RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 NLRP5P59047 1200 aa4.51□□□□□ -1.69
SMC4-224ENST00000494612 NIPAL4Q0D2K0 466 aa4.51□□□□□ -1.69
SMC4-224ENST00000494612 PRKG2Q13237 762 aa4.51□□□□□ -1.69
SMC4-224ENST00000494612 CRYMQ14894 314 aa4.51□□□□□ -1.69
SMC4-224ENST00000494612 DCAF6Q58WW2 860 aa4.51□□□□□ -1.69
SMC4-224ENST00000494612 ZNF628Q5EBL2 1059 aa4.51□□□□□ -1.69
SMC4-224ENST00000494612 DNTTIP2Q5QJE6 756 aaKnown RBP4.51□□□□□ -1.69
SMC4-224ENST00000494612 DAB2IPQ5VWQ8 1189 aa4.51□□□□□ -1.69
SMC4-224ENST00000494612 SZRD1Q7Z422 152 aa4.51□□□□□ -1.69
SMC4-224ENST00000494612 SCCPDHQ8NBX0 429 aa4.51□□□□□ -1.69
SMC4-224ENST00000494612 IGSF8Q969P0 613 aa4.51□□□□□ -1.69
SMC4-224ENST00000494612 ELMOD3Q96FG2 381 aa4.51□□□□□ -1.69
SMC4-224ENST00000494612 CALML4Q96GE6 196 aa4.51□□□□□ -1.69
SMC4-224ENST00000494612 THOC3Q96J01 351 aaKnown RBP4.51□□□□□ -1.69
SMC4-224ENST00000494612 TXNDC15Q96J42 360 aa4.51□□□□□ -1.69
SMC4-224ENST00000494612 TMEM68Q96MH6 324 aa4.51□□□□□ -1.69
SMC4-224ENST00000494612 TMEM47Q9BQJ4 181 aa4.51□□□□□ -1.69
SMC4-224ENST00000494612 HINT3Q9NQE9 182 aaKnown RBP4.51□□□□□ -1.69
SMC4-224ENST00000494612 FZD10Q9ULW2 581 aa4.51□□□□□ -1.69
SMC4-224ENST00000494612 CDC14AQ9UNH5 594 aa4.51□□□□□ -1.69
SMC4-224ENST00000494612 ERVK-11Q9UQG0 969 aa4.51□□□□□ -1.69
SMC4-224ENST00000494612 PAM16Q9Y3D7 125 aa4.51□□□□□ -1.69
SMC4-224ENST00000494612 NESP48681 1621 aa4.5□□□□□ -1.69
SMC4-224ENST00000494612 TTC3P53804 2025 aa4.5□□□□□ -1.69
SMC4-224ENST00000494612 A0A1W2PRG0 241 aa4.5□□□□□ -1.69
SMC4-224ENST00000494612 hDV102S1A0JD36 115 aa4.5□□□□□ -1.69
SMC4-224ENST00000494612 OR6C75A6NL08 312 aa4.5□□□□□ -1.69
SMC4-224ENST00000494612 TAF4O00268 1085 aa4.5□□□□□ -1.69
SMC4-224ENST00000494612 VWA5AO00534 786 aa4.5□□□□□ -1.69
SMC4-224ENST00000494612 ASAP2O43150 1006 aa4.5□□□□□ -1.69
SMC4-224ENST00000494612 HSPA12AO43301 675 aa4.5□□□□□ -1.69
SMC4-224ENST00000494612 SPRY3O43610 288 aa4.5□□□□□ -1.69
SMC4-224ENST00000494612 NDUFB4O95168 129 aa4.5□□□□□ -1.69
SMC4-224ENST00000494612 TM4SF1P30408 202 aa4.5□□□□□ -1.69
SMC4-224ENST00000494612 UBA7P41226 1012 aa4.5□□□□□ -1.69
SMC4-224ENST00000494612 NUDT6P53370 316 aa4.5□□□□□ -1.69
SMC4-224ENST00000494612 ABATP80404 500 aa4.5□□□□□ -1.69
SMC4-224ENST00000494612 DDR1Q08345 913 aa4.5□□□□□ -1.69
SMC4-224ENST00000494612 CUL4AQ13619 759 aa4.5□□□□□ -1.69
SMC4-224ENST00000494612 IRF3Q14653 427 aa4.5□□□□□ -1.69
SMC4-224ENST00000494612 WTAPQ15007 396 aa4.5□□□□□ -1.69
SMC4-224ENST00000494612 NAB2Q15742 525 aa4.5□□□□□ -1.69
SMC4-224ENST00000494612 CDONQ4KMG0 1287 aa4.5□□□□□ -1.69
SMC4-224ENST00000494612 LRIF1Q5T3J3 769 aa4.5□□□□□ -1.69
SMC4-224ENST00000494612 MTSS1LQ765P7 747 aa4.5□□□□□ -1.69
SMC4-224ENST00000494612 LINGO2Q7L985 606 aa4.5□□□□□ -1.69
SMC4-224ENST00000494612 ZC3HC1Q86WB0 502 aaKnown RBP4.5□□□□□ -1.69
SMC4-224ENST00000494612 ADHFE1Q8IWW8 467 aa4.5□□□□□ -1.69
SMC4-224ENST00000494612 SPATA6LQ8N4H0 392 aa4.5□□□□□ -1.69
SMC4-224ENST00000494612 NEXN-AS1Q8NBZ9 246 aa4.5□□□□□ -1.69
SMC4-224ENST00000494612 B4GALNT2Q8NHY0 566 aa4.5□□□□□ -1.69
SMC4-224ENST00000494612 TMEM163Q8TC26 289 aa4.5□□□□□ -1.69
SMC4-224ENST00000494612 ADAMTS14Q8WXS8 1223 aa4.5□□□□□ -1.69
SMC4-224ENST00000494612 ARHGEF26Q96DR7 871 aa4.5□□□□□ -1.69
SMC4-224ENST00000494612 FAM120BQ96EK7 910 aaKnown RBP4.5□□□□□ -1.69
SMC4-224ENST00000494612 SLC41A2Q96JW4 573 aa4.5□□□□□ -1.69
SMC4-224ENST00000494612 PPP1R13BQ96KQ4 1090 aa4.5□□□□□ -1.69
SMC4-224ENST00000494612 SLITRK1Q96PX8 696 aa4.5□□□□□ -1.69
SMC4-224ENST00000494612 FAM110AQ9BQ89 295 aa4.5□□□□□ -1.69
SMC4-224ENST00000494612 MXD3Q9BW11 206 aa4.5□□□□□ -1.69
SMC4-224ENST00000494612 KCNN2Q9H2S1 579 aa4.5□□□□□ -1.69
SMC4-224ENST00000494612 ESRP2Q9H6T0 727 aaKnown RBP4.5□□□□□ -1.69
SMC4-224ENST00000494612 MKKSQ9NPJ1 570 aaPredicted RBP4.5□□□□□ -1.69
SMC4-224ENST00000494612 MDFICQ9P1T7 246 aa4.5□□□□□ -1.69
SMC4-224ENST00000494612 SLC9A2Q9UBY0 812 aa4.5□□□□□ -1.69
SMC4-224ENST00000494612 NENFQ9UMX5 172 aa4.5□□□□□ -1.69
SMC4-224ENST00000494612 MTMR6Q9Y217 621 aa4.5□□□□□ -1.69
SMC4-224ENST00000494612 SLC45A1Q9Y2W3 748 aa4.5□□□□□ -1.69
SMC4-224ENST00000494612 MAU2Q9Y6X3 613 aa4.5□□□□□ -1.69
SMC4-224ENST00000494612 NCAPD3P42695 1498 aa4.49□□□□□ -1.69
SMC4-224ENST00000494612 THOC2Q8NI27 1593 aaKnown RBP4.49□□□□□ -1.69
SMC4-224ENST00000494612 A0A1W2PQ09 198 aa4.49□□□□□ -1.69
SMC4-224ENST00000494612 EME2A4GXA9 379 aaPredicted RBP4.49□□□□□ -1.69
SMC4-224ENST00000494612 C4orf47A7E2U8 309 aa4.49□□□□□ -1.69
SMC4-224ENST00000494612 KCNK5O95279 499 aa4.49□□□□□ -1.69
SMC4-224ENST00000494612 OR2C1O95371 312 aa4.49□□□□□ -1.69
SMC4-224ENST00000494612 RB1P06400 928 aa4.49□□□□□ -1.69
SMC4-224ENST00000494612 HOXB5P09067 269 aa4.49□□□□□ -1.69
SMC4-224ENST00000494612 PORP16435 677 aaPredicted RBP4.49□□□□□ -1.69
SMC4-224ENST00000494612 RFX2P48378 723 aa4.49□□□□□ -1.69
SMC4-224ENST00000494612 PCYT1AP49585 367 aa4.49□□□□□ -1.69
SMC4-224ENST00000494612 PSMC6P62333 389 aa4.49□□□□□ -1.69
SMC4-224ENST00000494612 PRAMEP78395 509 aa4.49□□□□□ -1.69
SMC4-224ENST00000494612 ADORA2A-AS1P86434 159 aa4.49□□□□□ -1.69
SMC4-224ENST00000494612 CDC16Q13042 620 aa4.49□□□□□ -1.69
SMC4-224ENST00000494612 CHAF1BQ13112 559 aa4.49□□□□□ -1.69
SMC4-224ENST00000494612 USP41Q3LFD5 358 aa4.49□□□□□ -1.69
SMC4-224ENST00000494612 DUSP28Q4G0W2 176 aa4.49□□□□□ -1.69
SMC4-224ENST00000494612 PAPPA-AS1Q5QFB9 102 aa4.49□□□□□ -1.69
SMC4-224ENST00000494612 TMEM198Q66K66 360 aa4.49□□□□□ -1.69
SMC4-224ENST00000494612 TMEM154Q6P9G4 183 aa4.49□□□□□ -1.69
SMC4-224ENST00000494612 GLDNQ6ZMI3 551 aaPredicted RBP4.49□□□□□ -1.69
SMC4-224ENST00000494612 C18orf65Q6ZTR6 163 aa4.49□□□□□ -1.69
SMC4-224ENST00000494612 FJX1Q86VR8 437 aa4.49□□□□□ -1.69
SMC4-224ENST00000494612 WDR63Q8IWG1 891 aa4.49□□□□□ -1.69
SMC4-224ENST00000494612 TEX11Q8IYF3 940 aa4.49□□□□□ -1.69
SMC4-224ENST00000494612 DSELQ8IZU8 1212 aa4.49□□□□□ -1.69
SMC4-224ENST00000494612 PRR26Q8N8Z3 221 aa4.49□□□□□ -1.69
SMC4-224ENST00000494612 HJURPQ8NCD3 748 aaPredicted RBP4.49□□□□□ -1.69
SMC4-224ENST00000494612 AGBL3Q8NEM8 1001 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms