RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 NMT1P30419 496 aaKnown RBP6.78□□□□□ -1.32
VIM-207ENST00000495528 MPLP40238 635 aa6.78□□□□□ -1.32
VIM-207ENST00000495528 STAT6P42226 847 aa6.78□□□□□ -1.32
VIM-207ENST00000495528 TUFMP49411 452 aaKnown RBP6.78□□□□□ -1.32
VIM-207ENST00000495528 SLC12A3P55017 1021 aa6.78□□□□□ -1.32
VIM-207ENST00000495528 SHC2P98077 582 aa6.78□□□□□ -1.32
VIM-207ENST00000495528 GRSF1Q12849 480 aaKnown RBP eCLIP6.78□□□□□ -1.32
VIM-207ENST00000495528 PLK5Q496M5 336 aa6.78□□□□□ -1.32
VIM-207ENST00000495528 HYIQ5T013 277 aa6.78□□□□□ -1.32
VIM-207ENST00000495528 DCAF12L1Q5VU92 463 aa6.78□□□□□ -1.32
VIM-207ENST00000495528 C9orf57Q5W0N0 161 aa6.78□□□□□ -1.32
VIM-207ENST00000495528 JADE1Q6IE81 842 aa6.78□□□□□ -1.32
VIM-207ENST00000495528 TCEAL6Q6IPX3 200 aa6.78□□□□□ -1.32
VIM-207ENST00000495528 KRBA2Q6ZNG9 492 aa6.78□□□□□ -1.32
VIM-207ENST00000495528 Q6ZPA2 131 aa6.78□□□□□ -1.32
VIM-207ENST00000495528 TMEM150AQ86TG1 271 aa6.78□□□□□ -1.32
VIM-207ENST00000495528 CEP57L1Q8IYX8 460 aa6.78□□□□□ -1.32
VIM-207ENST00000495528 CMTM8Q8IZV2 173 aa6.78□□□□□ -1.32
VIM-207ENST00000495528 USP13Q92995 863 aaPredicted RBP6.78□□□□□ -1.32
VIM-207ENST00000495528 TCEAL3Q969E4 200 aa6.78□□□□□ -1.32
VIM-207ENST00000495528 FUBP1Q96AE4 644 aaKnown RBP6.78□□□□□ -1.32
VIM-207ENST00000495528 BICD1Q96G01 975 aa6.78□□□□□ -1.32
VIM-207ENST00000495528 ZC3H10Q96K80 434 aaKnown RBP6.78□□□□□ -1.32
VIM-207ENST00000495528 DPH1Q9BZG8 443 aa6.78□□□□□ -1.32
VIM-207ENST00000495528 ZCWPW1Q9H0M4 648 aa6.78□□□□□ -1.32
VIM-207ENST00000495528 NUP62CLQ9H1M0 184 aa6.78□□□□□ -1.32
VIM-207ENST00000495528 RPF1Q9H9Y2 349 aaKnown RBP6.78□□□□□ -1.32
VIM-207ENST00000495528 VPS45Q9NRW7 570 aa6.78□□□□□ -1.32
VIM-207ENST00000495528 KCTD5Q9NXV2 234 aa6.78□□□□□ -1.32
VIM-207ENST00000495528 DMTF1Q9Y222 760 aa6.78□□□□□ -1.32
VIM-207ENST00000495528 CCL26Q9Y258 94 aa6.78□□□□□ -1.32
VIM-207ENST00000495528 CHD8Q9HCK8 2581 aa6.77□□□□□ -1.33
VIM-207ENST00000495528 ANO9A1A5B4 782 aa6.77□□□□□ -1.33
VIM-207ENST00000495528 GRID2IPA4D2P6 1211 aa6.77□□□□□ -1.33
VIM-207ENST00000495528 TMEM191CA6NGB0 347 aa6.77□□□□□ -1.33
VIM-207ENST00000495528 CYB561D2O14569 222 aa6.77□□□□□ -1.33
VIM-207ENST00000495528 OGTO15294 1046 aa6.77□□□□□ -1.33
VIM-207ENST00000495528 PMM2O15305 246 aa6.77□□□□□ -1.33
VIM-207ENST00000495528 HAPLN1P10915 354 aaPredicted RBP6.77□□□□□ -1.33
VIM-207ENST00000495528 ARSAP15289 507 aa6.77□□□□□ -1.33
VIM-207ENST00000495528 HMGA1P17096 107 aaKnown RBP6.77□□□□□ -1.33
VIM-207ENST00000495528 AVPR1AP37288 418 aa6.77□□□□□ -1.33
VIM-207ENST00000495528 AVPR1BP47901 424 aa6.77□□□□□ -1.33
VIM-207ENST00000495528 LIG4P49917 911 aa6.77□□□□□ -1.33
VIM-207ENST00000495528 RPS16P62249 146 aaKnown RBP6.77□□□□□ -1.33
VIM-207ENST00000495528 VEPH1Q14D04 833 aa6.77□□□□□ -1.33
VIM-207ENST00000495528 TAF12Q16514 161 aa6.77□□□□□ -1.33
VIM-207ENST00000495528 KYAT1Q16773 422 aa6.77□□□□□ -1.33
VIM-207ENST00000495528 ARHGAP40Q5TG30 622 aa6.77□□□□□ -1.33
VIM-207ENST00000495528 HECTD2Q5U5R9 776 aa6.77□□□□□ -1.33
VIM-207ENST00000495528 SDHAF4Q5VUM1 108 aa6.77□□□□□ -1.33
VIM-207ENST00000495528 WSCD1Q658N2 575 aa6.77□□□□□ -1.33
VIM-207ENST00000495528 TXNDC8Q6A555 127 aa6.77□□□□□ -1.33
VIM-207ENST00000495528 CAVIN1Q6NZI2 390 aaKnown RBP6.77□□□□□ -1.33
VIM-207ENST00000495528 SLC39A4Q6P5W5 647 aa6.77□□□□□ -1.33
VIM-207ENST00000495528 THEM5Q8N1Q8 247 aa6.77□□□□□ -1.33
VIM-207ENST00000495528 LNX2Q8N448 690 aa6.77□□□□□ -1.33
VIM-207ENST00000495528 MAB21L3Q8N8X9 362 aa6.77□□□□□ -1.33
VIM-207ENST00000495528 STKLD1Q8NE28 680 aa6.77□□□□□ -1.33
VIM-207ENST00000495528 MYCBPAPQ8TBZ2 947 aa6.77□□□□□ -1.33
VIM-207ENST00000495528 LRRC15Q8TF66 581 aa6.77□□□□□ -1.33
VIM-207ENST00000495528 PAGE5Q96GU1 130 aa6.77□□□□□ -1.33
VIM-207ENST00000495528 FBXL20Q96IG2 436 aa6.77□□□□□ -1.33
VIM-207ENST00000495528 TIGD1Q96MW7 591 aa6.77□□□□□ -1.33
VIM-207ENST00000495528 MOGAT1Q96PD6 335 aa6.77□□□□□ -1.33
VIM-207ENST00000495528 GCNAQ96QF7 691 aa6.77□□□□□ -1.33
VIM-207ENST00000495528 TSPAN18Q96SJ8 248 aa6.77□□□□□ -1.33
VIM-207ENST00000495528 ACTRT3Q9BYD9 372 aa6.77□□□□□ -1.33
VIM-207ENST00000495528 ZNF518BQ9C0D4 1074 aa6.77□□□□□ -1.33
VIM-207ENST00000495528 TMPRSS5Q9H3S3 457 aa6.77□□□□□ -1.33
VIM-207ENST00000495528 BLOC1S4Q9NUP1 217 aa6.77□□□□□ -1.33
VIM-207ENST00000495528 TMLHEQ9NVH6 421 aa6.77□□□□□ -1.33
VIM-207ENST00000495528 LARSQ9P2J5 1176 aaKnown RBP6.77□□□□□ -1.33
VIM-207ENST00000495528 CPSF3Q9UKF6 684 aaKnown RBP6.77□□□□□ -1.33
VIM-207ENST00000495528 TBX20Q9UMR3 447 aa6.77□□□□□ -1.33
VIM-207ENST00000495528 PCDHGA5Q9Y5G8 931 aa6.77□□□□□ -1.33
VIM-207ENST00000495528 ANTXRLA6NF34 631 aa6.76□□□□□ -1.33
VIM-207ENST00000495528 C4orf47A7E2U8 309 aa6.76□□□□□ -1.33
VIM-207ENST00000495528 RHPN2P1A8MT19 583 aa6.76□□□□□ -1.33
VIM-207ENST00000495528 ANKRD63C9JTQ0 380 aa6.76□□□□□ -1.33
VIM-207ENST00000495528 H0YCG3 227 aa6.76□□□□□ -1.33
VIM-207ENST00000495528 HNRNPDLO14979 420 aaKnown RBP6.76□□□□□ -1.33
VIM-207ENST00000495528 YY2O15391 372 aa6.76□□□□□ -1.33
VIM-207ENST00000495528 PEX1O43933 1283 aa6.76□□□□□ -1.33
VIM-207ENST00000495528 AKAP3O75969 853 aa6.76□□□□□ -1.33
VIM-207ENST00000495528 PIGRP01833 764 aa6.76□□□□□ -1.33
VIM-207ENST00000495528 PROS1P07225 676 aa6.76□□□□□ -1.33
VIM-207ENST00000495528 CHRM2P08172 466 aa6.76□□□□□ -1.33
VIM-207ENST00000495528 PDHA1P08559 390 aa6.76□□□□□ -1.33
VIM-207ENST00000495528 DRD1P21728 446 aa6.76□□□□□ -1.33
VIM-207ENST00000495528 PAX3P23760 479 aa6.76□□□□□ -1.33
VIM-207ENST00000495528 CASP1P29466 404 aa6.76□□□□□ -1.33
VIM-207ENST00000495528 ACOT2P49753 483 aa6.76□□□□□ -1.33
VIM-207ENST00000495528 LOXL3P58215 753 aa6.76□□□□□ -1.33
VIM-207ENST00000495528 CREB5Q02930 508 aa6.76□□□□□ -1.33
VIM-207ENST00000495528 BFSP1Q12934 665 aa6.76□□□□□ -1.33
VIM-207ENST00000495528 HLTFQ14527 1009 aaKnown RBP eCLIP6.76□□□□□ -1.33
VIM-207ENST00000495528 TMEM132DQ14C87 1099 aa6.76□□□□□ -1.33
VIM-207ENST00000495528 KLHL40Q2TBA0 621 aa6.76□□□□□ -1.33
VIM-207ENST00000495528 TMEM119Q4V9L6 283 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms