RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 TAF1AQ15573 450 aaPredicted RBP17.08■□□□□ 0.32
HDAC6-235ENST00000495515 IL27RAQ6UWB1 636 aa17.08■□□□□ 0.32
HDAC6-235ENST00000495515 GCNT7Q6ZNI0 430 aa17.08■□□□□ 0.32
HDAC6-235ENST00000495515 ABI3BPQ7Z7G0 1075 aa17.08■□□□□ 0.32
HDAC6-235ENST00000495515 NLRP8Q86W28 1048 aa17.08■□□□□ 0.32
HDAC6-235ENST00000495515 JAMLQ86YT9 394 aa17.08■□□□□ 0.32
HDAC6-235ENST00000495515 OR52K1Q8NGK4 314 aa17.08■□□□□ 0.32
HDAC6-235ENST00000495515 AP2M1Q96CW1 435 aa17.08■□□□□ 0.32
HDAC6-235ENST00000495515 FAM83DQ9H4H8 585 aa17.08■□□□□ 0.32
HDAC6-235ENST00000495515 GPR179Q6PRD1 2367 aa17.08■□□□□ 0.32
HDAC6-235ENST00000495515 SDK1Q7Z5N4 2213 aa17.08■□□□□ 0.32
HDAC6-235ENST00000495515 A0A1W2PR77 199 aa17.07■□□□□ 0.32
HDAC6-235ENST00000495515 FAM187AA6NFU0 413 aa17.07■□□□□ 0.32
HDAC6-235ENST00000495515 GOLGA8CPA6NN73 597 aa17.07■□□□□ 0.32
HDAC6-235ENST00000495515 ESPNB1AK53 854 aa17.07■□□□□ 0.32
HDAC6-235ENST00000495515 TLR4O00206 839 aa17.07■□□□□ 0.32
HDAC6-235ENST00000495515 STX7O15400 261 aaKnown RBP17.07■□□□□ 0.32
HDAC6-235ENST00000495515 PCCBP05166 539 aa17.07■□□□□ 0.32
HDAC6-235ENST00000495515 THEGLP0DJG4 465 aa17.07■□□□□ 0.32
HDAC6-235ENST00000495515 TSHRP16473 764 aa17.07■□□□□ 0.32
HDAC6-235ENST00000495515 GM2AP17900 193 aa17.07■□□□□ 0.32
HDAC6-235ENST00000495515 LPOP22079 712 aaPredicted RBP17.07■□□□□ 0.32
HDAC6-235ENST00000495515 MAGEA6P43360 314 aa17.07■□□□□ 0.32
HDAC6-235ENST00000495515 CLDN2P57739 230 aa17.07■□□□□ 0.32
HDAC6-235ENST00000495515 CCDC6Q16204 474 aa17.07■□□□□ 0.32
HDAC6-235ENST00000495515 ESRP1Q6NXG1 681 aaKnown RBP17.07■□□□□ 0.32
HDAC6-235ENST00000495515 PTAR1Q7Z6K3 402 aaPredicted RBP17.07■□□□□ 0.32
HDAC6-235ENST00000495515 CAPN10Q9HC96 672 aa17.07■□□□□ 0.32
HDAC6-235ENST00000495515 CASS4Q9NQ75 786 aa17.07■□□□□ 0.32
HDAC6-235ENST00000495515 MBNL1Q9NR56 388 aaKnown RBP17.07■□□□□ 0.32
HDAC6-235ENST00000495515 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.07■□□□□ 0.32
HDAC6-235ENST00000495515 CA5BQ9Y2D0 317 aa17.07■□□□□ 0.32
HDAC6-235ENST00000495515 SLCO1B1Q9Y6L6 691 aa17.07■□□□□ 0.32
HDAC6-235ENST00000495515 FAM186AA6NE01 2351 aa17.07■□□□□ 0.32
HDAC6-235ENST00000495515 A0A0U1RQS6 177 aa17.06■□□□□ 0.32
HDAC6-235ENST00000495515 A0A1B0GVT2 93 aa17.06■□□□□ 0.32
HDAC6-235ENST00000495515 CTAGE15A4D2H0 777 aa17.06■□□□□ 0.32
HDAC6-235ENST00000495515 POM121BA6NF01 834 aa17.06■□□□□ 0.32
HDAC6-235ENST00000495515 PATE3B3GLJ2 98 aa17.06■□□□□ 0.32
HDAC6-235ENST00000495515 ARHGAP33O14559 1287 aa17.06■□□□□ 0.32
HDAC6-235ENST00000495515 TTI1O43156 1089 aa17.06■□□□□ 0.32
HDAC6-235ENST00000495515 ZNF500O60304 480 aaPredicted RBP17.06■□□□□ 0.32
HDAC6-235ENST00000495515 CTAGE8P0CG41 777 aa17.06■□□□□ 0.32
HDAC6-235ENST00000495515 HTR1BP28222 390 aa17.06■□□□□ 0.32
HDAC6-235ENST00000495515 TEAD1P28347 426 aa17.06■□□□□ 0.32
HDAC6-235ENST00000495515 IGFALSP35858 605 aa17.06■□□□□ 0.32
HDAC6-235ENST00000495515 THOP1P52888 689 aa17.06■□□□□ 0.32
HDAC6-235ENST00000495515 ATXN3P54252 364 aaPredicted RBP17.06■□□□□ 0.32
HDAC6-235ENST00000495515 TERF1P54274 439 aa17.06■□□□□ 0.32
HDAC6-235ENST00000495515 DCDC1P59894 354 aa17.06■□□□□ 0.32
HDAC6-235ENST00000495515 PFN3P60673 137 aa17.06■□□□□ 0.32
HDAC6-235ENST00000495515 PTK2BQ14289 1009 aa17.06■□□□□ 0.32
HDAC6-235ENST00000495515 INPP5AQ14642 412 aa17.06■□□□□ 0.32
HDAC6-235ENST00000495515 KCNJ11Q14654 390 aa17.06■□□□□ 0.32
HDAC6-235ENST00000495515 DNTTIP2Q5QJE6 756 aaKnown RBP17.06■□□□□ 0.32
HDAC6-235ENST00000495515 RAET1GQ6H3X3 334 aa17.06■□□□□ 0.32
HDAC6-235ENST00000495515 PNCKQ6P2M8 343 aa17.06■□□□□ 0.32
HDAC6-235ENST00000495515 Q6ZSR6 202 aa17.06■□□□□ 0.32
HDAC6-235ENST00000495515 CTAGE6Q86UF2 777 aa17.06■□□□□ 0.32
HDAC6-235ENST00000495515 CTAGE4Q8IX94 777 aa17.06■□□□□ 0.32
HDAC6-235ENST00000495515 PPIL6Q8IXY8 311 aa17.06■□□□□ 0.32
HDAC6-235ENST00000495515 TTC30BQ8N4P2 665 aa17.06■□□□□ 0.32
HDAC6-235ENST00000495515 CEP112Q8N8E3 955 aa17.06■□□□□ 0.32
HDAC6-235ENST00000495515 CPT1BQ92523 772 aa17.06■□□□□ 0.32
HDAC6-235ENST00000495515 BMFQ96LC9 184 aa17.06■□□□□ 0.32
HDAC6-235ENST00000495515 C19orf43Q9BQ61 176 aa17.06■□□□□ 0.32
HDAC6-235ENST00000495515 ABCG8Q9H221 673 aa17.06■□□□□ 0.32
HDAC6-235ENST00000495515 GDF3Q9NR23 364 aa17.06■□□□□ 0.32
HDAC6-235ENST00000495515 BFARQ9NZS9 450 aa17.06■□□□□ 0.32
HDAC6-235ENST00000495515 IL17CQ9P0M4 197 aa17.06■□□□□ 0.32
HDAC6-235ENST00000495515 NFKBIL1Q9UBC1 381 aaPredicted RBP17.06■□□□□ 0.32
HDAC6-235ENST00000495515 CD84Q9UIB8 345 aa17.06■□□□□ 0.32
HDAC6-235ENST00000495515 ANKRD6Q9Y2G4 727 aa17.06■□□□□ 0.32
HDAC6-235ENST00000495515 TRPM6Q9BX84 2022 aa17.06■□□□□ 0.32
HDAC6-235ENST00000495515 HEATR9A2RTY3 570 aa17.05■□□□□ 0.32
HDAC6-235ENST00000495515 H0Y8X5 98 aa17.05■□□□□ 0.32
HDAC6-235ENST00000495515 SMAPO00193 183 aa17.05■□□□□ 0.32
HDAC6-235ENST00000495515 CACNB4O00305 520 aaPredicted RBP17.05■□□□□ 0.32
HDAC6-235ENST00000495515 DNALI1O14645 258 aaPredicted RBP17.05■□□□□ 0.32
HDAC6-235ENST00000495515 AURKAO14965 403 aa17.05■□□□□ 0.32
HDAC6-235ENST00000495515 WNT1P04628 370 aa17.05■□□□□ 0.32
HDAC6-235ENST00000495515 TPH1P17752 444 aa17.05■□□□□ 0.32
HDAC6-235ENST00000495515 GPR1P46091 355 aa17.05■□□□□ 0.32
HDAC6-235ENST00000495515 NPY2RP49146 381 aa17.05■□□□□ 0.32
HDAC6-235ENST00000495515 NXPH1P58417 271 aa17.05■□□□□ 0.32
HDAC6-235ENST00000495515 IRX4P78413 519 aa17.05■□□□□ 0.32
HDAC6-235ENST00000495515 SEPT6Q14141 434 aa17.05■□□□□ 0.32
HDAC6-235ENST00000495515 POU6F1Q14863 301 aa17.05■□□□□ 0.32
HDAC6-235ENST00000495515 LRRC8BQ6P9F7 803 aa17.05■□□□□ 0.32
HDAC6-235ENST00000495515 NLRP9Q7RTR0 991 aa17.05■□□□□ 0.32
HDAC6-235ENST00000495515 DCLK2Q8N568 766 aa17.05■□□□□ 0.32
HDAC6-235ENST00000495515 OXR1Q8N573 874 aa17.05■□□□□ 0.32
HDAC6-235ENST00000495515 BBOF1Q8ND07 529 aa17.05■□□□□ 0.32
HDAC6-235ENST00000495515 MCUQ8NE86 351 aa17.05■□□□□ 0.32
HDAC6-235ENST00000495515 OR13H1Q8NG92 308 aa17.05■□□□□ 0.32
HDAC6-235ENST00000495515 EID2BQ96D98 161 aa17.05■□□□□ 0.32
HDAC6-235ENST00000495515 PLEKHG4BQ96PX9 1271 aa17.05■□□□□ 0.32
HDAC6-235ENST00000495515 RIOK2Q9BVS4 552 aaKnown RBP17.05■□□□□ 0.32
HDAC6-235ENST00000495515 SMOC1Q9H4F8 434 aa17.05■□□□□ 0.32
HDAC6-235ENST00000495515 WDR26Q9H7D7 661 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms