RNA–Protein interactions for RNA: ENST00000496189.1

SF3A1-209, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-209ENST00000496189 ELOCQ15369 112 aa16.36■□□□□ 0.21
SF3A1-209ENST00000496189 CCDC157Q569K6 752 aa16.36■□□□□ 0.21
SF3A1-209ENST00000496189 PRRT3Q5FWE3 981 aa16.36■□□□□ 0.21
SF3A1-209ENST00000496189 Q6ZVL8 140 aa16.36■□□□□ 0.21
SF3A1-209ENST00000496189 RD3Q7Z3Z2 195 aa16.36■□□□□ 0.21
SF3A1-209ENST00000496189 HSD11B1LQ7Z5J1 315 aa16.36■□□□□ 0.21
SF3A1-209ENST00000496189 TSPAN33Q86UF1 283 aa16.36■□□□□ 0.21
SF3A1-209ENST00000496189 HID1Q8IV36 788 aa16.36■□□□□ 0.21
SF3A1-209ENST00000496189 NRSN1Q8IZ57 195 aa16.36■□□□□ 0.21
SF3A1-209ENST00000496189 ZNF567Q8N184 647 aa16.36■□□□□ 0.21
SF3A1-209ENST00000496189 FSTL5Q8N475 847 aaPredicted RBP16.36■□□□□ 0.21
SF3A1-209ENST00000496189 ZNF548Q8NEK5 533 aaPredicted RBP16.36■□□□□ 0.21
SF3A1-209ENST00000496189 OR4C6Q8NH72 309 aa16.36■□□□□ 0.21
SF3A1-209ENST00000496189 SPATA22Q8NHS9 363 aa16.36■□□□□ 0.21
SF3A1-209ENST00000496189 LMX1AQ8TE12 382 aa16.36■□□□□ 0.21
SF3A1-209ENST00000496189 AP2M1Q96CW1 435 aa16.36■□□□□ 0.21
SF3A1-209ENST00000496189 TRIM44Q96DX7 344 aaPredicted RBP16.36■□□□□ 0.21
SF3A1-209ENST00000496189 TBATAQ96M53 351 aa16.36■□□□□ 0.21
SF3A1-209ENST00000496189 FCRL5Q96RD9 977 aa16.36■□□□□ 0.21
SF3A1-209ENST00000496189 LYSMD1Q96S90 227 aa16.36■□□□□ 0.21
SF3A1-209ENST00000496189 NAP1L3Q99457 506 aaPredicted RBP16.36■□□□□ 0.21
SF3A1-209ENST00000496189 UBP1Q9NZI7 540 aa16.36■□□□□ 0.21
SF3A1-209ENST00000496189 MOSPD1Q9UJG1 213 aa16.36■□□□□ 0.21
SF3A1-209ENST00000496189 ZKSCAN5Q9Y2L8 839 aa16.36■□□□□ 0.21
SF3A1-209ENST00000496189 CSNK1G3Q9Y6M4 447 aa16.36■□□□□ 0.21
SF3A1-209ENST00000496189 KNL1Q8NG31 2342 aa16.35■□□□□ 0.21
SF3A1-209ENST00000496189 CNOT1A5YKK6 2376 aaKnown RBP16.35■□□□□ 0.21
SF3A1-209ENST00000496189 SCAMP1O15126 338 aa16.35■□□□□ 0.21
SF3A1-209ENST00000496189 NDST3O95803 873 aa16.35■□□□□ 0.21
SF3A1-209ENST00000496189 MT-CYBP00156 380 aaPredicted RBP16.35■□□□□ 0.21
SF3A1-209ENST00000496189 PRLP01236 227 aa16.35■□□□□ 0.21
SF3A1-209ENST00000496189 TNFP01375 233 aa16.35■□□□□ 0.21
SF3A1-209ENST00000496189 ANXA6P08133 673 aa16.35■□□□□ 0.21
SF3A1-209ENST00000496189 HOXC4P09017 264 aaPredicted RBP16.35■□□□□ 0.21
SF3A1-209ENST00000496189 MYCLP1P12525 358 aaPredicted RBP16.35■□□□□ 0.21
SF3A1-209ENST00000496189 CXCR5P32302 372 aa16.35■□□□□ 0.21
SF3A1-209ENST00000496189 DUSP3P51452 185 aaPredicted RBP16.35■□□□□ 0.21
SF3A1-209ENST00000496189 GEMP55040 296 aa16.35■□□□□ 0.21
SF3A1-209ENST00000496189 SRP54P61011 504 aaKnown RBP16.35■□□□□ 0.21
SF3A1-209ENST00000496189 MPP3Q13368 585 aa16.35■□□□□ 0.21
SF3A1-209ENST00000496189 QPCTQ16769 361 aa16.35■□□□□ 0.21
SF3A1-209ENST00000496189 LONRF2Q1L5Z9 754 aa16.35■□□□□ 0.21
SF3A1-209ENST00000496189 ZNF765Q7L2R6 523 aa16.35■□□□□ 0.21
SF3A1-209ENST00000496189 PLA2G15Q8NCC3 412 aa16.35■□□□□ 0.21
SF3A1-209ENST00000496189 OR56A4Q8NGH8 313 aa16.35■□□□□ 0.21
SF3A1-209ENST00000496189 GPR63Q9BZJ6 419 aa16.35■□□□□ 0.21
SF3A1-209ENST00000496189 HOMER3Q9NSC5 361 aa16.35■□□□□ 0.21
SF3A1-209ENST00000496189 AAR2Q9Y312 384 aaKnown RBP16.35■□□□□ 0.21
SF3A1-209ENST00000496189 LRRK1Q38SD2 2015 aa16.35■□□□□ 0.21
SF3A1-209ENST00000496189 RGSL1A5PLK6 1076 aa16.34■□□□□ 0.21
SF3A1-209ENST00000496189 TNFRSF10CO14798 259 aa16.34■□□□□ 0.21
SF3A1-209ENST00000496189 CLDN7O95471 211 aa16.34■□□□□ 0.21
SF3A1-209ENST00000496189 FGGP02679 453 aa16.34■□□□□ 0.21
SF3A1-209ENST00000496189 C1SP09871 688 aa16.34■□□□□ 0.21
SF3A1-209ENST00000496189 CKMT2P17540 419 aa16.34■□□□□ 0.21
SF3A1-209ENST00000496189 TEAD1P28347 426 aa16.34■□□□□ 0.21
SF3A1-209ENST00000496189 PMLP29590 882 aa16.34■□□□□ 0.21
SF3A1-209ENST00000496189 TRIM23P36406 574 aa16.34■□□□□ 0.21
SF3A1-209ENST00000496189 HK3P52790 923 aa16.34■□□□□ 0.21
SF3A1-209ENST00000496189 STC1P52823 247 aa16.34■□□□□ 0.21
SF3A1-209ENST00000496189 PTSQ03393 145 aa16.34■□□□□ 0.21
SF3A1-209ENST00000496189 DPTQ07507 201 aa16.34■□□□□ 0.21
SF3A1-209ENST00000496189 EIF2B5Q13144 721 aaKnown RBP16.34■□□□□ 0.21
SF3A1-209ENST00000496189 HEATR4Q86WZ0 1026 aa16.34■□□□□ 0.21
SF3A1-209ENST00000496189 GKN2Q86XP6 184 aa16.34■□□□□ 0.21
SF3A1-209ENST00000496189 SDR16C5Q8N3Y7 309 aa16.34■□□□□ 0.21
SF3A1-209ENST00000496189 SLC25A45Q8N413 288 aa16.34■□□□□ 0.21
SF3A1-209ENST00000496189 FUBP1Q96AE4 644 aaKnown RBP16.34■□□□□ 0.21
SF3A1-209ENST00000496189 FAM118BQ9BPY3 351 aa16.34■□□□□ 0.21
SF3A1-209ENST00000496189 CDH19Q9H159 772 aa16.34■□□□□ 0.21
SF3A1-209ENST00000496189 GBA3Q9H227 469 aa16.34■□□□□ 0.21
SF3A1-209ENST00000496189 ZFYVE1Q9HBF4 777 aa16.34■□□□□ 0.21
SF3A1-209ENST00000496189 USP29Q9HBJ7 922 aa16.34■□□□□ 0.21
SF3A1-209ENST00000496189 MAGEE1Q9HCI5 957 aa16.34■□□□□ 0.21
SF3A1-209ENST00000496189 UCKL1Q9NWZ5 548 aa16.34■□□□□ 0.21
SF3A1-209ENST00000496189 CD84Q9UIB8 345 aa16.34■□□□□ 0.21
SF3A1-209ENST00000496189 COL5A1P20908 1838 aaPredicted RBP16.33■□□□□ 0.21
SF3A1-209ENST00000496189 CABIN1Q9Y6J0 2220 aa16.33■□□□□ 0.2
SF3A1-209ENST00000496189 TCRBV7S2A1N4TA0A589 114 aa16.33■□□□□ 0.2
SF3A1-209ENST00000496189 CTAGE9A4FU28 777 aa16.33■□□□□ 0.2
SF3A1-209ENST00000496189 SIGLEC6O43699 453 aa16.33■□□□□ 0.2
SF3A1-209ENST00000496189 RFPL3O75679 317 aa16.33■□□□□ 0.2
SF3A1-209ENST00000496189 EPOP01588 193 aa16.33■□□□□ 0.2
SF3A1-209ENST00000496189 SLC4A1P02730 911 aa16.33■□□□□ 0.2
SF3A1-209ENST00000496189 ATP1A1P05023 1023 aaKnown RBP16.33■□□□□ 0.2
SF3A1-209ENST00000496189 ATXN1LP0C7T5 689 aaKnown RBP16.33■□□□□ 0.2
SF3A1-209ENST00000496189 TCP1P17987 556 aaKnown RBP16.33■□□□□ 0.2
SF3A1-209ENST00000496189 HLA-DPA1P20036 260 aa16.33■□□□□ 0.2
SF3A1-209ENST00000496189 STIP1P31948 543 aaKnown RBP16.33■□□□□ 0.2
SF3A1-209ENST00000496189 ACTN2P35609 894 aa16.33■□□□□ 0.2
SF3A1-209ENST00000496189 RPIAP49247 311 aa16.33■□□□□ 0.2
SF3A1-209ENST00000496189 WNT3AP56704 352 aa16.33■□□□□ 0.2
SF3A1-209ENST00000496189 ANKRD20A2Q5SQ80 823 aa16.33■□□□□ 0.2
SF3A1-209ENST00000496189 TPRG1LQ5T0D9 272 aa16.33■□□□□ 0.2
SF3A1-209ENST00000496189 ANKRD20A1Q5TYW2 823 aa16.33■□□□□ 0.2
SF3A1-209ENST00000496189 ANKRD20A3Q5VUR7 823 aa16.33■□□□□ 0.2
SF3A1-209ENST00000496189 ZCCHC8Q6NZY4 707 aaKnown RBP16.33■□□□□ 0.2
SF3A1-209ENST00000496189 KDM7AQ6ZMT4 941 aa16.33■□□□□ 0.2
SF3A1-209ENST00000496189 ARHGEF18Q6ZSZ5 1173 aa16.33■□□□□ 0.2
SF3A1-209ENST00000496189 KANSL1Q7Z3B3 1105 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms