RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 GDF3Q9NR23 364 aa19.41■□□□□ 0.7
HDAC4-212ENST00000495497 RAB6BQ9NRW1 208 aa19.41■□□□□ 0.7
HDAC4-212ENST00000495497 PIH1D1Q9NWS0 290 aaKnown RBP19.41■□□□□ 0.7
HDAC4-212ENST00000495497 FNDC3AQ9Y2H6 1198 aaKnown RBP19.41■□□□□ 0.7
HDAC4-212ENST00000495497 OR1A2Q9Y585 309 aa19.41■□□□□ 0.7
HDAC4-212ENST00000495497 DNAH14Q0VDD8 3507 aa19.41■□□□□ 0.7
HDAC4-212ENST00000495497 PI4KAP42356 2102 aa19.4■□□□□ 0.7
HDAC4-212ENST00000495497 GOLGA6CA6NDK9 693 aa19.4■□□□□ 0.7
HDAC4-212ENST00000495497 GOLGA6BA6NDN3 693 aa19.4■□□□□ 0.7
HDAC4-212ENST00000495497 BUD23O43709 281 aaKnown RBP19.4■□□□□ 0.7
HDAC4-212ENST00000495497 AP2A1O95782 977 aa19.4■□□□□ 0.7
HDAC4-212ENST00000495497 GOLGA6DP0CG33 693 aa19.4■□□□□ 0.7
HDAC4-212ENST00000495497 FDFT1P37268 417 aa19.4■□□□□ 0.7
HDAC4-212ENST00000495497 RABIFP47224 123 aa19.4■□□□□ 0.7
HDAC4-212ENST00000495497 OVGP1Q12889 678 aa19.4■□□□□ 0.7
HDAC4-212ENST00000495497 ZNF423Q2M1K9 1284 aa19.4■□□□□ 0.7
HDAC4-212ENST00000495497 ZNF542PQ5EBM4 170 aa19.4■□□□□ 0.7
HDAC4-212ENST00000495497 PNCKQ6P2M8 343 aa19.4■□□□□ 0.7
HDAC4-212ENST00000495497 IL27RAQ6UWB1 636 aa19.4■□□□□ 0.7
HDAC4-212ENST00000495497 TMC3Q7Z5M5 1100 aa19.4■□□□□ 0.7
HDAC4-212ENST00000495497 CCHCR1Q8TD31 782 aa19.4■□□□□ 0.7
HDAC4-212ENST00000495497 APOOQ9BUR5 198 aa19.4■□□□□ 0.7
HDAC4-212ENST00000495497 LRRC40Q9H9A6 602 aa19.4■□□□□ 0.7
HDAC4-212ENST00000495497 BPIFA1Q9NP55 256 aa19.4■□□□□ 0.7
HDAC4-212ENST00000495497 GPR27Q9NS67 375 aa19.4■□□□□ 0.7
HDAC4-212ENST00000495497 GOLGA6AQ9NYA3 693 aa19.4■□□□□ 0.7
HDAC4-212ENST00000495497 PTPRZ1P23471 2315 aaPredicted RBP19.4■□□□□ 0.7
HDAC4-212ENST00000495497 GVINP1Q7Z2Y8 2422 aa19.39■□□□□ 0.69
HDAC4-212ENST00000495497 GOLGA6L10A0A0M3HER8 536 aa19.39■□□□□ 0.69
HDAC4-212ENST00000495497 MAGEC1O60732 1142 aa19.39■□□□□ 0.69
HDAC4-212ENST00000495497 CER1O95813 267 aa19.39■□□□□ 0.69
HDAC4-212ENST00000495497 KRT14P02533 472 aa19.39■□□□□ 0.69
HDAC4-212ENST00000495497 TPH1P17752 444 aa19.39■□□□□ 0.69
HDAC4-212ENST00000495497 SPINT3P49223 89 aa19.39■□□□□ 0.69
HDAC4-212ENST00000495497 LMAN1P49257 510 aa19.39■□□□□ 0.69
HDAC4-212ENST00000495497 VPS41P49754 854 aa19.39■□□□□ 0.69
HDAC4-212ENST00000495497 MTM1Q13496 603 aa19.39■□□□□ 0.69
HDAC4-212ENST00000495497 FZD2Q14332 565 aa19.39■□□□□ 0.69
HDAC4-212ENST00000495497 ESRP1Q6NXG1 681 aaKnown RBP19.39■□□□□ 0.69
HDAC4-212ENST00000495497 GLT6D1Q7Z4J2 308 aa19.39■□□□□ 0.69
HDAC4-212ENST00000495497 TTC30BQ8N4P2 665 aa19.39■□□□□ 0.69
HDAC4-212ENST00000495497 FAM174AQ8TBP5 190 aa19.39■□□□□ 0.69
HDAC4-212ENST00000495497 AP2M1Q96CW1 435 aa19.39■□□□□ 0.69
HDAC4-212ENST00000495497 ELF4Q99607 663 aaPredicted RBP19.39■□□□□ 0.69
HDAC4-212ENST00000495497 RIOK2Q9BVS4 552 aaKnown RBP19.39■□□□□ 0.69
HDAC4-212ENST00000495497 DDX47Q9H0S4 455 aaKnown RBP19.39■□□□□ 0.69
HDAC4-212ENST00000495497 PKD2L2Q9NZM6 624 aa19.39■□□□□ 0.69
HDAC4-212ENST00000495497 ZNF292O60281 2723 aa19.39■□□□□ 0.69
HDAC4-212ENST00000495497 E7EVH7 732 aa19.38■□□□□ 0.69
HDAC4-212ENST00000495497 PSMD3O43242 534 aa19.38■□□□□ 0.69
HDAC4-212ENST00000495497 GRIA1P42261 906 aa19.38■□□□□ 0.69
HDAC4-212ENST00000495497 BASP1P80723 227 aaKnown RBP19.38■□□□□ 0.69
HDAC4-212ENST00000495497 ARHGAP8P85298 464 aa19.38■□□□□ 0.69
HDAC4-212ENST00000495497 MSLNQ13421 630 aaPredicted RBP19.38■□□□□ 0.69
HDAC4-212ENST00000495497 SEMA5AQ13591 1074 aa19.38■□□□□ 0.69
HDAC4-212ENST00000495497 PTPRCAPQ14761 206 aa19.38■□□□□ 0.69
HDAC4-212ENST00000495497 SHBQ15464 509 aa19.38■□□□□ 0.69
HDAC4-212ENST00000495497 RSPO4Q2I0M5 234 aaPredicted RBP19.38■□□□□ 0.69
HDAC4-212ENST00000495497 ALS2CLQ60I27 953 aa19.38■□□□□ 0.69
HDAC4-212ENST00000495497 RAET1GQ6H3X3 334 aa19.38■□□□□ 0.69
HDAC4-212ENST00000495497 NRSN1Q8IZ57 195 aa19.38■□□□□ 0.69
HDAC4-212ENST00000495497 GPR26Q8NDV2 337 aa19.38■□□□□ 0.69
HDAC4-212ENST00000495497 NETO1Q8TDF5 533 aa19.38■□□□□ 0.69
HDAC4-212ENST00000495497 FUBP1Q96AE4 644 aaKnown RBP19.38■□□□□ 0.69
HDAC4-212ENST00000495497 LGR4Q9BXB1 951 aa19.38■□□□□ 0.69
HDAC4-212ENST00000495497 DNAAF2Q9NVR5 837 aaKnown RBP19.38■□□□□ 0.69
HDAC4-212ENST00000495497 PNMA8BQ9ULN7 279 aaPredicted RBP19.38■□□□□ 0.69
HDAC4-212ENST00000495497 KCTD3Q9Y597 815 aa19.38■□□□□ 0.69
HDAC4-212ENST00000495497 ARL5AQ9Y689 179 aa19.38■□□□□ 0.69
HDAC4-212ENST00000495497 SPTY2D1-AS1A0A0U1RR47 76 aa19.37■□□□□ 0.69
HDAC4-212ENST00000495497 SOD1P00441 154 aa19.37■□□□□ 0.69
HDAC4-212ENST00000495497 TRIM23P36406 574 aa19.37■□□□□ 0.69
HDAC4-212ENST00000495497 PAFAH1B1P43034 410 aa19.37■□□□□ 0.69
HDAC4-212ENST00000495497 GPR1P46091 355 aa19.37■□□□□ 0.69
HDAC4-212ENST00000495497 FNTAP49354 379 aa19.37■□□□□ 0.69
HDAC4-212ENST00000495497 THOP1P52888 689 aa19.37■□□□□ 0.69
HDAC4-212ENST00000495497 YPEL5P62699 121 aa19.37■□□□□ 0.69
HDAC4-212ENST00000495497 BNIP3Q12983 259 aa19.37■□□□□ 0.69
HDAC4-212ENST00000495497 EIF2B5Q13144 721 aaKnown RBP19.37■□□□□ 0.69
HDAC4-212ENST00000495497 ZNF765Q7L2R6 523 aa19.37■□□□□ 0.69
HDAC4-212ENST00000495497 DCP2Q8IU60 420 aaKnown RBP19.37■□□□□ 0.69
HDAC4-212ENST00000495497 KLHL7Q8IXQ5 586 aa19.37■□□□□ 0.69
HDAC4-212ENST00000495497 OR52K1Q8NGK4 314 aa19.37■□□□□ 0.69
HDAC4-212ENST00000495497 FAM83DQ9H4H8 585 aa19.37■□□□□ 0.69
HDAC4-212ENST00000495497 TRABDQ9H4I3 376 aa19.37■□□□□ 0.69
HDAC4-212ENST00000495497 ARNT2Q9HBZ2 717 aa19.37■□□□□ 0.69
HDAC4-212ENST00000495497 TM7SF3Q9NS93 570 aa19.37■□□□□ 0.69
HDAC4-212ENST00000495497 KCTD5Q9NXV2 234 aa19.37■□□□□ 0.69
HDAC4-212ENST00000495497 NEU2Q9Y3R4 380 aa19.37■□□□□ 0.69
HDAC4-212ENST00000495497 A0A1B0GTQ1 180 aa19.36■□□□□ 0.69
HDAC4-212ENST00000495497 SDC3O75056 442 aa19.36■□□□□ 0.69
HDAC4-212ENST00000495497 APRTP07741 180 aa19.36■□□□□ 0.69
HDAC4-212ENST00000495497 TSHRP16473 764 aa19.36■□□□□ 0.69
HDAC4-212ENST00000495497 BPIP17213 487 aa19.36■□□□□ 0.69
HDAC4-212ENST00000495497 LIMK1P53667 647 aa19.36■□□□□ 0.69
HDAC4-212ENST00000495497 DPTQ07507 201 aa19.36■□□□□ 0.69
HDAC4-212ENST00000495497 GPS1Q13098 491 aa19.36■□□□□ 0.69
HDAC4-212ENST00000495497 KCTD16Q68DU8 428 aa19.36■□□□□ 0.69
HDAC4-212ENST00000495497 ENPP7Q6UWV6 458 aa19.36■□□□□ 0.69
HDAC4-212ENST00000495497 HEATR4Q86WZ0 1026 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms