RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 TMPRSS4Q9NRS4 437 aa19.16■□□□□ 0.66
COL27A1-207ENST00000494090 CHKBQ9Y259 395 aa19.16■□□□□ 0.66
COL27A1-207ENST00000494090 COQ6Q9Y2Z9 468 aa19.16■□□□□ 0.66
COL27A1-207ENST00000494090 AGPSO00116 658 aa19.15■□□□□ 0.66
COL27A1-207ENST00000494090 TSC22D2O75157 780 aa19.15■□□□□ 0.66
COL27A1-207ENST00000494090 ROR2Q01974 943 aaKnown RBP19.15■□□□□ 0.66
COL27A1-207ENST00000494090 KCTD21Q4G0X4 260 aa19.15■□□□□ 0.66
COL27A1-207ENST00000494090 ARHGAP36Q6ZRI8 547 aa19.15■□□□□ 0.66
COL27A1-207ENST00000494090 ANKRD23Q86SG2 305 aa19.15■□□□□ 0.66
COL27A1-207ENST00000494090 ADCY4Q8NFM4 1077 aa19.15■□□□□ 0.66
COL27A1-207ENST00000494090 RNASE11Q8TAA1 199 aaKnown RBP19.15■□□□□ 0.66
COL27A1-207ENST00000494090 BTN2A3PQ96KV6 586 aa19.15■□□□□ 0.66
COL27A1-207ENST00000494090 AK5Q9Y6K8 562 aa19.15■□□□□ 0.66
COL27A1-207ENST00000494090 IGLV3-22A0A075B6J6 115 aa19.15■□□□□ 0.66
COL27A1-207ENST00000494090 PAGE1O75459 146 aa19.15■□□□□ 0.66
COL27A1-207ENST00000494090 SLC22A3O75751 556 aa19.15■□□□□ 0.66
COL27A1-207ENST00000494090 DNTTP04053 509 aa19.15■□□□□ 0.66
COL27A1-207ENST00000494090 TPP2P29144 1249 aaPredicted RBP19.15■□□□□ 0.66
COL27A1-207ENST00000494090 SLC7A2P52569 658 aa19.15■□□□□ 0.66
COL27A1-207ENST00000494090 MTAPQ13126 283 aa19.15■□□□□ 0.66
COL27A1-207ENST00000494090 TOMM20Q15388 145 aa19.15■□□□□ 0.66
COL27A1-207ENST00000494090 RFX4Q33E94 735 aa19.15■□□□□ 0.66
COL27A1-207ENST00000494090 SCIMPQ6UWF3 145 aa19.15■□□□□ 0.66
COL27A1-207ENST00000494090 APTXQ7Z2E3 356 aaKnown RBP19.15■□□□□ 0.66
COL27A1-207ENST00000494090 KLHL23Q8NBE8 558 aa19.15■□□□□ 0.66
COL27A1-207ENST00000494090 PTCD2Q8WV60 388 aaKnown RBP19.15■□□□□ 0.66
COL27A1-207ENST00000494090 WDR60Q8WVS4 1066 aa19.15■□□□□ 0.66
COL27A1-207ENST00000494090 TTLL2Q9BWV7 592 aa19.15■□□□□ 0.66
COL27A1-207ENST00000494090 PLGRKTQ9HBL7 147 aa19.15■□□□□ 0.66
COL27A1-207ENST00000494090 MYO5BQ9ULV0 1848 aa19.15■□□□□ 0.66
COL27A1-207ENST00000494090 NRP2O60462 931 aa19.15■□□□□ 0.66
COL27A1-207ENST00000494090 CCR3P51677 355 aa19.15■□□□□ 0.66
COL27A1-207ENST00000494090 GALNT3Q14435 633 aa19.15■□□□□ 0.66
COL27A1-207ENST00000494090 RGS21Q2M5E4 152 aa19.15■□□□□ 0.66
COL27A1-207ENST00000494090 PARP15Q460N3 678 aa19.15■□□□□ 0.66
COL27A1-207ENST00000494090 RINLQ6ZS11 566 aa19.15■□□□□ 0.66
COL27A1-207ENST00000494090 REXO5Q96IC2 774 aaKnown RBP19.15■□□□□ 0.66
COL27A1-207ENST00000494090 NXF3Q9H4D5 531 aaKnown RBP19.15■□□□□ 0.66
COL27A1-207ENST00000494090 ZFYVE1Q9HBF4 777 aa19.15■□□□□ 0.66
COL27A1-207ENST00000494090 INTS7Q9NVH2 962 aaKnown RBP19.15■□□□□ 0.66
COL27A1-207ENST00000494090 NOCTQ9UK39 431 aaKnown RBP19.15■□□□□ 0.66
COL27A1-207ENST00000494090 MDM4O15151 490 aa19.15■□□□□ 0.66
COL27A1-207ENST00000494090 CXCL14O95715 111 aa19.15■□□□□ 0.66
COL27A1-207ENST00000494090 HNMTP50135 292 aa19.15■□□□□ 0.66
COL27A1-207ENST00000494090 AMER2Q8N7J2 671 aa19.15■□□□□ 0.66
COL27A1-207ENST00000494090 CLP1Q92989 425 aaKnown RBP19.15■□□□□ 0.66
COL27A1-207ENST00000494090 LINGO1Q96FE5 620 aa19.15■□□□□ 0.66
COL27A1-207ENST00000494090 ITCHQ96J02 903 aa19.15■□□□□ 0.66
COL27A1-207ENST00000494090 ISM1B1AKI9 464 aa19.15■□□□□ 0.66
COL27A1-207ENST00000494090 FAM155BO75949 473 aa19.15■□□□□ 0.66
COL27A1-207ENST00000494090 ELFN1P0C7U0 828 aa19.15■□□□□ 0.66
COL27A1-207ENST00000494090 FITM2Q8N6M3 262 aa19.15■□□□□ 0.66
COL27A1-207ENST00000494090 ZNF607Q96SK3 696 aa19.15■□□□□ 0.66
COL27A1-207ENST00000494090 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.15■□□□□ 0.66
COL27A1-207ENST00000494090 SLC27A5Q9Y2P5 690 aa19.15■□□□□ 0.66
COL27A1-207ENST00000494090 TLL1O43897 1013 aa19.14■□□□□ 0.66
COL27A1-207ENST00000494090 PIRTP0C851 137 aa19.14■□□□□ 0.66
COL27A1-207ENST00000494090 MPSTP25325 297 aa19.14■□□□□ 0.66
COL27A1-207ENST00000494090 PSMD4P55036 377 aaKnown RBP19.14■□□□□ 0.66
COL27A1-207ENST00000494090 MPPE1Q53F39 396 aa19.14■□□□□ 0.66
COL27A1-207ENST00000494090 METTL21CQ5VZV1 264 aa19.14■□□□□ 0.66
COL27A1-207ENST00000494090 SPATA19Q7Z5L4 167 aa19.14■□□□□ 0.66
COL27A1-207ENST00000494090 ZC3H7AQ8IWR0 971 aaKnown RBP19.14■□□□□ 0.66
COL27A1-207ENST00000494090 MYO19Q96H55 970 aa19.14■□□□□ 0.66
COL27A1-207ENST00000494090 NPAS2Q99743 824 aa19.14■□□□□ 0.66
COL27A1-207ENST00000494090 DMAC2Q9NW81 257 aa19.14■□□□□ 0.66
COL27A1-207ENST00000494090 CRNNQ9UBG3 495 aaPredicted RBP19.14■□□□□ 0.66
COL27A1-207ENST00000494090 AP3D1O14617 1153 aa19.14■□□□□ 0.65
COL27A1-207ENST00000494090 BMP7P18075 431 aa19.14■□□□□ 0.65
COL27A1-207ENST00000494090 GPAT3Q53EU6 434 aa19.14■□□□□ 0.65
COL27A1-207ENST00000494090 DENND6AQ8IWF6 608 aa19.14■□□□□ 0.65
COL27A1-207ENST00000494090 CHPFQ8IZ52 775 aa19.14■□□□□ 0.65
COL27A1-207ENST00000494090 SMYD1Q8NB12 490 aa19.14■□□□□ 0.65
COL27A1-207ENST00000494090 SDCBP2Q9H190 292 aa19.14■□□□□ 0.65
COL27A1-207ENST00000494090 MAGEL2Q9UJ55 1249 aa19.14■□□□□ 0.65
COL27A1-207ENST00000494090 PCDHB1Q9Y5F3 818 aa19.14■□□□□ 0.65
COL27A1-207ENST00000494090 TAPT1Q6NXT6 567 aa19.14■□□□□ 0.65
COL27A1-207ENST00000494090 ZNF572Q7Z3I7 529 aaPredicted RBP19.14■□□□□ 0.65
COL27A1-207ENST00000494090 NETO2Q8NC67 525 aa19.14■□□□□ 0.65
COL27A1-207ENST00000494090 TRIM63Q969Q1 353 aa19.14■□□□□ 0.65
COL27A1-207ENST00000494090 MCM8Q9UJA3 840 aa19.14■□□□□ 0.65
COL27A1-207ENST00000494090 LOC100506127A0A0U1RQW1 187 aa19.14■□□□□ 0.65
COL27A1-207ENST00000494090 H3BNH8 94 aa19.14■□□□□ 0.65
COL27A1-207ENST00000494090 MFSD11O43934 449 aa19.14■□□□□ 0.65
COL27A1-207ENST00000494090 SLC25A12O75746 678 aa19.14■□□□□ 0.65
COL27A1-207ENST00000494090 USP46P62068 366 aa19.14■□□□□ 0.65
COL27A1-207ENST00000494090 TARBP2Q15633 366 aaKnown RBP19.14■□□□□ 0.65
COL27A1-207ENST00000494090 ZNF540Q8NDQ6 660 aa19.14■□□□□ 0.65
COL27A1-207ENST00000494090 RBM15BQ8NDT2 890 aaKnown RBP19.14■□□□□ 0.65
COL27A1-207ENST00000494090 ZNF248Q8NDW4 579 aa19.14■□□□□ 0.65
COL27A1-207ENST00000494090 IRGQQ8WZA9 623 aa19.14■□□□□ 0.65
COL27A1-207ENST00000494090 KLHL31Q9H511 634 aa19.14■□□□□ 0.65
COL27A1-207ENST00000494090 C8orf4Q9NR00 106 aa19.14■□□□□ 0.65
COL27A1-207ENST00000494090 GALNT8Q9NY28 637 aa19.14■□□□□ 0.65
COL27A1-207ENST00000494090 MRPL39Q9NYK5 338 aaKnown RBP19.14■□□□□ 0.65
COL27A1-207ENST00000494090 IKZF3Q9UKT9 509 aa19.14■□□□□ 0.65
COL27A1-207ENST00000494090 SPATA2Q9UM82 520 aa19.14■□□□□ 0.65
COL27A1-207ENST00000494090 LYVE1Q9Y5Y7 322 aa19.14■□□□□ 0.65
COL27A1-207ENST00000494090 PLIN4Q96Q06 1357 aa19.13■□□□□ 0.65
COL27A1-207ENST00000494090 SLC25A14O95258 325 aaPredicted RBP19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms