RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 KNL1Q8NG31 2342 aa15.92■□□□□ 0.14
LIME1-209ENST00000494776 LRRK1Q38SD2 2015 aa15.91■□□□□ 0.14
LIME1-209ENST00000494776 K7ESM1 405 aa15.91■□□□□ 0.14
LIME1-209ENST00000494776 ZSCAN12O43309 604 aa15.91■□□□□ 0.14
LIME1-209ENST00000494776 AQP9O43315 295 aa15.91■□□□□ 0.14
LIME1-209ENST00000494776 ANXA9O76027 345 aa15.91■□□□□ 0.14
LIME1-209ENST00000494776 RASGRP1O95267 797 aa15.91■□□□□ 0.14
LIME1-209ENST00000494776 SLC4A1P02730 911 aa15.91■□□□□ 0.14
LIME1-209ENST00000494776 C1SP09871 688 aa15.91■□□□□ 0.14
LIME1-209ENST00000494776 FTH1P19P0C7X4 201 aa15.91■□□□□ 0.14
LIME1-209ENST00000494776 PIRTP0C851 137 aa15.91■□□□□ 0.14
LIME1-209ENST00000494776 STC1P52823 247 aa15.91■□□□□ 0.14
LIME1-209ENST00000494776 GEMP55040 296 aa15.91■□□□□ 0.14
LIME1-209ENST00000494776 SRP54P61011 504 aaKnown RBP15.91■□□□□ 0.14
LIME1-209ENST00000494776 KLF1Q13351 362 aaPredicted RBP15.91■□□□□ 0.14
LIME1-209ENST00000494776 MPP3Q13368 585 aa15.91■□□□□ 0.14
LIME1-209ENST00000494776 PRRT3Q5FWE3 981 aa15.91■□□□□ 0.14
LIME1-209ENST00000494776 ANKRD20A2Q5SQ80 823 aa15.91■□□□□ 0.14
LIME1-209ENST00000494776 ANKRD20A1Q5TYW2 823 aa15.91■□□□□ 0.14
LIME1-209ENST00000494776 ANKRD20A3Q5VUR7 823 aa15.91■□□□□ 0.14
LIME1-209ENST00000494776 KANSL1Q7Z3B3 1105 aa15.91■□□□□ 0.14
LIME1-209ENST00000494776 TECPR1Q7Z6L1 1165 aa15.91■□□□□ 0.14
LIME1-209ENST00000494776 NRSN1Q8IZ57 195 aa15.91■□□□□ 0.14
LIME1-209ENST00000494776 RBFAQ8N0V3 343 aa15.91■□□□□ 0.14
LIME1-209ENST00000494776 SLC25A41Q8N5S1 370 aa15.91■□□□□ 0.14
LIME1-209ENST00000494776 ZNF548Q8NEK5 533 aaPredicted RBP15.91■□□□□ 0.14
LIME1-209ENST00000494776 IPMKQ8NFU5 416 aa15.91■□□□□ 0.14
LIME1-209ENST00000494776 SRPK1Q96SB4 655 aaKnown RBP15.91■□□□□ 0.14
LIME1-209ENST00000494776 GPR63Q9BZJ6 419 aa15.91■□□□□ 0.14
LIME1-209ENST00000494776 ABCG8Q9H221 673 aa15.91■□□□□ 0.14
LIME1-209ENST00000494776 CAAP1Q9H8G2 361 aa15.91■□□□□ 0.14
LIME1-209ENST00000494776 ZFYVE1Q9HBF4 777 aa15.91■□□□□ 0.14
LIME1-209ENST00000494776 MAGEE1Q9HCI5 957 aa15.91■□□□□ 0.14
LIME1-209ENST00000494776 DOLKQ9UPQ8 538 aa15.91■□□□□ 0.14
LIME1-209ENST00000494776 SHOC2Q9UQ13 582 aa15.91■□□□□ 0.14
LIME1-209ENST00000494776 TPRP12270 2363 aaKnown RBP15.9■□□□□ 0.14
LIME1-209ENST00000494776 TCRBV7S2A1N4TA0A589 114 aa15.9■□□□□ 0.14
LIME1-209ENST00000494776 ENC1O14682 589 aa15.9■□□□□ 0.14
LIME1-209ENST00000494776 SCAMP1O15126 338 aa15.9■□□□□ 0.14
LIME1-209ENST00000494776 TRIM16O95361 564 aa15.9■□□□□ 0.14
LIME1-209ENST00000494776 TNFP01375 233 aa15.9■□□□□ 0.14
LIME1-209ENST00000494776 PYGLP06737 847 aa15.9■□□□□ 0.14
LIME1-209ENST00000494776 HOXC4P09017 264 aaPredicted RBP15.9■□□□□ 0.14
LIME1-209ENST00000494776 ATXN1LP0C7T5 689 aaKnown RBP15.9■□□□□ 0.14
LIME1-209ENST00000494776 MYCLP1P12525 358 aaPredicted RBP15.9■□□□□ 0.14
LIME1-209ENST00000494776 TRIM23P36406 574 aa15.9■□□□□ 0.14
LIME1-209ENST00000494776 HK3P52790 923 aa15.9■□□□□ 0.14
LIME1-209ENST00000494776 KIAA1024LP59773 190 aa15.9■□□□□ 0.14
LIME1-209ENST00000494776 DPTQ07507 201 aa15.9■□□□□ 0.14
LIME1-209ENST00000494776 C1orf61Q13536 156 aa15.9■□□□□ 0.14
LIME1-209ENST00000494776 ALG11Q2TAA5 492 aa15.9■□□□□ 0.14
LIME1-209ENST00000494776 KDELC1Q6UW63 502 aa15.9■□□□□ 0.14
LIME1-209ENST00000494776 ARHGEF18Q6ZSZ5 1173 aa15.9■□□□□ 0.14
LIME1-209ENST00000494776 RFLNAQ6ZTI6 216 aa15.9■□□□□ 0.14
LIME1-209ENST00000494776 LYSMD3Q7Z3D4 306 aa15.9■□□□□ 0.14
LIME1-209ENST00000494776 HEATR4Q86WZ0 1026 aa15.9■□□□□ 0.14
LIME1-209ENST00000494776 SLC13A5Q86YT5 568 aaPredicted RBP15.9■□□□□ 0.14
LIME1-209ENST00000494776 PELI3Q8N2H9 469 aa15.9■□□□□ 0.14
LIME1-209ENST00000494776 PNPLA1Q8N8W4 532 aa15.9■□□□□ 0.14
LIME1-209ENST00000494776 FAM71DQ8N9W8 422 aa15.9■□□□□ 0.14
LIME1-209ENST00000494776 OR56A4Q8NGH8 313 aa15.9■□□□□ 0.14
LIME1-209ENST00000494776 OR4C6Q8NH72 309 aa15.9■□□□□ 0.14
LIME1-209ENST00000494776 CCDC110Q8TBZ0 833 aa15.9■□□□□ 0.14
LIME1-209ENST00000494776 SCAMP4Q969E2 229 aa15.9■□□□□ 0.14
LIME1-209ENST00000494776 OXNAD1Q96HP4 312 aaPredicted RBP15.9■□□□□ 0.14
LIME1-209ENST00000494776 SPATA13Q96N96 652 aa15.9■□□□□ 0.14
LIME1-209ENST00000494776 DUSP23Q9BVJ7 150 aa15.9■□□□□ 0.14
LIME1-209ENST00000494776 LGR4Q9BXB1 951 aa15.9■□□□□ 0.14
LIME1-209ENST00000494776 CARD9Q9H257 536 aa15.9■□□□□ 0.14
LIME1-209ENST00000494776 TCEAL2Q9H3H9 227 aaPredicted RBP15.9■□□□□ 0.14
LIME1-209ENST00000494776 NLGN3Q9NZ94 848 aa15.9■□□□□ 0.14
LIME1-209ENST00000494776 R3HDM2Q9Y2K5 976 aaKnown RBP15.9■□□□□ 0.14
LIME1-209ENST00000494776 AAR2Q9Y312 384 aaKnown RBP15.9■□□□□ 0.14
LIME1-209ENST00000494776 CSNK1G3Q9Y6M4 447 aa15.9■□□□□ 0.14
LIME1-209ENST00000494776 LOC285095A0A1B0GVY8 99 aa15.89■□□□□ 0.13
LIME1-209ENST00000494776 TRIM38O00635 465 aa15.89■□□□□ 0.13
LIME1-209ENST00000494776 SIGLEC6O43699 453 aa15.89■□□□□ 0.13
LIME1-209ENST00000494776 EPOP01588 193 aa15.89■□□□□ 0.13
LIME1-209ENST00000494776 PSMB4P28070 264 aa15.89■□□□□ 0.13
LIME1-209ENST00000494776 SPINT3P49223 89 aa15.89■□□□□ 0.13
LIME1-209ENST00000494776 DAB2P98082 770 aa15.89■□□□□ 0.13
LIME1-209ENST00000494776 CDK3Q00526 305 aa15.89■□□□□ 0.13
LIME1-209ENST00000494776 ELOCQ15369 112 aa15.89■□□□□ 0.13
LIME1-209ENST00000494776 CDKN3Q16667 212 aa15.89■□□□□ 0.13
LIME1-209ENST00000494776 ZNF765Q7L2R6 523 aa15.89■□□□□ 0.13
LIME1-209ENST00000494776 RAVER1Q8IY67 606 aaKnown RBP15.89■□□□□ 0.13
LIME1-209ENST00000494776 LRRC45Q96CN5 670 aa15.89■□□□□ 0.13
LIME1-209ENST00000494776 MRGPRX2Q96LB1 330 aa15.89■□□□□ 0.13
LIME1-209ENST00000494776 PPP1R2P1Q96PQ5 205 aa15.89■□□□□ 0.13
LIME1-209ENST00000494776 RIOK2Q9BVS4 552 aaKnown RBP15.89■□□□□ 0.13
LIME1-209ENST00000494776 TEX101Q9BY14 249 aa15.89■□□□□ 0.13
LIME1-209ENST00000494776 FRMD8P1Q9BZ68 369 aaPredicted RBP15.89■□□□□ 0.13
LIME1-209ENST00000494776 FAM83DQ9H4H8 585 aa15.89■□□□□ 0.13
LIME1-209ENST00000494776 USP29Q9HBJ7 922 aa15.89■□□□□ 0.13
LIME1-209ENST00000494776 ZNF711Q9Y462 761 aa15.89■□□□□ 0.13
LIME1-209ENST00000494776 RGSL1A5PLK6 1076 aa15.88■□□□□ 0.13
LIME1-209ENST00000494776 C5orf60A6NFR6 353 aa15.88■□□□□ 0.13
LIME1-209ENST00000494776 TMEM202A6NGA9 273 aa15.88■□□□□ 0.13
LIME1-209ENST00000494776 TNFRSF10CO14798 259 aa15.88■□□□□ 0.13
LIME1-209ENST00000494776 ANXA6P08133 673 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms