RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 NAXDQ8IW45 347 aa8.24□□□□□ -1.09
RIF1-211ENST00000494333 DRC7Q8IY82 874 aa8.24□□□□□ -1.09
RIF1-211ENST00000494333 OR7D4Q8NG98 312 aa8.24□□□□□ -1.09
RIF1-211ENST00000494333 PIP4K2CQ8TBX8 421 aa8.24□□□□□ -1.09
RIF1-211ENST00000494333 SETD7Q8WTS6 366 aaKnown RBP8.24□□□□□ -1.09
RIF1-211ENST00000494333 BPIFA3Q9BQP9 254 aa8.24□□□□□ -1.09
RIF1-211ENST00000494333 ORAI3Q9BRQ5 295 aa8.24□□□□□ -1.09
RIF1-211ENST00000494333 SELENOOQ9BVL4 669 aa8.24□□□□□ -1.09
RIF1-211ENST00000494333 MAGEB5Q9BZ81 275 aa8.24□□□□□ -1.09
RIF1-211ENST00000494333 EPB41L4BQ9H329 900 aa8.24□□□□□ -1.09
RIF1-211ENST00000494333 KLHL14Q9P2G3 628 aa8.24□□□□□ -1.09
RIF1-211ENST00000494333 PPARGC1AQ9UBK2 798 aaKnown RBP8.24□□□□□ -1.09
RIF1-211ENST00000494333 VPS51Q9UID3 782 aa8.24□□□□□ -1.09
RIF1-211ENST00000494333 HS3ST2Q9Y278 367 aa8.24□□□□□ -1.09
RIF1-211ENST00000494333 TRAF6Q9Y4K3 522 aa8.24□□□□□ -1.09
RIF1-211ENST00000494333 PLXND1Q9Y4D7 1925 aa8.24□□□□□ -1.09
RIF1-211ENST00000494333 ANKRD62A6NC57 917 aa8.23□□□□□ -1.09
RIF1-211ENST00000494333 C1QTNF3-AMACRE9PGA6 284 aa8.23□□□□□ -1.09
RIF1-211ENST00000494333 FAM72CH0Y354 149 aa8.23□□□□□ -1.09
RIF1-211ENST00000494333 ALOX15BO15296 676 aa8.23□□□□□ -1.09
RIF1-211ENST00000494333 ZNF883P0CG24 379 aa8.23□□□□□ -1.09
RIF1-211ENST00000494333 TNFAIP3P21580 790 aa8.23□□□□□ -1.09
RIF1-211ENST00000494333 GPD1P21695 349 aa8.23□□□□□ -1.09
RIF1-211ENST00000494333 GLDCP23378 1020 aa8.23□□□□□ -1.09
RIF1-211ENST00000494333 CHRNA3P32297 505 aa8.23□□□□□ -1.09
RIF1-211ENST00000494333 PTPN9P43378 593 aa8.23□□□□□ -1.09
RIF1-211ENST00000494333 RECQLP46063 649 aaPredicted RBP8.23□□□□□ -1.09
RIF1-211ENST00000494333 CCR5P51681 352 aa8.23□□□□□ -1.09
RIF1-211ENST00000494333 ADPRHP54922 357 aa8.23□□□□□ -1.09
RIF1-211ENST00000494333 HDAC4P56524 1084 aa8.23□□□□□ -1.09
RIF1-211ENST00000494333 C21orf59P57076 290 aa8.23□□□□□ -1.09
RIF1-211ENST00000494333 YBX1P67809 324 aaKnown RBP8.23□□□□□ -1.09
RIF1-211ENST00000494333 GNA12Q03113 381 aa8.23□□□□□ -1.09
RIF1-211ENST00000494333 CNTN1Q12860 1018 aa8.23□□□□□ -1.09
RIF1-211ENST00000494333 KCNT1Q5JUK3 1230 aa8.23□□□□□ -1.09
RIF1-211ENST00000494333 PRAMEF14Q5SWL7 426 aa8.23□□□□□ -1.09
RIF1-211ENST00000494333 FAM72AQ5TYM5 149 aa8.23□□□□□ -1.09
RIF1-211ENST00000494333 ACAD10Q6JQN1 1059 aa8.23□□□□□ -1.09
RIF1-211ENST00000494333 FAM72DQ6L9T8 149 aa8.23□□□□□ -1.09
RIF1-211ENST00000494333 RETSATQ6NUM9 610 aa8.23□□□□□ -1.09
RIF1-211ENST00000494333 RWDD4Q6NW29 188 aaKnown RBP8.23□□□□□ -1.09
RIF1-211ENST00000494333 SCYL2Q6P3W7 929 aa8.23□□□□□ -1.09
RIF1-211ENST00000494333 RPTNQ6XPR3 784 aa8.23□□□□□ -1.09
RIF1-211ENST00000494333 DBX2Q6ZNG2 339 aa8.23□□□□□ -1.09
RIF1-211ENST00000494333 MON1BQ7L1V2 547 aa8.23□□□□□ -1.09
RIF1-211ENST00000494333 IRF2BP2Q7Z5L9 587 aa8.23□□□□□ -1.09
RIF1-211ENST00000494333 SLFN11Q7Z7L1 901 aa8.23□□□□□ -1.09
RIF1-211ENST00000494333 FAM72BQ86X60 149 aa8.23□□□□□ -1.09
RIF1-211ENST00000494333 Q8N1Y9 231 aa8.23□□□□□ -1.09
RIF1-211ENST00000494333 CCDC185Q8N715 623 aa8.23□□□□□ -1.09
RIF1-211ENST00000494333 DCAF4L2Q8NA75 395 aa8.23□□□□□ -1.09
RIF1-211ENST00000494333 C3orf20Q8ND61 904 aa8.23□□□□□ -1.09
RIF1-211ENST00000494333 OR2A12Q8NGT7 310 aa8.23□□□□□ -1.09
RIF1-211ENST00000494333 FAM172AQ8WUF8 416 aa8.23□□□□□ -1.09
RIF1-211ENST00000494333 CENPIQ92674 756 aaPredicted RBP8.23□□□□□ -1.09
RIF1-211ENST00000494333 SKA1Q96BD8 255 aa8.23□□□□□ -1.09
RIF1-211ENST00000494333 SERAC1Q96JX3 654 aa8.23□□□□□ -1.09
RIF1-211ENST00000494333 CCDC114Q96M63 670 aa8.23□□□□□ -1.09
RIF1-211ENST00000494333 NAP1L5Q96NT1 182 aaPredicted RBP8.23□□□□□ -1.09
RIF1-211ENST00000494333 ZFYVE21Q9BQ24 234 aa8.23□□□□□ -1.09
RIF1-211ENST00000494333 SCNM1Q9BWG6 230 aa8.23□□□□□ -1.09
RIF1-211ENST00000494333 ACE2Q9BYF1 805 aaPredicted RBP8.23□□□□□ -1.09
RIF1-211ENST00000494333 AASDHPPTQ9NRN7 309 aa8.23□□□□□ -1.09
RIF1-211ENST00000494333 ZNF212Q9UDV6 495 aa8.23□□□□□ -1.09
RIF1-211ENST00000494333 WASF3Q9UPY6 502 aa8.23□□□□□ -1.09
RIF1-211ENST00000494333 CNOT1A5YKK6 2376 aaKnown RBP8.23□□□□□ -1.09
RIF1-211ENST00000494333 CKAP5Q14008 2032 aa8.23□□□□□ -1.09
RIF1-211ENST00000494333 TNRC6BQ9UPQ9 1833 aaKnown RBP8.22□□□□□ -1.09
RIF1-211ENST00000494333 LRRC53A6NM62 1247 aa8.22□□□□□ -1.09
RIF1-211ENST00000494333 TMCO5BA8MYB1 307 aa8.22□□□□□ -1.09
RIF1-211ENST00000494333 KPNA3O00505 521 aaPredicted RBP8.22□□□□□ -1.09
RIF1-211ENST00000494333 WNT9AO14904 365 aa8.22□□□□□ -1.09
RIF1-211ENST00000494333 VILLO15195 856 aa8.22□□□□□ -1.09
RIF1-211ENST00000494333 SLC7A4O43246 635 aa8.22□□□□□ -1.09
RIF1-211ENST00000494333 PLRG1O43660 514 aaKnown RBP8.22□□□□□ -1.09
RIF1-211ENST00000494333 ZMPSTE24O75844 475 aa8.22□□□□□ -1.09
RIF1-211ENST00000494333 WNT1P04628 370 aa8.22□□□□□ -1.09
RIF1-211ENST00000494333 CTSLP07711 333 aa8.22□□□□□ -1.09
RIF1-211ENST00000494333 PLEKP08567 350 aaPredicted RBP8.22□□□□□ -1.09
RIF1-211ENST00000494333 CD38P28907 300 aa8.22□□□□□ -1.09
RIF1-211ENST00000494333 MAT2AP31153 395 aaKnown RBP8.22□□□□□ -1.09
RIF1-211ENST00000494333 DNA2P51530 1060 aa8.22□□□□□ -1.09
RIF1-211ENST00000494333 GSCP56915 257 aaPredicted RBP8.22□□□□□ -1.09
RIF1-211ENST00000494333 RPL7AP62424 266 aaKnown RBP8.22□□□□□ -1.09
RIF1-211ENST00000494333 PPP2CBP62714 309 aa8.22□□□□□ -1.09
RIF1-211ENST00000494333 PPP2CAP67775 309 aa8.22□□□□□ -1.09
RIF1-211ENST00000494333 SLC20A2Q08357 652 aa8.22□□□□□ -1.09
RIF1-211ENST00000494333 CCDC15Q0P6D6 951 aa8.22□□□□□ -1.09
RIF1-211ENST00000494333 DNAJC24Q6P3W2 148 aa8.22□□□□□ -1.09
RIF1-211ENST00000494333 DCUN1D2Q6PH85 259 aa8.22□□□□□ -1.09
RIF1-211ENST00000494333 PAQR3Q6TCH7 311 aa8.22□□□□□ -1.09
RIF1-211ENST00000494333 ZNF783Q6ZMS7 281 aa8.22□□□□□ -1.09
RIF1-211ENST00000494333 DPY19L3Q6ZPD9 716 aa8.22□□□□□ -1.09
RIF1-211ENST00000494333 PRPF39Q86UA1 669 aaKnown RBP8.22□□□□□ -1.09
RIF1-211ENST00000494333 JAZF1Q86VZ6 243 aa8.22□□□□□ -1.09
RIF1-211ENST00000494333 MCOLN2Q8IZK6 566 aa8.22□□□□□ -1.09
RIF1-211ENST00000494333 CHCHD4Q8N4Q1 142 aa8.22□□□□□ -1.09
RIF1-211ENST00000494333 PNPLA1Q8N8W4 532 aa8.22□□□□□ -1.09
RIF1-211ENST00000494333 CHST14Q8NCH0 376 aa8.22□□□□□ -1.09
RIF1-211ENST00000494333 TMIEQ8NEW7 156 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms