RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 KLK10O43240 276 aa11.63□□□□□ -0.55
VTI1A-208ENST00000494728 PROSCO94903 275 aa11.63□□□□□ -0.55
VTI1A-208ENST00000494728 TNFSF15O95150 251 aa11.63□□□□□ -0.55
VTI1A-208ENST00000494728 HLA-DQB2P05538 268 aa11.63□□□□□ -0.55
VTI1A-208ENST00000494728 HOXC4P09017 264 aaPredicted RBP11.63□□□□□ -0.55
VTI1A-208ENST00000494728 HNRNPH3P31942 346 aaKnown RBP11.63□□□□□ -0.55
VTI1A-208ENST00000494728 SERPINB6P35237 376 aa11.63□□□□□ -0.55
VTI1A-208ENST00000494728 SSR1P43307 286 aaKnown RBP11.63□□□□□ -0.55
VTI1A-208ENST00000494728 NIPAL4Q0D2K0 466 aa11.63□□□□□ -0.55
VTI1A-208ENST00000494728 SLC10A2Q12908 348 aaPredicted RBP11.63□□□□□ -0.55
VTI1A-208ENST00000494728 SRSF6Q13247 344 aaKnown RBP11.63□□□□□ -0.55
VTI1A-208ENST00000494728 PAFAH1B3Q15102 231 aaKnown RBP11.63□□□□□ -0.55
VTI1A-208ENST00000494728 ASTE1Q2TB18 679 aaPredicted RBP11.63□□□□□ -0.55
VTI1A-208ENST00000494728 C14orf28Q4W4Y0 310 aa11.63□□□□□ -0.55
VTI1A-208ENST00000494728 ANKRD20A8PQ5CZ79 823 aa11.63□□□□□ -0.55
VTI1A-208ENST00000494728 MARC1Q5VT66 337 aa11.63□□□□□ -0.55
VTI1A-208ENST00000494728 LRRC66Q68CR7 880 aa11.63□□□□□ -0.55
VTI1A-208ENST00000494728 ALG1LQ6GMV1 187 aa11.63□□□□□ -0.55
VTI1A-208ENST00000494728 OGFOD3Q6PK18 319 aa11.63□□□□□ -0.55
VTI1A-208ENST00000494728 GPR155Q7Z3F1 870 aa11.63□□□□□ -0.55
VTI1A-208ENST00000494728 TECPR1Q7Z6L1 1165 aa11.63□□□□□ -0.55
VTI1A-208ENST00000494728 CLEC14AQ86T13 490 aa11.63□□□□□ -0.55
VTI1A-208ENST00000494728 CCNJLQ8IV13 435 aa11.63□□□□□ -0.55
VTI1A-208ENST00000494728 LSMEM2Q8N112 164 aa11.63□□□□□ -0.55
VTI1A-208ENST00000494728 Q8N9G6 341 aaPredicted RBP11.63□□□□□ -0.55
VTI1A-208ENST00000494728 WDR36Q8NI36 951 aaKnown RBP11.63□□□□□ -0.55
VTI1A-208ENST00000494728 FAF2Q96CS3 445 aa11.63□□□□□ -0.55
VTI1A-208ENST00000494728 SCRN2Q96FV2 425 aa11.63□□□□□ -0.55
VTI1A-208ENST00000494728 LIN37Q96GY3 246 aaPredicted RBP11.63□□□□□ -0.55
VTI1A-208ENST00000494728 GFM1Q96RP9 751 aaKnown RBP11.63□□□□□ -0.55
VTI1A-208ENST00000494728 LRRN3Q9H3W5 708 aa11.63□□□□□ -0.55
VTI1A-208ENST00000494728 CARS2Q9HA77 564 aaKnown RBP11.63□□□□□ -0.55
VTI1A-208ENST00000494728 RCOR3Q9P2K3 495 aaPredicted RBP11.63□□□□□ -0.55
VTI1A-208ENST00000494728 PHTF1Q9UMS5 762 aa11.63□□□□□ -0.55
VTI1A-208ENST00000494728 SUFUQ9UMX1 484 aa11.63□□□□□ -0.55
VTI1A-208ENST00000494728 PPIL1Q9Y3C6 166 aa11.63□□□□□ -0.55
VTI1A-208ENST00000494728 UBR5O95071 2799 aaPredicted RBP11.62□□□□□ -0.55
VTI1A-208ENST00000494728 A0A0J9YYE9 177 aa11.62□□□□□ -0.55
VTI1A-208ENST00000494728 GOLGA6CA6NDK9 693 aa11.62□□□□□ -0.55
VTI1A-208ENST00000494728 GOLGA6BA6NDN3 693 aa11.62□□□□□ -0.55
VTI1A-208ENST00000494728 MYO1FO00160 1098 aa11.62□□□□□ -0.55
VTI1A-208ENST00000494728 TNFRSF10CO14798 259 aa11.62□□□□□ -0.55
VTI1A-208ENST00000494728 PRLP01236 227 aa11.62□□□□□ -0.55
VTI1A-208ENST00000494728 TRBC1P01850 177 aa11.62□□□□□ -0.55
VTI1A-208ENST00000494728 GOLGA6DP0CG33 693 aa11.62□□□□□ -0.55
VTI1A-208ENST00000494728 ITIH1P19827 911 aa11.62□□□□□ -0.55
VTI1A-208ENST00000494728 UGT1A5P35504 534 aa11.62□□□□□ -0.55
VTI1A-208ENST00000494728 ETV5P41161 510 aa11.62□□□□□ -0.55
VTI1A-208ENST00000494728 GNPDA1P46926 289 aa11.62□□□□□ -0.55
VTI1A-208ENST00000494728 CLN3Q13286 438 aa11.62□□□□□ -0.55
VTI1A-208ENST00000494728 ARMC12Q5T9G4 340 aa11.62□□□□□ -0.55
VTI1A-208ENST00000494728 ARHGAP40Q5TG30 622 aa11.62□□□□□ -0.55
VTI1A-208ENST00000494728 RAET1GQ6H3X3 334 aa11.62□□□□□ -0.55
VTI1A-208ENST00000494728 DOK6Q6PKX4 331 aa11.62□□□□□ -0.55
VTI1A-208ENST00000494728 C17orf82Q86X59 251 aaPredicted RBP11.62□□□□□ -0.55
VTI1A-208ENST00000494728 SLITRK4Q8IW52 837 aa11.62□□□□□ -0.55
VTI1A-208ENST00000494728 ATL2Q8NHH9 583 aa11.62□□□□□ -0.55
VTI1A-208ENST00000494728 WDR48Q8TAF3 677 aa11.62□□□□□ -0.55
VTI1A-208ENST00000494728 ARRDC2Q8TBH0 407 aa11.62□□□□□ -0.55
VTI1A-208ENST00000494728 GPBAR1Q8TDU6 330 aa11.62□□□□□ -0.55
VTI1A-208ENST00000494728 SCG3Q8WXD2 468 aaKnown RBP11.62□□□□□ -0.55
VTI1A-208ENST00000494728 SLC39A7Q92504 469 aa11.62□□□□□ -0.55
VTI1A-208ENST00000494728 RAPGEF5Q92565 580 aa11.62□□□□□ -0.55
VTI1A-208ENST00000494728 SCAMP4Q969E2 229 aa11.62□□□□□ -0.55
VTI1A-208ENST00000494728 ZNF670Q9BS34 389 aa11.62□□□□□ -0.55
VTI1A-208ENST00000494728 TDRD1Q9BXT4 1180 aaKnown RBP11.62□□□□□ -0.55
VTI1A-208ENST00000494728 BRD8Q9H0E9 1235 aa11.62□□□□□ -0.55
VTI1A-208ENST00000494728 ABCG8Q9H221 673 aa11.62□□□□□ -0.55
VTI1A-208ENST00000494728 PHPT1Q9NRX4 125 aaPredicted RBP11.62□□□□□ -0.55
VTI1A-208ENST00000494728 GOLGA6AQ9NYA3 693 aa11.62□□□□□ -0.55
VTI1A-208ENST00000494728 CTTNBP2NLQ9P2B4 639 aa11.62□□□□□ -0.55
VTI1A-208ENST00000494728 APPL1Q9UKG1 709 aa11.62□□□□□ -0.55
VTI1A-208ENST00000494728 SLC17A4Q9Y2C5 497 aa11.62□□□□□ -0.55
VTI1A-208ENST00000494728 TTLL3Q9Y4R7 772 aa11.62□□□□□ -0.55
VTI1A-208ENST00000494728 COL12A1Q99715 3063 aa11.61□□□□□ -0.55
VTI1A-208ENST00000494728 GOLGA6L19H0YKK7 550 aa11.61□□□□□ -0.55
VTI1A-208ENST00000494728 PSMD11O00231 422 aa11.61□□□□□ -0.55
VTI1A-208ENST00000494728 PLD2O14939 933 aa11.61□□□□□ -0.55
VTI1A-208ENST00000494728 MATN3O15232 486 aa11.61□□□□□ -0.55
VTI1A-208ENST00000494728 FGF1P05230 155 aa11.61□□□□□ -0.55
VTI1A-208ENST00000494728 MMP2P08253 660 aa11.61□□□□□ -0.55
VTI1A-208ENST00000494728 ITGA2BP08514 1039 aa11.61□□□□□ -0.55
VTI1A-208ENST00000494728 CYP2A6P11509 494 aaPredicted RBP11.61□□□□□ -0.55
VTI1A-208ENST00000494728 CCNB1P14635 433 aa11.61□□□□□ -0.55
VTI1A-208ENST00000494728 GLB1P16278 677 aa11.61□□□□□ -0.55
VTI1A-208ENST00000494728 KELP23276 732 aa11.61□□□□□ -0.55
VTI1A-208ENST00000494728 RBMS1P29558 406 aaKnown RBP11.61□□□□□ -0.55
VTI1A-208ENST00000494728 CCKBRP32239 447 aa11.61□□□□□ -0.55
VTI1A-208ENST00000494728 INHBCP55103 352 aa11.61□□□□□ -0.55
VTI1A-208ENST00000494728 TMPRSS3P57727 454 aa11.61□□□□□ -0.55
VTI1A-208ENST00000494728 TPM4P67936 248 aa11.61□□□□□ -0.55
VTI1A-208ENST00000494728 B4GALNT1Q00973 533 aa11.61□□□□□ -0.55
VTI1A-208ENST00000494728 PTSQ03393 145 aa11.61□□□□□ -0.55
VTI1A-208ENST00000494728 ZBTB17Q13105 803 aa11.61□□□□□ -0.55
VTI1A-208ENST00000494728 TGIF1Q15583 401 aa11.61□□□□□ -0.55
VTI1A-208ENST00000494728 SLC18A3Q16572 532 aa11.61□□□□□ -0.55
VTI1A-208ENST00000494728 RALGPS1Q5JS13 557 aa11.61□□□□□ -0.55
VTI1A-208ENST00000494728 SLC30A9Q6PML9 568 aa11.61□□□□□ -0.55
VTI1A-208ENST00000494728 NAGSQ8N159 534 aa11.61□□□□□ -0.55
VTI1A-208ENST00000494728 PLD5Q8N7P1 536 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms