RNA–Protein interactions for RNA: ENST00000494893.5

SNX17-209, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 966 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-209ENST00000494893 UCKL1Q9NWZ5 548 aa17.12■□□□□ 0.33
SNX17-209ENST00000494893 FAM153AQ9UHL3 310 aa17.12■□□□□ 0.33
SNX17-209ENST00000494893 DNPEPQ9ULA0 475 aa17.12■□□□□ 0.33
SNX17-209ENST00000494893 OR1A2Q9Y585 309 aa17.12■□□□□ 0.33
SNX17-209ENST00000494893 SPAARA0A1B0GVQ0 90 aa17.11■□□□□ 0.33
SNX17-209ENST00000494893 LOC285095A0A1B0GVY8 99 aa17.11■□□□□ 0.33
SNX17-209ENST00000494893 MED19A0JLT2 244 aaPredicted RBP17.11■□□□□ 0.33
SNX17-209ENST00000494893 FLRT2O43155 660 aa17.11■□□□□ 0.33
SNX17-209ENST00000494893 NDST3O95803 873 aa17.11■□□□□ 0.33
SNX17-209ENST00000494893 SOD1P00441 154 aa17.11■□□□□ 0.33
SNX17-209ENST00000494893 FGGP02679 453 aa17.11■□□□□ 0.33
SNX17-209ENST00000494893 GIMD1P0DJR0 217 aa17.11■□□□□ 0.33
SNX17-209ENST00000494893 CEACAM1P13688 526 aa17.11■□□□□ 0.33
SNX17-209ENST00000494893 TRIM23P36406 574 aa17.11■□□□□ 0.33
SNX17-209ENST00000494893 CHRNA4P43681 627 aa17.11■□□□□ 0.33
SNX17-209ENST00000494893 ARRB1P49407 418 aaPredicted RBP17.11■□□□□ 0.33
SNX17-209ENST00000494893 ARHGEF7Q14155 803 aa17.11■□□□□ 0.33
SNX17-209ENST00000494893 OASLQ15646 514 aaKnown RBP17.11■□□□□ 0.33
SNX17-209ENST00000494893 MNS1Q8NEH6 495 aa17.11■□□□□ 0.33
SNX17-209ENST00000494893 IFT43Q96FT9 208 aa17.11■□□□□ 0.33
SNX17-209ENST00000494893 SPATA13Q96N96 652 aa17.11■□□□□ 0.33
SNX17-209ENST00000494893 NAP1L3Q99457 506 aaPredicted RBP17.11■□□□□ 0.33
SNX17-209ENST00000494893 CARD6Q9BX69 1037 aa17.11■□□□□ 0.33
SNX17-209ENST00000494893 ABCG8Q9H221 673 aa17.11■□□□□ 0.33
SNX17-209ENST00000494893 SMARCAL1Q9NZC9 954 aa17.11■□□□□ 0.33
SNX17-209ENST00000494893 RSPH14Q9UHP6 348 aa17.11■□□□□ 0.33
SNX17-209ENST00000494893 CD84Q9UIB8 345 aa17.11■□□□□ 0.33
SNX17-209ENST00000494893 SPO11Q9Y5K1 396 aa17.11■□□□□ 0.33
SNX17-209ENST00000494893 C5orf60A6NFR6 353 aa17.1■□□□□ 0.33
SNX17-209ENST00000494893 TOR1BO14657 336 aa17.1■□□□□ 0.33
SNX17-209ENST00000494893 YKT6O15498 198 aa17.1■□□□□ 0.33
SNX17-209ENST00000494893 LIASO43766 372 aa17.1■□□□□ 0.33
SNX17-209ENST00000494893 PIAS2O75928 621 aa17.1■□□□□ 0.33
SNX17-209ENST00000494893 CSF2P04141 144 aa17.1■□□□□ 0.33
SNX17-209ENST00000494893 NME1P15531 152 aaKnown RBP17.1■□□□□ 0.33
SNX17-209ENST00000494893 ZNF30P17039 623 aa17.1■□□□□ 0.33
SNX17-209ENST00000494893 DGKAP23743 735 aa17.1■□□□□ 0.33
SNX17-209ENST00000494893 NFKBIAP25963 317 aa17.1■□□□□ 0.33
SNX17-209ENST00000494893 PSMB4P28070 264 aa17.1■□□□□ 0.33
SNX17-209ENST00000494893 OLIG2Q13516 323 aa17.1■□□□□ 0.33
SNX17-209ENST00000494893 NFATC4Q14934 902 aa17.1■□□□□ 0.33
SNX17-209ENST00000494893 LONRF2Q1L5Z9 754 aa17.1■□□□□ 0.33
SNX17-209ENST00000494893 PNCKQ6P2M8 343 aa17.1■□□□□ 0.33
SNX17-209ENST00000494893 MACC1Q6ZN28 852 aa17.1■□□□□ 0.33
SNX17-209ENST00000494893 LYSMD3Q7Z3D4 306 aa17.1■□□□□ 0.33
SNX17-209ENST00000494893 PARGQ86W56 976 aa17.1■□□□□ 0.33
SNX17-209ENST00000494893 KLHDC8BQ8IXV7 354 aa17.1■□□□□ 0.33
SNX17-209ENST00000494893 RBFAQ8N0V3 343 aa17.1■□□□□ 0.33
SNX17-209ENST00000494893 NDUFAF2Q8N183 169 aa17.1■□□□□ 0.33
SNX17-209ENST00000494893 FAM71DQ8N9W8 422 aa17.1■□□□□ 0.33
SNX17-209ENST00000494893 SETD7Q8WTS6 366 aaKnown RBP17.1■□□□□ 0.33
SNX17-209ENST00000494893 SCAMP4Q969E2 229 aa17.1■□□□□ 0.33
SNX17-209ENST00000494893 AGAP2Q99490 1192 aa17.1■□□□□ 0.33
SNX17-209ENST00000494893 TMEM121Q9BTD3 319 aa17.1■□□□□ 0.33
SNX17-209ENST00000494893 LGR4Q9BXB1 951 aa17.1■□□□□ 0.33
SNX17-209ENST00000494893 ADGRE3Q9BY15 652 aa17.1■□□□□ 0.33
SNX17-209ENST00000494893 DNAJC28Q9NX36 388 aa17.1■□□□□ 0.33
SNX17-209ENST00000494893 CABIN1Q9Y6J0 2220 aa17.1■□□□□ 0.33
SNX17-209ENST00000494893 CNOT1A5YKK6 2376 aaKnown RBP17.1■□□□□ 0.33
SNX17-209ENST00000494893 C1orf232A0A0U1RR37 186 aa17.09■□□□□ 0.33
SNX17-209ENST00000494893 TMEM202A6NGA9 273 aa17.09■□□□□ 0.33
SNX17-209ENST00000494893 AURKAO14965 403 aa17.09■□□□□ 0.33
SNX17-209ENST00000494893 ITGAVP06756 1048 aa17.09■□□□□ 0.33
SNX17-209ENST00000494893 KCNA4P22459 653 aa17.09■□□□□ 0.33
SNX17-209ENST00000494893 ADRA1AP35348 466 aa17.09■□□□□ 0.33
SNX17-209ENST00000494893 GRK6P43250 576 aa17.09■□□□□ 0.33
SNX17-209ENST00000494893 THOP1P52888 689 aa17.09■□□□□ 0.33
SNX17-209ENST00000494893 SUZ12Q15022 739 aaKnown RBP17.09■□□□□ 0.33
SNX17-209ENST00000494893 SIRPB2Q5JXA9 342 aa17.09■□□□□ 0.33
SNX17-209ENST00000494893 N4BP2L1Q5TBK1 243 aaPredicted RBP17.09■□□□□ 0.33
SNX17-209ENST00000494893 ERMP1Q7Z2K6 904 aa17.09■□□□□ 0.33
SNX17-209ENST00000494893 RHBDD1Q8TEB9 315 aa17.09■□□□□ 0.33
SNX17-209ENST00000494893 C1orf54Q8WWF1 131 aa17.09■□□□□ 0.33
SNX17-209ENST00000494893 SLC32A1Q9H598 525 aa17.09■□□□□ 0.33
SNX17-209ENST00000494893 SPTBN2O15020 2390 aa17.09■□□□□ 0.33
SNX17-209ENST00000494893 CTAGE15A4D2H0 777 aa17.08■□□□□ 0.32
SNX17-209ENST00000494893 SLU7O95391 586 aaKnown RBP17.08■□□□□ 0.32
SNX17-209ENST00000494893 METTL18O95568 372 aa17.08■□□□□ 0.32
SNX17-209ENST00000494893 AGTP01019 485 aa17.08■□□□□ 0.32
SNX17-209ENST00000494893 EPOP01588 193 aa17.08■□□□□ 0.32
SNX17-209ENST00000494893 HOXC4P09017 264 aaPredicted RBP17.08■□□□□ 0.32
SNX17-209ENST00000494893 CTAGE8P0CG41 777 aa17.08■□□□□ 0.32
SNX17-209ENST00000494893 SPINT3P49223 89 aa17.08■□□□□ 0.32
SNX17-209ENST00000494893 KIAA1024LP59773 190 aa17.08■□□□□ 0.32
SNX17-209ENST00000494893 DPTQ07507 201 aa17.08■□□□□ 0.32
SNX17-209ENST00000494893 MPP3Q13368 585 aa17.08■□□□□ 0.32
SNX17-209ENST00000494893 TRIP6Q15654 476 aaKnown RBP17.08■□□□□ 0.32
SNX17-209ENST00000494893 ALG11Q2TAA5 492 aa17.08■□□□□ 0.32
SNX17-209ENST00000494893 ITPRIPL1Q6GPH6 555 aa17.08■□□□□ 0.32
SNX17-209ENST00000494893 ZNF765Q7L2R6 523 aa17.08■□□□□ 0.32
SNX17-209ENST00000494893 GLRX5Q86SX6 157 aa17.08■□□□□ 0.32
SNX17-209ENST00000494893 CTAGE6Q86UF2 777 aa17.08■□□□□ 0.32
SNX17-209ENST00000494893 CTAGE4Q8IX94 777 aa17.08■□□□□ 0.32
SNX17-209ENST00000494893 SLC25A41Q8N5S1 370 aa17.08■□□□□ 0.32
SNX17-209ENST00000494893 EID2Q8N6I1 236 aa17.08■□□□□ 0.32
SNX17-209ENST00000494893 SPATA4Q8NEY3 305 aa17.08■□□□□ 0.32
SNX17-209ENST00000494893 IPMKQ8NFU5 416 aa17.08■□□□□ 0.32
SNX17-209ENST00000494893 MAIP1Q8WWC4 291 aa17.08■□□□□ 0.32
SNX17-209ENST00000494893 OR1E3Q8WZA6 343 aa17.08■□□□□ 0.32
SNX17-209ENST00000494893 TSACCQ96A04 125 aaPredicted RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms