RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 MNX1P50219 401 aaPredicted RBP13.79□□□□□ -0.2
VCP-207ENST00000493886 NUDT2P50583 147 aa13.79□□□□□ -0.2
VCP-207ENST00000493886 RPL14P50914 215 aaKnown RBP13.79□□□□□ -0.2
VCP-207ENST00000493886 ZNF177Q13360 481 aaPredicted RBP13.79□□□□□ -0.2
VCP-207ENST00000493886 FAM83EQ2M2I3 478 aa13.79□□□□□ -0.2
VCP-207ENST00000493886 ADGRF1Q5T601 910 aa13.79□□□□□ -0.2
VCP-207ENST00000493886 BRSK1Q8TDC3 778 aa13.79□□□□□ -0.2
VCP-207ENST00000493886 PEX13Q92968 403 aa13.79□□□□□ -0.2
VCP-207ENST00000493886 WBP2Q969T9 261 aa13.79□□□□□ -0.2
VCP-207ENST00000493886 DNAJC1Q96KC8 554 aaKnown RBP13.79□□□□□ -0.2
VCP-207ENST00000493886 ZNF558Q96NG5 402 aa13.79□□□□□ -0.2
VCP-207ENST00000493886 AGO1Q9UL18 857 aaKnown RBP13.79□□□□□ -0.2
VCP-207ENST00000493886 VWA7Q9Y334 891 aa13.79□□□□□ -0.2
VCP-207ENST00000493886 BOLA2-SMG1P6H3BVE0 249 aa13.78□□□□□ -0.2
VCP-207ENST00000493886 MATN2O00339 956 aa13.78□□□□□ -0.2
VCP-207ENST00000493886 TSPAN3O60637 253 aa13.78□□□□□ -0.2
VCP-207ENST00000493886 NDST3O95803 873 aa13.78□□□□□ -0.2
VCP-207ENST00000493886 PIRTP0C851 137 aa13.78□□□□□ -0.2
VCP-207ENST00000493886 COX4I1P13073 169 aa13.78□□□□□ -0.2
VCP-207ENST00000493886 RGRP47804 291 aa13.78□□□□□ -0.2
VCP-207ENST00000493886 PRKAA1Q13131 559 aa13.78□□□□□ -0.2
VCP-207ENST00000493886 PTPRCAPQ14761 206 aa13.78□□□□□ -0.2
VCP-207ENST00000493886 VEPH1Q14D04 833 aa13.78□□□□□ -0.2
VCP-207ENST00000493886 TMEM198Q66K66 360 aa13.78□□□□□ -0.2
VCP-207ENST00000493886 FAM117BQ6P1L5 589 aa13.78□□□□□ -0.2
VCP-207ENST00000493886 CHST9Q7L1S5 443 aa13.78□□□□□ -0.2
VCP-207ENST00000493886 TMCO2Q7Z6W1 182 aaPredicted RBP13.78□□□□□ -0.2
VCP-207ENST00000493886 SLC39A11Q8N1S5 342 aa13.78□□□□□ -0.2
VCP-207ENST00000493886 GALNT15Q8N3T1 639 aa13.78□□□□□ -0.2
VCP-207ENST00000493886 SGF29Q96ES7 293 aa13.78□□□□□ -0.2
VCP-207ENST00000493886 TRMT2BQ96GJ1 504 aaKnown RBP13.78□□□□□ -0.2
VCP-207ENST00000493886 LENG8Q96PV6 779 aaPredicted RBP13.78□□□□□ -0.2
VCP-207ENST00000493886 TRIB3Q96RU7 358 aa13.78□□□□□ -0.2
VCP-207ENST00000493886 KLF16Q9BXK1 252 aaPredicted RBP13.78□□□□□ -0.2
VCP-207ENST00000493886 GPAMQ9HCL2 828 aa13.78□□□□□ -0.2
VCP-207ENST00000493886 TBX21Q9UL17 535 aa13.78□□□□□ -0.2
VCP-207ENST00000493886 A0A1B0GVM2 712 aa13.78□□□□□ -0.2
VCP-207ENST00000493886 TCAF2A6NFQ2 919 aa13.78□□□□□ -0.2
VCP-207ENST00000493886 CFLARO15519 480 aa13.78□□□□□ -0.2
VCP-207ENST00000493886 FKBP6O75344 327 aa13.78□□□□□ -0.2
VCP-207ENST00000493886 SLC14A2Q15849 920 aa13.78□□□□□ -0.2
VCP-207ENST00000493886 AGAP9Q5VTM2 703 aa13.78□□□□□ -0.2
VCP-207ENST00000493886 C16orf59Q7L2K0 433 aa13.78□□□□□ -0.2
VCP-207ENST00000493886 SETD3Q86TU7 594 aaPredicted RBP13.78□□□□□ -0.2
VCP-207ENST00000493886 RNF135Q8IUD6 432 aa13.78□□□□□ -0.2
VCP-207ENST00000493886 LSMEM2Q8N112 164 aa13.78□□□□□ -0.2
VCP-207ENST00000493886 TXNDC5Q8NBS9 432 aaKnown RBP13.78□□□□□ -0.2
VCP-207ENST00000493886 TOP1MTQ969P6 601 aa13.78□□□□□ -0.2
VCP-207ENST00000493886 CMTM5Q96DZ9 223 aa13.78□□□□□ -0.2
VCP-207ENST00000493886 HDAC3O15379 428 aa13.77□□□□□ -0.2
VCP-207ENST00000493886 GOT2P00505 430 aaKnown RBP13.77□□□□□ -0.2
VCP-207ENST00000493886 LTA4HP09960 611 aaKnown RBP13.77□□□□□ -0.2
VCP-207ENST00000493886 CCDC166P0CW27 439 aa13.77□□□□□ -0.2
VCP-207ENST00000493886 TFEBP19484 476 aa13.77□□□□□ -0.2
VCP-207ENST00000493886 KLF10Q13118 480 aa13.77□□□□□ -0.2
VCP-207ENST00000493886 TECRLQ5HYJ1 363 aa13.77□□□□□ -0.2
VCP-207ENST00000493886 FAM219BQ5XKK7 198 aa13.77□□□□□ -0.2
VCP-207ENST00000493886 SEL1L3Q68CR1 1132 aa13.77□□□□□ -0.2
VCP-207ENST00000493886 NXNQ6DKJ4 435 aa13.77□□□□□ -0.2
VCP-207ENST00000493886 CCNYL1Q8N7R7 359 aa13.77□□□□□ -0.2
VCP-207ENST00000493886 OR13C4Q8NGS5 318 aa13.77□□□□□ -0.2
VCP-207ENST00000493886 USP13Q92995 863 aaPredicted RBP13.77□□□□□ -0.2
VCP-207ENST00000493886 EXOC2Q96KP1 924 aa13.77□□□□□ -0.2
VCP-207ENST00000493886 NSMCE3Q96MG7 304 aa13.77□□□□□ -0.2
VCP-207ENST00000493886 HERC2P3Q9BVR0 1158 aa13.77□□□□□ -0.2
VCP-207ENST00000493886 NUF2Q9BZD4 464 aa13.77□□□□□ -0.2
VCP-207ENST00000493886 ZDHHC2Q9UIJ5 367 aa13.77□□□□□ -0.2
VCP-207ENST00000493886 SSX2IPQ9Y2D8 614 aa13.77□□□□□ -0.2
VCP-207ENST00000493886 PRRG1O14668 218 aa13.77□□□□□ -0.21
VCP-207ENST00000493886 CCNT2O60583 730 aaKnown RBP13.77□□□□□ -0.21
VCP-207ENST00000493886 RPP40O75818 363 aaKnown RBP13.77□□□□□ -0.21
VCP-207ENST00000493886 GLP2RO95838 553 aa13.77□□□□□ -0.21
VCP-207ENST00000493886 JUNP05412 331 aaKnown RBP13.77□□□□□ -0.21
VCP-207ENST00000493886 ATP5F1P24539 256 aaPredicted RBP13.77□□□□□ -0.21
VCP-207ENST00000493886 HK2P52789 917 aa13.77□□□□□ -0.21
VCP-207ENST00000493886 PKNOX1P55347 436 aa13.77□□□□□ -0.21
VCP-207ENST00000493886 TWF1Q12792 350 aa13.77□□□□□ -0.21
VCP-207ENST00000493886 RFTN1Q14699 578 aaPredicted RBP13.77□□□□□ -0.21
VCP-207ENST00000493886 SNX32Q86XE0 403 aa13.77□□□□□ -0.21
VCP-207ENST00000493886 ZNF689Q96CS4 500 aaPredicted RBP13.77□□□□□ -0.21
VCP-207ENST00000493886 GCNAQ96QF7 691 aa13.77□□□□□ -0.21
VCP-207ENST00000493886 POMKQ9H5K3 350 aa13.77□□□□□ -0.21
VCP-207ENST00000493886 TCF7L2Q9NQB0 619 aa13.77□□□□□ -0.21
VCP-207ENST00000493886 SMPD4Q9NXE4 827 aa13.77□□□□□ -0.21
VCP-207ENST00000493886 RIMKLBQ9ULI2 386 aa13.77□□□□□ -0.21
VCP-207ENST00000493886 ATP11BQ9Y2G3 1177 aa13.77□□□□□ -0.21
VCP-207ENST00000493886 TBC1D30Q9Y2I9 924 aa13.77□□□□□ -0.21
VCP-207ENST00000493886 CRYL1Q9Y2S2 319 aa13.77□□□□□ -0.21
VCP-207ENST00000493886 FIS1Q9Y3D6 152 aa13.77□□□□□ -0.21
VCP-207ENST00000493886 ANAPC1Q9H1A4 1944 aa13.77□□□□□ -0.21
VCP-207ENST00000493886 CCDC162PA2VCL2 907 aa13.77□□□□□ -0.21
VCP-207ENST00000493886 CAPN8A6NHC0 703 aa13.77□□□□□ -0.21
VCP-207ENST00000493886 CBX4O00257 560 aa13.77□□□□□ -0.21
VCP-207ENST00000493886 CD3EAPO15446 510 aaKnown RBP13.77□□□□□ -0.21
VCP-207ENST00000493886 INSIG1O15503 277 aa13.77□□□□□ -0.21
VCP-207ENST00000493886 CR2P20023 1033 aa13.77□□□□□ -0.21
VCP-207ENST00000493886 CDKN2DP55273 166 aa13.77□□□□□ -0.21
VCP-207ENST00000493886 RAB33AQ14088 237 aa13.77□□□□□ -0.21
VCP-207ENST00000493886 FSCBQ5H9T9 825 aa13.77□□□□□ -0.21
VCP-207ENST00000493886 METTL21CQ5VZV1 264 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms