RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 DDNO94850 711 aaPredicted RBP4.25□□□□□ -1.73
ITGB1-216ENST00000493758 SEC31AO94979 1220 aaKnown RBP4.25□□□□□ -1.73
ITGB1-216ENST00000493758 AGR2O95994 175 aa4.25□□□□□ -1.73
ITGB1-216ENST00000493758 CLEC3BP05452 202 aa4.25□□□□□ -1.73
ITGB1-216ENST00000493758 S1PR1P21453 382 aa4.25□□□□□ -1.73
ITGB1-216ENST00000493758 PSMA4P25789 261 aaKnown RBP4.25□□□□□ -1.73
ITGB1-216ENST00000493758 CTCFP49711 727 aaPredicted RBP4.25□□□□□ -1.73
ITGB1-216ENST00000493758 NAE1Q13564 534 aa4.25□□□□□ -1.73
ITGB1-216ENST00000493758 DRAP1Q14919 205 aaPredicted RBP4.25□□□□□ -1.73
ITGB1-216ENST00000493758 CCNG2Q16589 344 aa4.25□□□□□ -1.73
ITGB1-216ENST00000493758 EIF2S3LQ2VIR3 472 aaKnown RBP4.25□□□□□ -1.73
ITGB1-216ENST00000493758 FAM76BQ5HYJ3 339 aa4.25□□□□□ -1.73
ITGB1-216ENST00000493758 CXorf66Q5JRM2 361 aaPredicted RBP4.25□□□□□ -1.73
ITGB1-216ENST00000493758 TRNP1Q6NT89 227 aa4.25□□□□□ -1.73
ITGB1-216ENST00000493758 C1orf87Q8N0U7 546 aa4.25□□□□□ -1.73
ITGB1-216ENST00000493758 ZNF441Q8N8Z8 693 aa4.25□□□□□ -1.73
ITGB1-216ENST00000493758 KCNH5Q8NCM2 988 aa4.25□□□□□ -1.73
ITGB1-216ENST00000493758 OR2AK2Q8NG84 335 aa4.25□□□□□ -1.73
ITGB1-216ENST00000493758 METTL6Q8TCB7 284 aa4.25□□□□□ -1.73
ITGB1-216ENST00000493758 SECTM1Q8WVN6 248 aa4.25□□□□□ -1.73
ITGB1-216ENST00000493758 TMEM19Q96HH6 336 aa4.25□□□□□ -1.73
ITGB1-216ENST00000493758 PPP1R13BQ96KQ4 1090 aa4.25□□□□□ -1.73
ITGB1-216ENST00000493758 C1QTNF5Q9BXJ0 243 aa4.25□□□□□ -1.73
ITGB1-216ENST00000493758 RETREG1Q9H6L5 497 aa4.25□□□□□ -1.73
ITGB1-216ENST00000493758 SCPEP1Q9HB40 452 aa4.25□□□□□ -1.73
ITGB1-216ENST00000493758 AMDHD2Q9Y303 409 aa4.25□□□□□ -1.73
ITGB1-216ENST00000493758 CEPT1Q9Y6K0 416 aa4.25□□□□□ -1.73
ITGB1-216ENST00000493758 LILRA5A6NI73 299 aa4.24□□□□□ -1.73
ITGB1-216ENST00000493758 IFITM10A6NMD0 228 aa4.24□□□□□ -1.73
ITGB1-216ENST00000493758 PRAC2D3DTV9 90 aa4.24□□□□□ -1.73
ITGB1-216ENST00000493758 TGFB1I1O43294 461 aa4.24□□□□□ -1.73
ITGB1-216ENST00000493758 DGKAP23743 735 aa4.24□□□□□ -1.73
ITGB1-216ENST00000493758 PIP4K2AP48426 406 aaPredicted RBP4.24□□□□□ -1.73
ITGB1-216ENST00000493758 CASP6P55212 293 aa4.24□□□□□ -1.73
ITGB1-216ENST00000493758 OLR1P78380 273 aa4.24□□□□□ -1.73
ITGB1-216ENST00000493758 TBX2Q13207 712 aaPredicted RBP4.24□□□□□ -1.73
ITGB1-216ENST00000493758 SLC45A4Q5BKX6 768 aa4.24□□□□□ -1.73
ITGB1-216ENST00000493758 KCNT1Q5JUK3 1230 aa4.24□□□□□ -1.73
ITGB1-216ENST00000493758 WDR73Q6P4I2 378 aa4.24□□□□□ -1.73
ITGB1-216ENST00000493758 GFRALQ6UXV0 394 aa4.24□□□□□ -1.73
ITGB1-216ENST00000493758 FOXL2NBQ6ZUU3 175 aa4.24□□□□□ -1.73
ITGB1-216ENST00000493758 DPPA4Q7L190 304 aa4.24□□□□□ -1.73
ITGB1-216ENST00000493758 ZNF771Q7L3S4 317 aaPredicted RBP4.24□□□□□ -1.73
ITGB1-216ENST00000493758 SMIM29Q86T20 159 aa4.24□□□□□ -1.73
ITGB1-216ENST00000493758 GTF3C6Q969F1 213 aa4.24□□□□□ -1.73
ITGB1-216ENST00000493758 FEM1CQ96JP0 617 aa4.24□□□□□ -1.73
ITGB1-216ENST00000493758 C7orf26Q96N11 449 aa4.24□□□□□ -1.73
ITGB1-216ENST00000493758 CSF3RQ99062 836 aa4.24□□□□□ -1.73
ITGB1-216ENST00000493758 PIP5K1AQ99755 562 aa4.24□□□□□ -1.73
ITGB1-216ENST00000493758 PLEKHA5Q9HAU0 1116 aa4.24□□□□□ -1.73
ITGB1-216ENST00000493758 GPR108Q9NPR9 543 aa4.24□□□□□ -1.73
ITGB1-216ENST00000493758 ZNF69Q9UC07 566 aa4.24□□□□□ -1.73
ITGB1-216ENST00000493758 MALT1Q9UDY8 824 aa4.24□□□□□ -1.73
ITGB1-216ENST00000493758 ACSL5Q9ULC5 683 aa4.24□□□□□ -1.73
ITGB1-216ENST00000493758 TTC7AQ9ULT0 858 aaPredicted RBP4.24□□□□□ -1.73
ITGB1-216ENST00000493758 SCN5AQ14524 2016 aa4.23□□□□□ -1.73
ITGB1-216ENST00000493758 A0A1W2PPH5 198 aa4.23□□□□□ -1.73
ITGB1-216ENST00000493758 CCDC189A1A4V9 331 aa4.23□□□□□ -1.73
ITGB1-216ENST00000493758 HNRNPCL2B2RXH8 293 aa4.23□□□□□ -1.73
ITGB1-216ENST00000493758 CLGNO14967 610 aa4.23□□□□□ -1.73
ITGB1-216ENST00000493758 ZNF432O94892 652 aa4.23□□□□□ -1.73
ITGB1-216ENST00000493758 G6PDP11413 515 aa4.23□□□□□ -1.73
ITGB1-216ENST00000493758 UBL4AP11441 157 aa4.23□□□□□ -1.73
ITGB1-216ENST00000493758 ICAM3P32942 547 aa4.23□□□□□ -1.73
ITGB1-216ENST00000493758 HARS2P49590 506 aaKnown RBP4.23□□□□□ -1.73
ITGB1-216ENST00000493758 CSNK2A1P68400 391 aaPredicted RBP4.23□□□□□ -1.73
ITGB1-216ENST00000493758 ZBED6P86452 979 aa4.23□□□□□ -1.73
ITGB1-216ENST00000493758 SORDQ00796 357 aa4.23□□□□□ -1.73
ITGB1-216ENST00000493758 CSTF3Q12996 717 aaKnown RBP4.23□□□□□ -1.73
ITGB1-216ENST00000493758 DPCR1Q3MIW9 517 aa4.23□□□□□ -1.73
ITGB1-216ENST00000493758 HIST2H2BCQ6DN03 193 aa4.23□□□□□ -1.73
ITGB1-216ENST00000493758 HIST2H2BDQ6DRA6 164 aa4.23□□□□□ -1.73
ITGB1-216ENST00000493758 BRAT1Q6PJG6 821 aa4.23□□□□□ -1.73
ITGB1-216ENST00000493758 SLC36A4Q6YBV0 504 aa4.23□□□□□ -1.73
ITGB1-216ENST00000493758 Q6ZTC4 211 aa4.23□□□□□ -1.73
ITGB1-216ENST00000493758 SATL1Q86VE3 508 aa4.23□□□□□ -1.73
ITGB1-216ENST00000493758 SFR1Q86XK3 245 aa4.23□□□□□ -1.73
ITGB1-216ENST00000493758 NRROSQ86YC3 692 aa4.23□□□□□ -1.73
ITGB1-216ENST00000493758 MUC20Q8N307 709 aaPredicted RBP4.23□□□□□ -1.73
ITGB1-216ENST00000493758 PCDH20Q8N6Y1 951 aaKnown RBP4.23□□□□□ -1.73
ITGB1-216ENST00000493758 CSNK2A3Q8NEV1 391 aa4.23□□□□□ -1.73
ITGB1-216ENST00000493758 THAP6Q8TBB0 222 aa4.23□□□□□ -1.73
ITGB1-216ENST00000493758 TAAR8Q969N4 342 aa4.23□□□□□ -1.73
ITGB1-216ENST00000493758 LMLNQ96KR4 655 aa4.23□□□□□ -1.73
ITGB1-216ENST00000493758 ACOX2Q99424 681 aa4.23□□□□□ -1.73
ITGB1-216ENST00000493758 USP44Q9H0E7 712 aa4.23□□□□□ -1.73
ITGB1-216ENST00000493758 UBA2Q9UBT2 640 aaPredicted RBP4.23□□□□□ -1.73
ITGB1-216ENST00000493758 CAMK2AQ9UQM7 478 aa4.23□□□□□ -1.73
ITGB1-216ENST00000493758 A0A1W2PS18 150 aa4.22□□□□□ -1.73
ITGB1-216ENST00000493758 B4E171 279 aa4.22□□□□□ -1.73
ITGB1-216ENST00000493758 CCNDBP1O95273 360 aa4.22□□□□□ -1.73
ITGB1-216ENST00000493758 HLA-DOBP13765 273 aa4.22□□□□□ -1.73
ITGB1-216ENST00000493758 ZNF182P17025 639 aaPredicted RBP4.22□□□□□ -1.73
ITGB1-216ENST00000493758 AMD1P17707 334 aa4.22□□□□□ -1.73
ITGB1-216ENST00000493758 ANOS1P23352 680 aa4.22□□□□□ -1.73
ITGB1-216ENST00000493758 BDKRB2P30411 391 aa4.22□□□□□ -1.73
ITGB1-216ENST00000493758 ELF1P32519 619 aa4.22□□□□□ -1.73
ITGB1-216ENST00000493758 UBA7P41226 1012 aa4.22□□□□□ -1.73
ITGB1-216ENST00000493758 TSPAN7P41732 249 aa4.22□□□□□ -1.73
ITGB1-216ENST00000493758 CCR9P51686 369 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms