P19532 575 aaPredicted RBP9.07□□□□□ -0.96
HPS4-217ENST00000496385 ATP6V1B2P21281 511 aa9.07□□□□□ -0.96
HPS4-217ENST00000496385 IL1R2P27930 398 aa9.07□□□□□ -0.96
HPS4-217ENST00000496385 YAP1P46937 504 aaKnown RBP9.07□□□□□ -0.96
HPS4-217ENST00000496385 ZNF132P52740 706 aa9.07□□□□□ -0.96
HPS4-217ENST00000496385 UBXN2AP68543 259 aa9.07□□□□□ -0.96
HPS4-217ENST00000496385 TSPY1Q01534 308 aa9.07□□□□□ -0.96
HPS4-217ENST00000496385 BAATQ14032 418 aaPredicted RBP9.07□□□□□ -0.96
HPS4-217ENST00000496385 FRG1Q14331 258 aaKnown RBP9.07□□□□□ -0.96
HPS4-217ENST00000496385 MAPK11Q15759 364 aa9.07□□□□□ -0.96
HPS4-217ENST00000496385 SNAP47Q5SQN1 464 aa9.07□□□□□ -0.96
HPS4-217ENST00000496385 DESI1Q6ICB0 168 aa9.07□□□□□ -0.96
HPS4-217ENST00000496385 ZYG11AQ6WRX3 759 aa9.07□□□□□ -0.96
HPS4-217ENST00000496385 R3HCC1LQ7Z5L2 792 aaKnown RBP9.07□□□□□ -0.96
HPS4-217ENST00000496385 GLRX5Q86SX6 157 aa9.07□□□□□ -0.96
HPS4-217ENST00000496385 DPP9Q86TI2 863 aa9.07□□□□□ -0.96
HPS4-217ENST00000496385 SNX29P2Q8IUI4 249 aa9.07□□□□□ -0.96
HPS4-217ENST00000496385 ADGRG5Q8IZF4 528 aa9.07□□□□□ -0.96
HPS4-217ENST00000496385 C8orf59Q8N0T1 100 aaPredicted RBP9.07□□□□□ -0.96
HPS4-217ENST00000496385 CCDC185Q8N715 623 aa9.07□□□□□ -0.96
HPS4-217ENST00000496385 GTF3C2Q8WUA4 911 aaPredicted RBP9.07□□□□□ -0.96
HPS4-217ENST00000496385 CLEC4DQ8WXI8 215 aa9.07□□□□□ -0.96
HPS4-217ENST00000496385 MUS81Q96NY9 551 aa9.07□□□□□ -0.96
HPS4-217ENST00000496385 GDF15Q99988 308 aa9.07□□□□□ -0.96
HPS4-217ENST00000496385 BDH2Q9BUT1 245 aa9.07□□□□□ -0.96
HPS4-217ENST00000496385 RPRD1BQ9NQG5 326 aaKnown RBP9.07□□□□□ -0.96
HPS4-217ENST00000496385 POLE4Q9NR33 117 aa9.07□□□□□ -0.96
HPS4-217ENST00000496385 ARHGAP28Q9P2N2 729 aa9.07□□□□□ -0.96
HPS4-217ENST00000496385 PDE10AQ9Y233 779 aa9.07□□□□□ -0.96
HPS4-217ENST00000496385 ANKRD6Q9Y2G4 727 aa9.07□□□□□ -0.96
HPS4-217ENST00000496385 PLXNB2O15031 1838 aa9.07□□□□□ -0.96
HPS4-217ENST00000496385 TRIM16O95361 564 aa9.07□□□□□ -0.96
HPS4-217ENST00000496385 LYPLA2O95372 231 aa9.07□□□□□ -0.96
HPS4-217ENST00000496385 LDLRP01130 860 aa9.07□□□□□ -0.96
HPS4-217ENST00000496385 HLA-DRAP01903 254 aa9.07□□□□□ -0.96
HPS4-217ENST00000496385 PGAM1P18669 254 aa9.07□□□□□ -0.96
HPS4-217ENST00000496385 ACVR2AP27037 513 aa9.07□□□□□ -0.96
HPS4-217ENST00000496385 RALGDSQ12967 914 aa9.07□□□□□ -0.96
HPS4-217ENST00000496385 KCTD2Q14681 263 aa9.07□□□□□ -0.96
HPS4-217ENST00000496385 PLCL1Q15111 1095 aa9.07□□□□□ -0.96
HPS4-217ENST00000496385 ARL13AQ5H913 290 aaPredicted RBP9.07□□□□□ -0.96
HPS4-217ENST00000496385 C6orf141Q5SZD1 244 aa9.07□□□□□ -0.96
HPS4-217ENST00000496385 STEAP3Q658P3 488 aa9.07□□□□□ -0.96
HPS4-217ENST00000496385 TMEM198Q66K66 360 aa9.07□□□□□ -0.96
HPS4-217ENST00000496385 XKRXQ6PP77 449 aa9.07□□□□□ -0.96
HPS4-217ENST00000496385 CCBE1Q6UXH8 406 aaPredicted RBP9.07□□□□□ -0.96
HPS4-217ENST00000496385 GK5Q6ZS86 529 aa9.07□□□□□ -0.96
HPS4-217ENST00000496385 UBQLNLQ8IYU4 475 aa9.07□□□□□ -0.96
HPS4-217ENST00000496385 SMG8Q8ND04 991 aaKnown RBP9.07□□□□□ -0.96
HPS4-217ENST00000496385 NPLOC4Q8TAT6 608 aa9.07□□□□□ -0.96
HPS4-217ENST00000496385 MAGEE2Q8TD90 523 aaPredicted RBP9.07□□□□□ -0.96
HPS4-217ENST00000496385 RIT2Q99578 217 aa9.07□□□□□ -0.96
HPS4-217ENST00000496385 TEKT3Q9BXF9 490 aa9.07□□□□□ -0.96
HPS4-217ENST00000496385 CALN1Q9BXU9 219 aa9.07□□□□□ -0.96
HPS4-217ENST00000496385 ACAD9Q9H845 621 aa9.07□□□□□ -0.96
HPS4-217ENST00000496385 EHMT1Q9H9B1 1298 aa9.07□□□□□ -0.96
HPS4-217ENST00000496385 LRRC4Q9HBW1 653 aa9.07□□□□□ -0.96
HPS4-217ENST00000496385 MTMR10Q9NXD2 777 aa9.07□□□□□ -0.96
HPS4-217ENST00000496385 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.07□□□□□ -0.96
HPS4-217ENST00000496385 H0Y626 953 aa9.06□□□□□ -0.96
HPS4-217ENST00000496385 NPHS1O60500 1241 aa9.06□□□□□ -0.96
HPS4-217ENST00000496385 MRPS14O60783 128 aaKnown RBP9.06□□□□□ -0.96
HPS4-217ENST00000496385 DDHD2O94830 711 aa9.06□□□□□ -0.96
HPS4-217ENST00000496385 ARHGEF15O94989 841 aa9.06□□□□□ -0.96
HPS4-217ENST00000496385 SNAP29O95721 258 aa9.06□□□□□ -0.96
HPS4-217ENST00000496385 C4BPAP04003 597 aaKnown RBP9.06□□□□□ -0.96
HPS4-217ENST00000496385 PCMT1P22061 227 aa9.06□□□□□ -0.96
HPS4-217ENST00000496385 RIPPLY1Q0D2K3 151 aa9.06□□□□□ -0.96
HPS4-217ENST00000496385 FASTKQ14296 549 aaKnown RBP9.06□□□□□ -0.96
HPS4-217ENST00000496385 PSMD5Q16401 504 aa9.06□□□□□ -0.96
HPS4-217ENST00000496385 PCSK7Q16549 785 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms